FFCP PHASE1:Mm9::chr1:120355840..120355844,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68204 | |EntrezGene=68204 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=595 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000116892,NR_027901,uc007cih.2_5end | |association_with_transcript=0bp_to_ENSMUST00000116892,NR_027901,uc007cih.2_5end | ||
|cluster_id=chr1:120355840..120355844,- | |||
|description=CAGE_peak_1_at_2900060B14Rik_5end | |description=CAGE_peak_1_at_2900060B14Rik_5end | ||
|id=chr1:120355840..120355844,- | |id=chr1:120355840..120355844,- | ||
|ontology_enrichment_celltype=CL:0000034!4.17e-23!97;CL:0000144!2.24e-21!121;CL:0000012!2.24e-21!121;CL:0000548!5.93e-21!115;CL:0000004!5.93e-21!115;CL:0000255!5.93e-21!115;CL:0000723!9.60e-21!91;CL:0000048!9.60e-21!91;CL:0002371!4.22e-20!118;CL:0002321!3.00e-11!70;CL:0000220!3.00e-11!70;CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0000219!4.03e-11!54;CL:0000055!4.43e-11!50;CL:0002319!1.09e-10!43;CL:0000221!2.14e-10!44;CL:0000133!2.14e-10!44;CL:0002320!4.28e-10!46;CL:0000134!4.28e-10!46;CL:0000393!6.67e-10!39;CL:0000211!6.67e-10!39;CL:0000540!3.36e-09!33;CL:0000047!3.36e-09!33;CL:0000031!3.36e-09!33;CL:0000404!3.36e-09!33;CL:0000988!6.22e-08!32;CL:0002032!6.22e-08!32;CL:0000037!6.22e-08!32;CL:0000566!6.22e-08!32;CL:0000837!6.22e-08!32;CL:0000063!9.39e-08!66;CL:0002031!2.14e-07!25 | |ontology_enrichment_celltype=CL:0000034!4.17e-23!97;CL:0000144!2.24e-21!121;CL:0000012!2.24e-21!121;CL:0000548!5.93e-21!115;CL:0000004!5.93e-21!115;CL:0000255!5.93e-21!115;CL:0000723!9.60e-21!91;CL:0000048!9.60e-21!91;CL:0002371!4.22e-20!118;CL:0002321!3.00e-11!70;CL:0000220!3.00e-11!70;CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0000219!4.03e-11!54;CL:0000055!4.43e-11!50;CL:0002319!1.09e-10!43;CL:0000221!2.14e-10!44;CL:0000133!2.14e-10!44;CL:0002320!4.28e-10!46;CL:0000134!4.28e-10!46;CL:0000393!6.67e-10!39;CL:0000211!6.67e-10!39;CL:0000540!3.36e-09!33;CL:0000047!3.36e-09!33;CL:0000031!3.36e-09!33;CL:0000404!3.36e-09!33;CL:0000988!6.22e-08!32;CL:0002032!6.22e-08!32;CL:0000037!6.22e-08!32;CL:0000566!6.22e-08!32;CL:0000837!6.22e-08!32;CL:0000063!9.39e-08!66;CL:0002031!2.14e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.17e-23,97;CL:0000723,9.60e-21,91;CL:0000048,9.60e-21,91;CL:0002321,2.93e-11,70;CL:0000117,3.55e-11,23;CL:0000337,3.55e-11,23;CL:0000219,4.03e-11,54;CL:0002319,1.09e-10,43;CL:0000221,2.14e-10,44;CL:0000133,2.14e-10,44;CL:0002320,4.28e-10,46;CL:0000134,4.28e-10,46;CL:0000393,6.67e-10,39;CL:0000211,6.67e-10,39;CL:0000540,3.36e-09,33;CL:0000047,3.36e-09,33;CL:0000031,3.36e-09,33;CL:0000404,3.36e-09,33;CL:0000988,6.22e-08,32;CL:0002032,6.22e-08,32;CL:0000037,6.22e-08,32;CL:0000837,6.22e-08,32;CL:0002031,2.14e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.39e-11!73;UBERON:0005743!4.39e-11!73;UBERON:0000073!1.24e-10!75;UBERON:0001016!1.24e-10!75;UBERON:0002384!4.28e-10!46;UBERON:0007811!1.06e-09!86;UBERON:0002020!1.58e-09!34;UBERON:0000153!1.99e-09!94;UBERON:0002390!1.10e-08!45;UBERON:0003061!1.10e-08!45;UBERON:0000955!9.07e-08!50;UBERON:0006238!9.07e-08!50;UBERON:0001049!1.01e-07!52;UBERON:0005068!1.01e-07!52;UBERON:0006241!1.01e-07!52;UBERON:0007135!1.01e-07!52;UBERON:0002616!1.06e-07!49;UBERON:0002791!1.37e-07!29;UBERON:0003528!1.37e-07!29;UBERON:0001893!1.37e-07!29;UBERON:0002780!3.90e-07!39;UBERON:0001890!3.90e-07!39;UBERON:0006240!3.90e-07!39;UBERON:0002193!4.42e-07!48;UBERON:0003080!5.01e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.39e-11,73;UBERON:0001016,1.24e-10,75;UBERON:0002384,4.28e-10,46;UBERON:0002020,1.58e-09,34;UBERON:0000073,1.70e-09,54;UBERON:0002390,1.08e-08,45;UBERON:0003061,1.08e-08,45;UBERON:0001049,1.01e-07,52;UBERON:0005068,1.01e-07,52;UBERON:0006241,1.01e-07,52;UBERON:0007135,1.01e-07,52;UBERON:0003528,1.37e-07,29;UBERON:0002791,1.37e-07,29;UBERON:0001893,1.37e-07,29;UBERON:0002780,3.90e-07,39;UBERON:0001890,3.90e-07,39;UBERON:0006240,3.90e-07,39;UBERON:0002193,4.32e-07,48;UBERON:0002405,4.32e-07,48;UBERON:0003080,5.01e-07,40 | |||
