FFCP PHASE1:Mm9::chr1:127573708..127573719,+: Difference between revisions
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{{FFCP|EntrezGene=71111|HGNC=|MCL_coexpression_id=1028|UniProt=Q5U431|association_with_transcript=135bp_to_NM_027677,uc007ckh.2_5end|description=CAGE_peak_9_at_Gpr39_5end|id=chr1:127573708..127573719,+|ontology_enrichment_celltype=CL:0000680!1.53e-19!6;CL:0000183!1.53e-19!6;CL:0000187!1.53e-19!6;CL:0000056!1.53e-19!6;CL:0000222!1.18e-16!7;CL:0000355!8.44e-13!9;CL:0000192!7.13e-11!3;CL:0000359!7.13e-11!3;CL:0002539!7.13e-11!3;CL:0000514!7.13e-11!3;CL:0002494!2.61e-10!3;CL:0000737!2.61e-10!3;CL:0000746!2.61e-10!3;CL:0000513!2.61e-10!3|ontology_enrichment_celltype_v019_2=CL:0000192,3.27e-44,3;CL:0000359,3.27e-44,3;CL:0002539,3.27e-44,3;CL:0000514,3.27e-44,3;CL:0000680,5.90e-39,6;CL:0000187,5.90e-39,6;CL:0000056,5.90e-39,6;CL:0000222,1.65e-33,7;CL:0000355,3.07e-26,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000947!3.37e-13!4;UBERON:0001637!3.37e-13!4;UBERON:0003509!3.37e-13!4;UBERON:0004573!3.37e-13!4;UBERON:0004571!3.37e-13!4;UBERON:0010191!3.37e-13!4;UBERON:0004572!3.37e-13!4;UBERON:0001134!8.44e-13!9;UBERON:0002036!8.44e-13!9;UBERON:0002385!8.44e-13!9;UBERON:0000486!8.44e-13!9;UBERON:0001015!8.44e-13!9;UBERON:0004290!8.44e-13!9;UBERON:0003082!8.44e-13!9;UBERON:0004535!9.46e-12!23;UBERON:0001009!9.46e-12!23;UBERON:0000383!1.89e-11!10;UBERON:0001135!7.13e-11!3;UBERON:0004237!7.13e-11!3;UBERON:0004695!7.13e-11!3;UBERON:0002111!7.13e-11!3;UBERON:0004178!7.13e-11!3;UBERON:0000055!1.45e-10!5;UBERON:0001981!1.45e-10!5;UBERON:0002049!1.45e-10!5;UBERON:0007500!1.45e-10!5;UBERON:0007798!1.45e-10!5;UBERON:0004537!1.45e-10!5;UBERON:0006965!1.45e-10!5;UBERON:0002329!2.41e-10!11;UBERON:0003077!2.41e-10!11;UBERON:0003059!2.41e-10!11;UBERON:0007282!2.41e-10!11;UBERON:0009618!2.41e-10!11;UBERON:0007285!2.41e-10!11;UBERON:0003914!1.79e-08!47;UBERON:0004872!1.24e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.27e-44,3;UBERON:0004237,3.27e-44,3;UBERON:0004695,3.27e-44,3;UBERON:0002111,3.27e-44,3;UBERON:0004178,3.27e-44,3;UBERON:0000947,2.04e-33,4;UBERON:0001637,2.04e-33,4;UBERON:0004573,2.04e-33,4;UBERON:0003509,2.04e-33,4;UBERON:0004571,2.04e-33,4;UBERON:0010191,2.04e-33,4;UBERON:0004572,2.04e-33,4;UBERON:0000055,6.27e-27,5;UBERON:0007500,6.27e-27,5;UBERON:0001981,6.27e-27,5;UBERON:0002049,6.27e-27,5;UBERON:0007798,6.27e-27,5;UBERON:0004537,6.27e-27,5;UBERON:0006965,6.27e-27,5;UBERON:0001134,3.07e-26,9;UBERON:0002036,3.07e-26,9;UBERON:0002385,3.07e-26,9;UBERON:0000486,3.07e-26,9;UBERON:0007503,3.07e-26,9;UBERON:0001015,3.07e-26,9;UBERON:0002329,3.07e-26,9;UBERON:0003082,3.07e-26,9;UBERON:0003059,3.07e-26,9;UBERON:0007282,3.07e-26,9;UBERON:0004290,3.07e-26,9;UBERON:0009618,3.07e-26,9;UBERON:0000383,1.09e-23,10;UBERON:0007524,1.33e-21,11;UBERON:0003077,1.33e-21,11;UBERON:0007285,1.33e-21,11;UBERON:0004535,1.17e-10,23;UBERON:0001009,1.17e-10,23;UBERON:0002204,8.38e-08,32;UBERON:0004872,1.40e-07,33|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,4.76471576731718,5.13930906052708,0,0,0,0,0,0,0,0,0,1.28629718017973,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,7.11066703153331,0.216491041011214,0.760079596425296,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477937595905104,0,0,0,0,0,0,0.283880170416537,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Gpr39}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71111 | |||
|HGNC= | |||
|MCL_coexpression_id=1028 | |||
|TSSclassifier=NA | |||
|UniProt=Q5U431 | |||
|association_with_transcript=135bp_to_NM_027677,uc007ckh.2_5end | |||
|cluster_id=chr1:127573708..127573719,+ | |||
|description=CAGE_peak_9_at_Gpr39_5end | |||
