FFCP PHASE1:Mm9::chr7:17200307..17200370,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232906 | |EntrezGene=232906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | |UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8 | ||
|association_with_transcript=0bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | |association_with_transcript=0bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end | ||
|cluster_id=chr7:17200307..17200370,- | |||
|description=CAGE_peak_2_at_Grlf1_5end | |description=CAGE_peak_2_at_Grlf1_5end | ||
|id=chr7:17200307..17200370,- | |id=chr7:17200307..17200370,- | ||
|ontology_enrichment_celltype=CL:0000117!3.95e-13!23;CL:0000337!3.95e-13!23;CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000393!1.23e-07!39;CL:0000211!1.23e-07!39 | |ontology_enrichment_celltype=CL:0000117!3.95e-13!23;CL:0000337!3.95e-13!23;CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000393!1.23e-07!39;CL:0000211!1.23e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-13,23;CL:0000337,3.94e-13,23;CL:0000540,1.71e-11,33;CL:0000047,1.71e-11,33;CL:0000031,1.71e-11,33;CL:0000404,1.71e-11,33;CL:0000393,1.23e-07,39;CL:0000211,1.23e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.68e-25!63;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0001017!3.51e-23!73;UBERON:0005743!3.51e-23!73;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0000955!4.66e-22!50;UBERON:0006238!4.66e-22!50;UBERON:0004121!4.79e-22!102;UBERON:0000924!4.79e-22!102;UBERON:0006601!4.79e-22!102;UBERON:0003056!4.90e-22!49;UBERON:0000073!9.16e-22!75;UBERON:0001016!9.16e-22!75;UBERON:0002616!1.67e-21!49;UBERON:0003080!4.90e-19!40;UBERON:0002780!2.47e-18!39;UBERON:0001890!2.47e-18!39;UBERON:0006240!2.47e-18!39;UBERON:0002020!1.32e-17!34;UBERON:0000153!2.50e-15!94;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0007811!7.12e-14!86;UBERON:0000025!5.50e-12!114;UBERON:0004111!3.05e-11!122;UBERON:0000956!1.01e-10!21;UBERON:0001869!1.01e-10!21;UBERON:0000203!1.01e-10!21;UBERON:0000468!3.25e-09!333;UBERON:0002619!7.05e-09!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0000479!2.96e-07!349;UBERON:0000922!7.43e-07!328 | |ontology_enrichment_uberon=UBERON:0000033!3.68e-25!63;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0001017!3.51e-23!73;UBERON:0005743!3.51e-23!73;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0000955!4.66e-22!50;UBERON:0006238!4.66e-22!50;UBERON:0004121!4.79e-22!102;UBERON:0000924!4.79e-22!102;UBERON:0006601!4.79e-22!102;UBERON:0003056!4.90e-22!49;UBERON:0000073!9.16e-22!75;UBERON:0001016!9.16e-22!75;UBERON:0002616!1.67e-21!49;UBERON:0003080!4.90e-19!40;UBERON:0002780!2.47e-18!39;UBERON:0001890!2.47e-18!39;UBERON:0006240!2.47e-18!39;UBERON:0002020!1.32e-17!34;UBERON:0000153!2.50e-15!94;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0007811!7.12e-14!86;UBERON:0000025!5.50e-12!114;UBERON:0004111!3.05e-11!122;UBERON:0000956!1.01e-10!21;UBERON:0001869!1.01e-10!21;UBERON:0000203!1.01e-10!21;UBERON:0000468!3.25e-09!333;UBERON:0002619!7.05e-09!