|phase1_expression=5.60520964866779,4.88565570695105,19.5649672937501,9.98131897312539,17.0304548181758,8.89760141133016,10.7461814673942,23.3713215429253,56.3154888606667,51.4941957908386,46.0576334526608,44.5926368783931,22.427295620988,16.2601948499335,23.3176833270964,11.7435655086099,29.3815988813822,14.3535285237998,15.0825876966313,12.7316895539409,7.05859308253879,3.3758923408301,1.82839852397255,5.75972722056264,5.50582274561208,8.03924749761028,6.46142994238612,6.67960821326256,3.23039813075836,5.04060259519861,6.87364583031445,439.441226034065,292.770838890255,269.418857726246,33.5067878911479,20.613096024453,32.4629276457167,8.78916424547506,9.37602413428561,6.28228492768558,25.8821854733646,18.442228093878,7.76816564849846,12.211991343631,13.0776241273174,18.5382219683298,17.2126095756569,43.6050312760893,10.9843091367236,21.970578595394,31.3569584440812,31.6255641602937,26.8452169692378,51.5007120828054,51.7584450679395,13.6347501099052,19.7708073557742,28.3619650752593,20.4339625468194,41.2612963832186,44.3681982454325,16.6033820713875,19.5644855144451,25.1971920838792,41.5323872278129,26.2877642530057,17.9760066311043,33.0427742576537,21.1526809109294,58.8625891126171,20.6118462124354,29.7077023779956,27.8294361599033,27.5604298233647,29.2328686605621,73.5375029288017,34.1359231098105,36.1355166781081,35.943928781961,23.7395317914349,33.1185269840723,40.1103295328705,32.6644108831616,30.9519435517424,42.0195181386228,30.9360014747351,44.277592728521,23.6727296198132,6.36100023998746,10.7311615351635,26.6675329605544,7.74381489283248,12.9194553404473,41.0174425644741,16.2444104361917,10.7526452903361,7.44355426698285,11.2484012901518,22.8611684050525,18.0203183000274,8.87313544593087,0,0,0,32.2571651106709,33.443502242713,36.9032844860792,8.10705546005326,4.14300613835475,7.12522267511159,11.450031566565,13.0920155674221,10.8389283710347,6.17962826265753,5.52666923537813,2.89033160058254,3.70792451601561,4.19338135067744,10.6153266233985,3.558870698843,5.96272099843063,6.30337829075789,13.0474232852686,11.1256702864388,8.16842156572475,7.40825460104915,26.1196971422906,16.7972764678154,33.9277506285083,10.6351353977424,10.5225138648284,4.02093926761166,9.38651329038293,5.11430914660661,6.02585329222724,9.08551073179443,5.80484373946803,5.97153458928446,5.81262344397452,4.41927897361595,18.6072233436666,6.66716102857071,12.4242869565691,11.7549757911858,7.14383241088942,8.32739181851524,12.087522468205,8.53721123438752,10.7783996466421,12.8592134514117,21.8179393963297,17.3164628617784,15.8486932058591,10.0993128291428,7.40815691068596,17.3159812132089,6.31991868581911,9.52187256324446,23.017243451043,10.5634143993106,17.8239805585633,12.244220179349,8.99629995223799,10.6252685143598,10.6444307892291,10.4640275137684,7.51165523918934,6.30532848782715,5.9241545968853,8.70087559619205,5.43161023957233,7.45619935869195,10.5384055339704,5.36825675041487,7.14985825118033,5.65975368086064,2.31293148088659,9.25576983322405,21.9686898051291,17.6499870613933,6.70110798874885,9.68080918192044,11.1189021922435,8.56015317506516,21.353807769503,2.63518327558417,5.02670417600539,4.37704238490532,4.48417400373976,44.9409704327111,7.99710784536369,4.77939055810481,10.2420666514664,18.5082590427761,11.270773567308,18.124968178233,18.2315337937568,6.94344616914154,8.66340558602325,7.82333784291891,6.90794402502049,3.82531208157582,6.81841042