FFCP PHASE1:Mm9::chr1:120355840..120355844,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:120355840..120355844,- to FFCP PHASE1:Mm9::chr1:120355840..120355844,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68204 | |EntrezGene=68204 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=595 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000116892,NR_027901,uc007cih.2_5end | |||
|cluster_id=chr1:120355840..120355844,- | |||
|description=CAGE_peak_1_at_2900060B14Rik_5end | |||
|id=chr1:120355840..120355844,- | |||
|ontology_enrichment_celltype=CL:0000034!4.17e-23!97;CL:0000144!2.24e-21!121;CL:0000012!2.24e-21!121;CL:0000548!5.93e-21!115;CL:0000004!5.93e-21!115;CL:0000255!5.93e-21!115;CL:0000723!9.60e-21!91;CL:0000048!9.60e-21!91;CL:0002371!4.22e-20!118;CL:0002321!3.00e-11!70;CL:0000220!3.00e-11!70;CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0000219!4.03e-11!54;CL:0000055!4.43e-11!50;CL:0002319!1.09e-10!43;CL:0000221!2.14e-10!44;CL:0000133!2.14e-10!44;CL:0002320!4.28e-10!46;CL:0000134!4.28e-10!46;CL:0000393!6.67e-10!39;CL:0000211!6.67e-10!39;CL:0000540!3.36e-09!33;CL:0000047!3.36e-09!33;CL:0000031!3.36e-09!33;CL:0000404!3.36e-09!33;CL:0000988!6.22e-08!32;CL:0002032!6.22e-08!32;CL:0000037!6.22e-08!32;CL:0000566!6.22e-08!32;CL:0000837!6.22e-08!32;CL:0000063!9.39e-08!66;CL:0002031!2.14e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.17e-23,97;CL:0000723,9.60e-21,91;CL:0000048,9.60e-21,91;CL:0002321,2.93e-11,70;CL:0000117,3.55e-11,23;CL:0000337,3.55e-11,23;CL:0000219,4.03e-11,54;CL:0002319,1.09e-10,43;CL:0000221,2.14e-10,44;CL:0000133,2.14e-10,44;CL:0002320,4.28e-10,46;CL:0000134,4.28e-10,46;CL:0000393,6.67e-10,39;CL:0000211,6.67e-10,39;CL:0000540,3.36e-09,33;CL:0000047,3.36e-09,33;CL:0000031,3.36e-09,33;CL:0000404,3.36e-09,33;CL:0000988,6.22e-08,32;CL:0002032,6.22e-08,32;CL:0000037,6.22e-08,32;CL:0000837,6.22e-08,32;CL:0002031,2.14e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.39e-11!73;UBERON:0005743!4.39e-11!73;UBERON:0000073!1.24e-10!75;UBERON:0001016!1.24e-10!75;UBERON:0002384!4.28e-10!46;UBERON:0007811!1.06e-09!86;UBERON:0002020!1.58e-09!34;UBERON:0000153!1.99e-09!94;UBERON:0002390!1.10e-08!45;UBERON:0003061!1.10e-08!45;UBERON:0000955!9.07e-08!50;UBERON:0006238!9.07e-08!50;UBERON:0001049!1.01e-07!52;UBERON:0005068!1.01e-07!52;UBERON:0006241!1.01e-07!52;UBERON:0007135!1.01e-07!52;UBERON:0002616!1.06e-07!49;UBERON:0002791!1.37e-07!29;UBERON:0003528!1.37e-07!29;UBERON:0001893!1.37e-07!29;UBERON:0002780!3.90e-07!39;UBERON:0001890!3.90e-07!39;UBERON:0006240!3.90e-07!39;UBERON:0002193!4.42e-07!48;UBERON:0003080!5.01e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.39e-11,73;UBERON:0001016,1.24e-10,75;UBERON:0002384,4.28e-10,46;UBERON:0002020,1.58e-09,34;UBERON:0000073,1.70e-09,54;UBERON:0002390,1.08e-08,45;UBERON:0003061,1.08e-08,45;UBERON:0001049,1.01e-07,52;UBERON:0005068,1.01e-07,52;UBERON:0006241,1.01e-07,52;UBERON:0007135,1.01e-07,52;UBERON:0003528,1.37e-07,29;UBERON:0002791,1.37e-07,29;UBERON:0001893,1.37e-07,29;UBERON:0002780,3.90e-07,39;UBERON:0001890,3.90e-07,39;UBERON:0006240,3.90e-07,39;UBERON:0002193,4.32e-07,48;UBERON:0002405,4.32e-07,48;UBERON:0003080,5.01e-07,40 | |||
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| ||
|short_description=p1@2900060B14Rik | |||
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Latest revision as of 06:08, 26 September 2015
Short description: | p1@2900060B14Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2900060B14Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:595 |
Association with transcript: | 0bp_to_ENSMUST00000116892, NR_027901, uc007cih.2_5end |
EntrezGene: | 2900060B14Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.17e-23 | 97 |
somatic stem cell | 9.60e-21 | 91 |
multi fate stem cell | 9.60e-21 | 91 |
embryonic cell | 2.93e-11 | 70 |
CNS neuron (sensu Vertebrata) | 3.55e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.55e-11 | 23 |
motile cell | 4.03e-11 | 54 |
neural cell | 1.09e-10 | 43 |
ectodermal cell | 2.14e-10 | 44 |
neurectodermal cell | 2.14e-10 | 44 |
connective tissue cell | 4.28e-10 | 46 |
mesenchymal cell | 4.28e-10 | 46 |
electrically responsive cell | 6.67e-10 | 39 |
electrically active cell | 6.67e-10 | 39 |
neuron | 3.36e-09 | 33 |
neuronal stem cell | 3.36e-09 | 33 |
neuroblast | 3.36e-09 | 33 |
electrically signaling cell | 3.36e-09 | 33 |
hematopoietic cell | 6.22e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.22e-08 | 32 |
hematopoietic stem cell | 6.22e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.22e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.39e-11 | 73 |
nervous system | 1.24e-10 | 75 |
connective tissue | 4.28e-10 | 46 |
gray matter | 1.58e-09 | 34 |
regional part of nervous system | 1.70e-09 | 54 |
hematopoietic system | 1.08e-08 | 45 |
blood island | 1.08e-08 | 45 |
neural tube | 1.01e-07 | 52 |
neural rod | 1.01e-07 | 52 |
future spinal cord | 1.01e-07 | 52 |
neural keel | 1.01e-07 | 52 |
brain grey matter | 1.37e-07 | 29 |
regional part of telencephalon | 1.37e-07 | 29 |
telencephalon | 1.37e-07 | 29 |
regional part of forebrain | 3.90e-07 | 39 |
forebrain | 3.90e-07 | 39 |
future forebrain | 3.90e-07 | 39 |
hemolymphoid system | 4.32e-07 | 48 |
immune system | 4.32e-07 | 48 |
anterior neural tube | 5.01e-07 | 40 |