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FFCP PHASE1:Mm9::chr2:170557469..170557488,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:170557469..170557488,+
|DHSsupport=NA
|short_description=p2@Dok5
|DPIdataset=NA
|description=CAGE_peak_2_at_Dok5_5end
|association_with_transcript=162bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end
|EntrezGene=76829
|EntrezGene=76829
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q91ZM9,B1AVY6,Q6NXY7
|UniProt=Q91ZM9,B1AVY6,Q6NXY7
|association_with_transcript=162bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end
|cluster_id=chr2:170557469..170557488,+
|description=CAGE_peak_2_at_Dok5_5end
|id=chr2:170557469..170557488,+
|ontology_enrichment_celltype=CL:0000221!9.19e-13!44;CL:0000133!9.19e-13!44;CL:0002319!1.51e-12!43;CL:0000117!2.40e-12!23;CL:0000337!2.40e-12!23;CL:0000540!4.69e-11!33;CL:0000047!4.69e-11!33;CL:0000031!4.69e-11!33;CL:0000404!4.69e-11!33;CL:0000055!6.01e-09!50;CL:0000393!7.48e-08!39;CL:0000211!7.48e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-16,23;CL:0000337,4.68e-16,23;CL:0000221,2.32e-13,44;CL:0000133,2.32e-13,44;CL:0002319,4.49e-13,43;CL:0000540,3.54e-12,33;CL:0000047,3.54e-12,33;CL:0000031,3.54e-12,33;CL:0000404,3.54e-12,33;CL:0000393,1.35e-09,39;CL:0000211,1.35e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.53e-27!75;UBERON:0001016!2.53e-27!75;UBERON:0001017!4.31e-26!73;UBERON:0005743!4.31e-26!73;UBERON:0004121!1.36e-25!102;UBERON:0000924!1.36e-25!102;UBERON:0006601!1.36e-25!102;UBERON:0001049!2.93e-22!52;UBERON:0005068!2.93e-22!52;UBERON:0006241!2.93e-22!52;UBERON:0007135!2.93e-22!52;UBERON:0002346!3.52e-22!71;UBERON:0003075!3.52e-22!71;UBERON:0007284!3.52e-22!71;UBERON:0000033!2.76e-21!63;UBERON:0002616!3.09e-20!49;UBERON:0000955!3.62e-20!50;UBERON:0006238!3.62e-20!50;UBERON:0002020!2.81e-19!34;UBERON:0003056!9.25e-19!49;UBERON:0003080!2.73e-17!40;UBERON:0002791!1.12e-16!29;UBERON:0003528!1.12e-16!29;UBERON:0001893!1.12e-16!29;UBERON:0002780!1.30e-16!39;UBERON:0001890!1.30e-16!39;UBERON:0006240!1.30e-16!39;UBERON:0000956!4.85e-13!21;UBERON:0001869!4.85e-13!21;UBERON:0000203!4.85e-13!21;UBERON:0000153!3.23e-12!94;UBERON:0007811!3.16e-11!86;UBERON:0002619!2.54e-10!17;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.36e-29,75;UBERON:0001017,2.22e-27,73;UBERON:0000073,8.58e-27,54;UBERON:0001049,8.40e-26,52;UBERON:0005068,8.40e-26,52;UBERON:0006241,8.40e-26,52;UBERON:0007135,8.40e-26,52;UBERON:0002346,8.44e-26,64;UBERON:0003075,8.44e-26,64;UBERON:0007284,8.44e-26,64;UBERON:0004121,5.86e-25,95;UBERON:0000924,5.86e-25,95;UBERON:0006601,5.86e-25,95;UBERON:0002020,5.62e-24,34;UBERON:0010371,7.30e-23,73;UBERON:0002616,2.38e-21,46;UBERON:0000955,1.44e-20,47;UBERON:0006238,1.44e-20,47;UBERON:0003528,1.74e-20,29;UBERON:0002791,1.74e-20,29;UBERON:0001893,1.74e-20,29;UBERON:0003080,7.23e-19,40;UBERON:0003056,8.67e-19,49;UBERON:0002780,5.31e-18,39;UBERON:0001890,5.31e-18,39;UBERON:0006240,5.31e-18,39;UBERON:0010314,5.72e-16,92;UBERON:0000956,1.40e-15,21;UBERON:0001869,1.40e-15,21;UBERON:0000203,1.40e-15,21;UBERON:0002619,5.58e-12,17;UBERON:0002021,5.51e-11,10;UBERON:0000411,5.51e-11,10;UBERON:0001950,5.51e-11,10;UBERON:0003076,1.77e-07,12;UBERON:0003057,1.77e-07,12
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,0.219686182734472,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,1.28629718017973,0,0,2.42779753031517,5.28990979272033,5.07065122804943,1.35537812827653,0,0,0.988866362566974,0.7104801149461,3.59520132622086,3.07374644257244,7.98410014775278,8.37036817656482,7.36137364729837,3.71346279724945,1.54607978666129,4.40966877173835,1.91690942036473,6.43453150627015,3.30347642998166,1.65993539510744,3.07213066512487,2.76961204233407,3.38504281328916,1.56274011167028,4.18774498502071,1.68828783009504,1.98637722109853,3.53554302568401,4.41352210477219,7.08317894136142,3.86203585999239,3.09843396437821,0,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.148442139064825,1.21439728736295,1.21786191324856,0.691846491768175,0,0.352766121407114,0.125666591329675,0,0,0,2.10296904931632,1.32504911076236,0.484875253135222,1.86391761218122,1.46390398505774,2.93225389538837,0,0,0,0,7.9389038884556,5.94750783664214,6.40837195775608,10.4294592115366,8.69432554923124,3.94797284663164,3.89379031362618,0.101839363850316,1.24406970610093,0.758168275301024,1.26265113531884,0.390361328888111,0.919608417733892,1.80062129805349,1.65775299619287,0.95251098811859,1.2811372028485,1.03071897015702,3.88055056108524,0,0.945