300442,13.5144535630036,10.4176267409998,15.9652099793246,11.3601667977562,8.92355491083942,7.63877555344259,10.0693648107784,3.40483976227574,3.56929837144506,10.0637744569148,2.23284568601102,2.80833905803104,4.54641980304801,3.04975602987251,0.482443521363367,8.12914036733061,5.87423376488503,6.19266910479698,13.2401166904647,14.5507953938871,7.87279409976534,10.7119638398706,2.14647012643579,8.35466263762812,10.4088404134924,5.74037167166954,8.84861899464985,8.63424909329478,4.19482269886384,48.2532108605671,31.5465296614852,3.93411418415229,4.69092468718045,6.74312477948726,5.97779601620236,5.24591825205361,2.52470927204373,10.7272794601527,17.1793047490521,16.1567548299599,9.79772071605463,14.2591151412732,9.05844898524264,12.5491317519217,14.9050487534769,11.8586333383957,13.8168166061377,12.6326675835359,13.3549202750441,7.00413925220377,8.41347627159931,2.65490276679926,18.6941089839336,16.9301191900261,10.1846743068185,3.2483208216885,6.7635732547664,0.258428293168221,2.18120237686503,1.06949213515416,5.05658812697306,2.10837217149998,0,24.5116516142727,18.546292685225,13.0652270620582,14.5749183821483,9.04435191575595,7.84822797449111,18.2649412868354,17.9634319977614,11.2642419870581,15.4637411730589,1.54369878638473,4.9465875882444,3.06782410722221,8.2025577902292,5.61050016814741,4.76008609260678,12.2421951384537,5.19190845629427,17.5997007221788,7.63631411463923,10.0005044779644,22.9809517545723,20.7775226135958,13.4979122191848,24.646872349109,29.2498535356445,24.461395363383,0,17.2403116501719,8.13277868507395,11.9885928312199,11.9180328728247,11.35485331480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| ||
|short_description=p1@2900060B14Rik | |short_description=p1@2900060B14Rik | ||
}} | }} |
Latest revision as of 06:08, 26 September 2015
Short description: | p1@2900060B14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2900060B14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:595 |
Association with transcript: | 0bp_to_ENSMUST00000116892, NR_027901, uc007cih.2_5end |
EntrezGene: | 2900060B14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.17e-23 | 97 |
somatic stem cell | 9.60e-21 | 91 |
multi fate stem cell | 9.60e-21 | 91 |
embryonic cell | 2.93e-11 | 70 |
CNS neuron (sensu Vertebrata) | 3.55e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.55e-11 | 23 |
motile cell | 4.03e-11 | 54 |
neural cell | 1.09e-10 | 43 |
ectodermal cell | 2.14e-10 | 44 |
neurectodermal cell | 2.14e-10 | 44 |
connective tissue cell | 4.28e-10 | 46 |
mesenchymal cell | 4.28e-10 | 46 |
electrically responsive cell | 6.67e-10 | 39 |
electrically active cell | 6.67e-10 | 39 |
neuron | 3.36e-09 | 33 |
neuronal stem cell | 3.36e-09 | 33 |
neuroblast | 3.36e-09 | 33 |
electrically signaling cell | 3.36e-09 | 33 |
hematopoietic cell | 6.22e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.22e-08 | 32 |
hematopoietic stem cell | 6.22e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.22e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.39e-11 | 73 |
nervous system | 1.24e-10 | 75 |
connective tissue | 4.28e-10 | 46 |
gray matter | 1.58e-09 | 34 |
regional part of nervous system | 1.70e-09 | 54 |
hematopoietic system | 1.08e-08 | 45 |
blood island | 1.08e-08 | 45 |
neural tube | 1.01e-07 | 52 |
neural rod | 1.01e-07 | 52 |
future spinal cord | 1.01e-07 | 52 |
neural keel | 1.01e-07 | 52 |
brain grey matter | 1.37e-07 | 29 |
regional part of telencephalon | 1.37e-07 | 29 |
telencephalon | 1.37e-07 | 29 |
regional part of forebrain | 3.90e-07 | 39 |
forebrain | 3.90e-07 | 39 |
future forebrain | 3.90e-07 | 39 |
hemolymphoid system | 4.32e-07 | 48 |
immune system | 4.32e-07 | 48 |
anterior neural tube | 5.01e-07 | 40 |