FFCP PHASE1:Mm9::chr14:64225328..64225364,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:64225328..64225364,+
|short_description=p2@Xkr6
|description=CAGE_peak_2_at_Xkr6_5end
|association_with_transcript=0bp_to_ENSMUST00000119973_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=219149 | |EntrezGene=219149 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=367 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q6C8 | |UniProt=E9Q6C8 | ||
|association_with_transcript=0bp_to_ENSMUST00000119973_5end | |||
|cluster_id=chr14:64225328..64225364,+ | |||
|description=CAGE_peak_2_at_Xkr6_5end | |||
|id=chr14:64225328..64225364,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.82e-14!33;CL:0000047!3.82e-14!33;CL:0000031!3.82e-14!33;CL:0000404!3.82e-14!33;CL:0000117!3.60e-11!23;CL:0000337!3.60e-11!23;CL:0000393!1.11e-10!39;CL:0000211!1.11e-10!39;CL:0000221!7.24e-09!44;CL:0000133!7.24e-09!44;CL:0002319!1.94e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.13e-16,33;CL:0000047,2.13e-16,33;CL:0000031,2.13e-16,33;CL:0000404,2.13e-16,33;CL:0000117,6.87e-13,23;CL:0000337,6.87e-13,23;CL:0000393,1.26e-11,39;CL:0000211,1.26e-11,39;CL:0000221,8.60e-10,44;CL:0000133,8.60e-10,44;CL:0002319,2.69e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-24,64;UBERON:0003075,2.49e-24,64;UBERON:0007284,2.49e-24,64;UBERON:0001017,7.42e-24,73;UBERON:0004121,1.31e-22,95;UBERON:0000924,1.31e-22,95;UBERON:0006601,1.31e-22,95;UBERON:0001016,1.86e-22,75;UBERON:0010371,4.98e-21,73;UBERON:0000073,1.48e-19,54;UBERON:0001049,6.16e-19,52;UBERON:0005068,6.16e-19,52;UBERON:0006241,6.16e-19,52;UBERON:0007135,6.16e-19,52;UBERON:0010314,1.91e-18,92;UBERON:0003056,3.21e-17,49;UBERON:0000955,6.19e-15,47;UBERON:0006238,6.19e-15,47;UBERON:0002616,1.06e-14,46;UBERON:0002020,4.47e-14,34;UBERON:0003080,1.21e-13,40;UBERON:0002780,5.12e-13,39;UBERON:0001890,5.12e-13,39;UBERON:0006240,5.12e-13,39;UBERON:0003528,1.86e-10,29;UBERON:0002791,1.86e-10,29;UBERON:0001893,1.86e-10,29;UBERON:0002420,9.86e-07,8;UBERON:0007245,9.86e-07,8;UBERON:0010009,9.86e-07,8;UBERON:0010011,9.86e-07,8;UBERON:0000454,9.86e-07,8 | |||
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| ||
|short_description=p2@Xkr6 | |||
}} | }} |
Latest revision as of 06:11, 26 September 2015
Short description: | p2@Xkr6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Xkr6_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | 0bp_to_ENSMUST00000119973_5end |
EntrezGene: | Xkr6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.13e-16 | 33 |
neuronal stem cell | 2.13e-16 | 33 |
neuroblast | 2.13e-16 | 33 |
electrically signaling cell | 2.13e-16 | 33 |
CNS neuron (sensu Vertebrata) | 6.87e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.87e-13 | 23 |
electrically responsive cell | 1.26e-11 | 39 |
electrically active cell | 1.26e-11 | 39 |
ectodermal cell | 8.60e-10 | 44 |
neurectodermal cell | 8.60e-10 | 44 |
neural cell | 2.69e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.49e-24 | 64 |
neural plate | 2.49e-24 | 64 |
presumptive neural plate | 2.49e-24 | 64 |
central nervous system | 7.42e-24 | 73 |
ectoderm-derived structure | 1.31e-22 | 95 |
ectoderm | 1.31e-22 | 95 |
presumptive ectoderm | 1.31e-22 | 95 |
nervous system | 1.86e-22 | 75 |
ecto-epithelium | 4.98e-21 | 73 |
regional part of nervous system | 1.48e-19 | 54 |
neural tube | 6.16e-19 | 52 |
neural rod | 6.16e-19 | 52 |
future spinal cord | 6.16e-19 | 52 |
neural keel | 6.16e-19 | 52 |
structure with developmental contribution from neural crest | 1.91e-18 | 92 |
pre-chordal neural plate | 3.21e-17 | 49 |
brain | 6.19e-15 | 47 |
future brain | 6.19e-15 | 47 |
regional part of brain | 1.06e-14 | 46 |
gray matter | 4.47e-14 | 34 |
anterior neural tube | 1.21e-13 | 40 |
regional part of forebrain | 5.12e-13 | 39 |
forebrain | 5.12e-13 | 39 |
future forebrain | 5.12e-13 | 39 |
brain grey matter | 1.86e-10 | 29 |
regional part of telencephalon | 1.86e-10 | 29 |
telencephalon | 1.86e-10 | 29 |
basal ganglion | 9.86e-07 | 8 |
nuclear complex of neuraxis | 9.86e-07 | 8 |
aggregate regional part of brain | 9.86e-07 | 8 |
collection of basal ganglia | 9.86e-07 | 8 |
cerebral subcortex | 9.86e-07 | 8 |