FFCP PHASE1:Mm9::chr7:150155143..150155156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17173 | |EntrezGene=17173 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35885,D3Z7Q6,Q3TJR9 | |UniProt=O35885,D3Z7Q6,Q3TJR9 | ||
|association_with_transcript=12bp_to_ENSMUST00000009392,ENSMUST00000121862,NM_008554,uc009koj.2_5end | |association_with_transcript=12bp_to_ENSMUST00000009392,ENSMUST00000121862,NM_008554,uc009koj.2_5end | ||
|cluster_id=chr7:150155143..150155156,- | |||
|description=CAGE_peak_1_at_Ascl2_5end | |description=CAGE_peak_1_at_Ascl2_5end | ||
|id=chr7:150155143..150155156,- | |id=chr7:150155143..150155156,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.24e-09,3;CL:0000349,7.26e-08,3;CL:0000351,7.26e-08,3;CL:0000682,7.67e-08,3;CL:0002563,1.72e-07,9;CL:0002251,1.72e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.54e-12!43;UBERON:0005409!2.66e-10!59;UBERON:0003133!4.69e-07!24 | |ontology_enrichment_uberon=UBERON:0000160!1.54e-12!43;UBERON:0005409!2.66e-10!59;UBERON:0003133!4.69e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.46e-30,31;UBERON:0005409,3.59e-20,47;UBERON:0000344,1.17e-15,15;UBERON:0004923,2.46e-13,24;UBERON:0001242,1.12e-11,13;UBERON:0001262,1.12e-11,13;UBERON:0004786,1.12e-11,13;UBERON:0002108,6.76e-10,4;UBERON:0004119,3.29e-09,118;UBERON:0000925,3.29e-09,118;UBERON:0006595,3.29e-09,118;UBERON:0000358,7.26e-08,3;UBERON:0000307,7.26e-08,3;UBERON:0007010,7.26e-08,3;UBERON:0000331,1.18e-07,3;UBERON:0002116,1.18e-07,3;UBERON:0001204,1.18e-07,3;UBERON:0001168,1.18e-07,3;UBERON:0001007,1.63e-07,116;UBERON:0001555,1.63e-07,116;UBERON:0007026,1.63e-07,116;UBERON:0003350,1.72e-07,9;UBERON:0004808,1.72e-07,9;UBERON:0001277,1.72e-07,9 | |||
|phase1_expression=0,0,0,0,0,6.88305014838748,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,4.35877634027623,1.72269589234506,2.15380998079537,4.95583835177545,1.90023419456374,1.26015064879965,8.20402889424627,0,0,0,10.9763615505484,22.275442478038,17.9669033510885,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0.461230994512117,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,1.32225283331772,0,0.696710015581316,1.9330119198314,2.01683524623343,0.667134131534611,1.52180500890047,2.37264530772256,2.14108641141214,2.26201687920243,2.78539060857611,2.53453313254856,2.69645822596266,0.864552199498777,0.995706366271836,0,0,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0,0,0,0.500535317148282,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.469380496577004,0.502518772325447,0.476087281772027,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,2.18502572539483,1.81394134178851,0.188605079755898,0.590603785761546,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0.891844088010353,0.164549020602121,0,26.2832313031356,3.60114520468494,0,0,0.161464426695906,0.0603129249281559,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0.165306911450672,0,1.42576470620972,0.621339313086926,1.69107881605257,0.448549638131936,1.98550188548517,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,1.78260885523708,0.483168241652012,0,0,0.608175645870493,1.02710957164827,0.649604114888975,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,1.99787358036658,1.79427713218951,6.88326927092722,0,0.93841237725591,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.735374033800057,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0,0,0.145346416632329,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,6.88305014838748,7.70921713965235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.99981056983517,4.35877634027623,1.72269589234506,2.15380998079537,4.95583835177545,1.90023419456374,1.26015064879965,8.20402889424627,0,0,0,10.9763615505484,22.275442478038,17.9669033510885,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0.461230994512117,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,1.32225283331772,0,0.696710015581316,1.9330119198314,2.01683524623343,0.667134131534611,1.52180500890047,2.37264530772256,2.14108641141214,2.26201687920243,2.78539060857611,2.53453313254856,2.69645822596266,0.864552199498777,0.995706366271836,0,0,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0,0,0,0.500535317148282,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.469380496577004,0.502518772325447,0.476087281772027,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,2.18502572539483,1.81394134178851,0.188605079755898,0.590603785761546,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0.891844088010353,0.164549020602121,0,26.2832313031356,3.60114520468494,0,0,0.161464426695906,0.0603129249281559,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0.165306911450672,0,1.42576470620972,0.621339313086926,1.69107881605257,0.448549638131936,1.98550188548517,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,1.78260885523708,0.483168241652012,0,0,0.608175645870493,1.02710957164827,0.649604114888975,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.228620419965,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,1.99787358036658,1.79427713218951,6.88326927092722,0,0.93841237725591,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.735374033800057,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0,0,0.145346416632329,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@Ascl2 | |short_description=p1@Ascl2 | ||
}} | }} |
Latest revision as of 05:52, 26 September 2015
Short description: | p1@Ascl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ascl2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENSMUST00000009392, ENSMUST00000121862, NM_008554, uc009koj.2_5end |
EntrezGene: | Ascl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.24e-09 | 3 |
extraembryonic cell | 7.26e-08 | 3 |
trophoblast cell | 7.26e-08 | 3 |
M cell of gut | 7.67e-08 | 3 |
intestinal epithelial cell | 1.72e-07 | 9 |
epithelial cell of alimentary canal | 1.72e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.46e-30 | 31 |
gastrointestinal system | 3.59e-20 | 47 |
mucosa | 1.17e-15 | 15 |
organ component layer | 2.46e-13 | 24 |
intestinal mucosa | 1.12e-11 | 13 |
wall of intestine | 1.12e-11 | 13 |
gastrointestinal system mucosa | 1.12e-11 | 13 |
small intestine | 6.76e-10 | 4 |
endoderm-derived structure | 3.29e-09 | 118 |
endoderm | 3.29e-09 | 118 |
presumptive endoderm | 3.29e-09 | 118 |
blastocyst | 7.26e-08 | 3 |
blastula | 7.26e-08 | 3 |
cleaving embryo | 7.26e-08 | 3 |
ileal mucosa | 1.18e-07 | 3 |
ileum | 1.18e-07 | 3 |
mucosa of small intestine | 1.18e-07 | 3 |
wall of small intestine | 1.18e-07 | 3 |
digestive system | 1.63e-07 | 116 |
digestive tract | 1.63e-07 | 116 |
primitive gut | 1.63e-07 | 116 |
epithelium of mucosa | 1.72e-07 | 9 |
gastrointestinal system epithelium | 1.72e-07 | 9 |
intestinal epithelium | 1.72e-07 | 9 |