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0000479!2.96e-07!349;UBERON:0000922!7.43e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.94e-26,64;UBERON:0003075,9.94e-26,64;UBERON:0007284,9.94e-26,64;UBERON:0010314,1.12e-24,92;UBERON:0000073,4.13e-24,54;UBERON:0001017,3.49e-23,73;UBERON:0010371,7.43e-23,73;UBERON:0001049,1.25e-22,52;UBERON:0005068,1.25e-22,52;UBERON:0006241,1.25e-22,52;UBERON:0007135,1.25e-22,52;UBERON:0004121,2.02e-22,95;UBERON:0000924,2.02e-22,95;UBERON:0006601,2.02e-22,95;UBERON:0003056,4.87e-22,49;UBERON:0001016,9.11e-22,75;UBERON:0000955,6.39e-20,47;UBERON:0006238,6.39e-20,47;UBERON:0002616,2.23e-19,46;UBERON:0003080,4.88e-19,40;UBERON:0002780,2.46e-18,39;UBERON:0001890,2.46e-18,39;UBERON:0006240,2.46e-18,39;UBERON:0002020,1.32e-17,34;UBERON:0003528,3.21e-15,29;UBERON:0002791,3.21e-15,29;UBERON:0001893,3.21e-15,29;UBERON:0000025,5.49e-12,114;UBERON:0004111,3.04e-11,122;UBERON:0000956,1.00e-10,21;UBERON:0001869,1.00e-10,21;UBERON:0000203,1.00e-10,21;UBERON:0002619,7.03e-09,17;UBERON:0002021,9.28e-08,10;UBERON:0000411,9.28e-08,10;UBERON:0001950,9.28e-08,10;UBERON:0000479,3.49e-07,349 | |||
|phase1_expression=9.76907967339243,2.09385244583617,2.27499619694768,1.51232105653415,0,3.52546471014969,4.43864017131499,2.96983643915625,3.801295498095,3.7450324211519,5.13653904676515,4.54701306273417,4.45121897821135,3.3219752919219,0.999329285446988,1.61980213911861,1.39912375625629,3.3123527362615,2.19383093769182,3.81950686618227,9.18467533631554,3.47518329203099,1.30599894569468,1.43993180514066,1.60586496747019,1.14846392823004,2.15380998079537,2.15471232685889,2.28028103347649,0.756090389279792,1.55211357458713,3.81018404075779,3.69038872550742,0,4.62162591602039,2.49351968037739,3.26670970019791,0,0,0,0,0,0,4.28049181116963,4.76471576731718,2.0190142737785,3.12956537739216,1.74420125104357,3.73466510648602,7.97162586204562,4.4795654920116,2.87505128729943,3.85899993932794,3.62681071005672,7.05796978199174,2.57259436035947,2.86533439938757,1.54701627683233,29.7405197463609,29.6234948392338,22.8179305262225,1.69422266034566,1.77858959222228,0.899899717281399,3.9554654502679,0.7104801149461,1.19840044207362,4.99483796918021,17.8346133170582,16.2007125998029,13.2504725651371,17.9960120174396,11.9269012113871,16.9037302916637,17.6355666673555,20.2228133054205,39.6417171597799,42.9029455966231,38.2480267808046,29.5425284515634,28.6356324475542,30.2129754922921,33.5019598801657,36.0168070420275,31.4764390420229,24.1595440088408,20.6438937158699,26.2823218613674,3.7863096666592,2.79614772395106,4.05810284182349,1.72084775396277,4.75979933595425,9.17495425784289,10.3964226791627,7.6164570806547,5.33688796500657,2.89731548382698,1.81850203222008,1.7666978725517,8.02807492727079,1.28326477414318,2.54805239706646,0,1.94841936910093,1.26679932737549,2.02209778005913,5.36664234679582,3.6251303710604,9.35185476108396,5.37804512975021,7.91610243611567,4.61230994512117,4.97384713823654,8.34879820663504,6.53466274914312,4.94389935468748,6.79616977523585,2.65383165584962,10.5148452465816,6.8460870722722,4.363877278217,3.72783522436244,37.1831612204665,25.3430515244281,4.08731288333746,2.63593273913025,3.59941638596045,1.39777249780371,40.8928445575166,28.8225379775735,15.8324483662209,36.1554585999935,31.708716708961,30.1292664611362,27.5810147215188,6.61955865027056,5.10068579501381,4.29628689337247,9.6803253707778,10.0192741081282,8.27647575960503,10.803727788321,11.9056806090215,15.1041028115948,14.7330778327577,14.8048724804372,17.8505325809921,11.2095356325078,14.7502