|id=chr1:127573708..127573719,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.53e-19!6;CL:0000183!1.53e-19!6;CL:0000187!1.53e-19!6;CL:0000056!1.53e-19!6;CL:0000222!1.18e-16!7;CL:0000355!8.44e-13!9;CL:0000192!7.13e-11!3;CL:0000359!7.13e-11!3;CL:0002539!7.13e-11!3;CL:0000514!7.13e-11!3;CL:0002494!2.61e-10!3;CL:0000737!2.61e-10!3;CL:0000746!2.61e-10!3;CL:0000513!2.61e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.27e-44,3;CL:0000359,3.27e-44,3;CL:0002539,3.27e-44,3;CL:0000514,3.27e-44,3;CL:0000680,5.90e-39,6;CL:0000187,5.90e-39,6;CL:0000056,5.90e-39,6;CL:0000222,1.65e-33,7;CL:0000355,3.07e-26,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!3.37e-13!4;UBERON:0001637!3.37e-13!4;UBERON:0003509!3.37e-13!4;UBERON:0004573!3.37e-13!4;UBERON:0004571!3.37e-13!4;UBERON:0010191!3.37e-13!4;UBERON:0004572!3.37e-13!4;UBERON:0001134!8.44e-13!9;UBERON:0002036!8.44e-13!9;UBERON:0002385!8.44e-13!9;UBERON:0000486!8.44e-13!9;UBERON:0001015!8.44e-13!9;UBERON:0004290!8.44e-13!9;UBERON:0003082!8.44e-13!9;UBERON:0004535!9.46e-12!23;UBERON:0001009!9.46e-12!23;UBERON:0000383!1.89e-11!10;UBERON:0001135!7.13e-11!3;UBERON:0004237!7.13e-11!3;UBERON:0004695!7.13e-11!3;UBERON:0002111!7.13e-11!3;UBERON:0004178!7.13e-11!3;UBERON:0000055!1.45e-10!5;UBERON:0001981!1.45e-10!5;UBERON:0002049!1.45e-10!5;UBERON:0007500!1.45e-10!5;UBERON:0007798!1.45e-10!5;UBERON:0004537!1.45e-10!5;UBERON:0006965!1.45e-10!5;UBERON:0002329!2.41e-10!11;UBERON:0003077!2.41e-10!11;UBERON:0003059!2.41e-10!11;UBERON:0007282!2.41e-10!11;UBERON:0009618!2.41e-10!11;UBERON:0007285!2.41e-10!11;UBERON:0003914!1.79e-08!47;UBERON:0004872!1.24e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.27e-44,3;UBERON:0004237,3.27e-44,3;UBERON:0004695,3.27e-44,3;UBERON:0002111,3.27e-44,3;UBERON:0004178,3.27e-44,3;UBERON:0000947,2.04e-33,4;UBERON:0001637,2.04e-33,4;UBERON:0004573,2.04e-33,4;UBERON:0003509,2.04e-33,4;UBERON:0004571,2.04e-33,4;UBERON:0010191,2.04e-33,4;UBERON:0004572,2.04e-33,4;UBERON:0000055,6.27e-27,5;UBERON:0007500,6.27e-27,5;UBERON:0001981,6.27e-27,5;UBERON:0002049,6.27e-27,5;UBERON:0007798,6.27e-27,5;UBERON:0004537,6.27e-27,5;UBERON:0006965,6.27e-27,5;UBERON:0001134,3.07e-26,9;UBERON:0002036,3.07e-26,9;UBERON:0002385,3.07e-26,9;UBERON:0000486,3.07e-26,9;UBERON:0007503,3.07e-26,9;UBERON:0001015,3.07e-26,9;UBERON:0002329,3.07e-26,9;UBERON:0003082,3.07e-26,9;UBERON:0003059,3.07e-26,9;UBERON:0007282,3.07e-26,9;UBERON:0004290,3.07e-26,9;UBERON:0009618,3.07e-26,9;UBERON:0000383,1.09e-23,10;UBERON:0007524,1.33e-21,11;UBERON:0003077,1.33e-21,11;UBERON:0007285,1.33e-21,11;UBERON:0004535,1.17e-10,23;UBERON:0001009,1.17e-10,23;UBERON:0002204,8.38e-08,32;UBERON:0004872,1.40e-07,33 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,4.76471576731718,5.13930906052708,0,0,0,0,0,0,0,0,0,1.28629718017973,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0.259786004602869,0,0,0,0,7.11066703153331,0.216491041011214,0.760079596425296,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477937595905104,0,0,0,0,0,0,0.283880170416537,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Gpr39 | |||
}} |
Latest revision as of 07:05, 26 September 2015
Short description: | p9@Gpr39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Gpr39_5end |
Coexpression cluster: | MCL_coexpression_mm9:1028 |
Association with transcript: | 135bp_to_NM_027677, uc007ckh.2_5end |
EntrezGene: | Gpr39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.27e-44 | 3 |
vascular associated smooth muscle cell | 3.27e-44 | 3 |
aortic smooth muscle cell | 3.27e-44 | 3 |
smooth muscle myoblast | 3.27e-44 | 3 |
muscle precursor cell | 5.90e-39 | 6 |
muscle cell | 5.90e-39 | 6 |
myoblast | 5.90e-39 | 6 |
mesodermal cell | 1.65e-33 | 7 |
multi-potent skeletal muscle stem cell | 3.07e-26 | 9 |