742530899,10.381116325673,11.1789823538063,13.3462679628287,10.7958171621872,5.35033554660653,7.96137067273973,2.1066395619397,0.772043721344145,1.70498099637356,5.79952163099405,7.73935997937617,7.20248245844059,7.57583153872673,9.44468312387538,7.0962871928194,9.30135779001631,14.2184902741798,7.82327793860036,8.3925523455875,7.05920095540109,9.40398190731926,11.5497990066013,10.3188554186794,11.541752013392,25.2347938276953,19.7576855768226,0.660837565967596,1.85115396664481,11.9441420299731,5.34144345279009,6.18563814346048,5.84882221407693,4.66993892074228,3.04361001780095,4.74529061544512,4.44687177754829,5.02670417600539,4.37704238490532,3.70431765526328,4.49409704327111,1.94524244887225,2.19055400579804,5.87970492954553,5.36968009265725,9.01661885384643,7.33144780243131,4.65485969202302,4.9095073923223,5.81776141543167,5.01874503130647,5.02395929092399,4.81248939295022,7.41131567717872,2.33583148002532,3.34150291692445,2.47348323623339,1.21716072833102,2.41177159752417,2.03700681425136,3.45235364940973,3.24270453550071,2.47105271869273,24.4405951096503,5.20997326735905,4.05648975048929,5.05157755894223,7.3552939543984,8.68398338454061,6.28160846566456,5.49525094134406,6.68156403412306,6.11082308790677,4.92849521405854,8.04030035720716,6.66522194480839,7.02481132288076,6.9359463406724,6.64394068946325,8.13219320153184,4.58817281204066,4.14443956478149,5.20736610893442,3.01582567878545,0.54390568381871,5.90117127622843,2.75936746304733,36.6055345172166,30.2406151407884,5.73772308818364,7.32165688892682,6.62567260774139,7.02789739733949,9.26320610251035,4.77937595905104,6.46116154838943,9.05844898524264,6.07216052512342,10.5212108848072,4.34816555741176,24.4204200480573,8.80028528291265,5.52003371368491,8.1443479676788,6.59880491890142,13.2745138339963,4.37005145078967,3.93020624054176,2.82907619633847,5.61073596473468,3.3817866273832,6.20227903603731,3.99887102425256,4.27796854061666,4.74055136903724,7.37930260024991,2.06271086496374,10.8940673841212,11.8840322060665,9.31382523235832,9.64516657642165,11.3497749531055,8.91844088010353,11.5184314421485,12.4830629136986,1.87737366450968,2.1183207086382,3.30792597082443,3.2977250588296,7.10443477461984,4.46315644468353,5.37175548014114,5.41664969158702,5.82961673259701,37.6413363081335,2.9048049735635,6.19160603889667,3.1483069652851,2.0720530270516,3.2806614653046,2.51655990527175,1.86976272993241,1.6794174278839,3.17859939750175,0.954670618015114,9.96458379780576,6.50622294805916,7.12835249423888,5.64538399239065,3.05707589244649,4.45052343069908,5.53778153359751,5.49687478166462,2.8515294124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| ||
|short_description=p2@Grlf1 | |short_description=p2@Grlf1 | ||
}} | }} |
Latest revision as of 07:08, 26 September 2015
Short description: | p2@Grlf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grlf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end |
EntrezGene: | Grlf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.94e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.94e-13 | 23 |
neuron | 1.71e-11 | 33 |
neuronal stem cell | 1.71e-11 | 33 |
neuroblast | 1.71e-11 | 33 |
electrically signaling cell | 1.71e-11 | 33 |
electrically responsive cell | 1.23e-07 | 39 |
electrically active cell | 1.23e-07 | 39 |