530400839096,1.23165786914764,1.31517439456545,1.94633074457919,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.583826711835847,0,0.656669856316381,0.162137619091711,0.438599962275997,0.219550115291051,0.402619256281115,5.04695876553905,4.11618449517138,0,0.264450566663544,0.213288250535234,1.39342003116263,0.38660238396628,0.80673409849337,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.667380422864376,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0,1.32643988239339,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,8.83028244932856,5.62616095642575,0,1.51482556322624,1.57754109708128,0,1.50796378412959,0.716906393857656,1.33679204449436,0,0.404810701674894,0.876767573733936,0.790575555893047,0.642642632843614,0,0.534196811001766,0.488660878060728,0,0,0,0,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,1.26042765821917,0.388076051348264,1.28602221018955,1.59606210278046,0.891844088010353,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.72375509913787,0.358117032009409,1.14898629821543,0,6.48988557036784,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0,0,0,0.149516546043979,0.330916980914195,0.777804753376191,0.129159823477731,0.675824501963113,1.40828686374905,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0,0,20.8958181768315,15.1907328047368,21.1971339972577,20.7942350635862,15.7568979547248,8.3093328712867,8.77529250301348,6.30449684513909,11.3285602246051,12.9440077937955,1.03787347584177,0.399024873401031,2.21953687480374,1.94485373654635,2.93458427679175,1.47074806760011,3.55594764482584,2.47242068686673,2.56735367673452,1.01078884705519,2.5347929989024,2.07488975524684,1.40462261204824,1.72867911493147,2.52716063404698,1.90517476513229,1.97003354106254,1.92909220463705,2.06042950401653,1.61918812147837,3.77156177623957,1.59728225543404,2.62279808942053,2.0348498328526,2.82328141245992,1.94613598150856,1.09756783723664,1.57841826862706,2.30866993537965,2.24456908663095,1.66089025373844,2.1670986122624,1.63692417267876,2.78886314134739,0.964533054905707,2.99772693525535,1.16965804222704,1.50409737833809,1.53030665655075,1.76473135295612,1.85494268496337
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,0.219686182734472,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,1.28629718017973,0,0,2.42779753031517,5.28990979272033,5.07065122804943,1.35537812827653,0,0,0.988866362566974,0.7104801149461,3.59520132622086,3.07374644257244,7.98410014775278,8.37036817656482,7.36137364729837,3.71346279724945,1.54607978666129,4.40966877173835,1.91690942036473,6.43453150627015,3.30347642998166,1.65993539510744,3.07213066512487,2.76961204233407,3.38504281328916,1.56274011167028,4.18774498502071,1.68828783009504,1.98637722109853,3.53554302568401,4.41352210477219,7.08317894136142,3.86203585999239,3.09843396437821,0,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.148442139064825,1.21439728736295,1.21786191324856,0.691846491768175,0,0.352766121407114,0.125666591329675,0,0,0,2.10296904931632,1.32504911076236,0.484875253135222,1.86391761218122,1.46390398505774,2.93225389538837,0,0,0,0,7.9389038884556,5.94750783664214,6.40837195775608,10.4294592115366,8.69432554923124,3.94797284663164,3.89379031362618,0.101839363850316,1.24406970610093,0.758168275301024,1.26265113531884,0.390361328888111,0.919608417733892,1.80062129805349,1.65775299619287,0.95251098811859,1.2811372028485,1.03071897015702,3.88055056108524,0,0.945530400839096,1.23165786914764,1.31517439456545,1.94633074457919,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,1.18372367792605,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.583826711835847,0,0.656669856316381,0.162137619091711,0.438599962275997,0.219550115291051,0.402619256281115,5.04695876553905,4.11618449517138,0,0.264450566663544,0.213288250535234,1.39342003116263,0.38660238396628,0.80673409849337,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.667380422864376,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0,0,0,1.32643988239339,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,8.83028244932856,5.62616095642575,0,1.51482556322624,1.57754109708128,0,1.50796378412959,0.716906393857656,1.33679204449436,0,0.404810701674894,0.876767573733936,0.790575555893047,0.642642632843614,0,0.534196811001766,0.488660878060728,0,0,0,0,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,1.26042765821917,0.388076051348264,1.28602221018955,1.59606210278046,0.891844088010353,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.72375509913787,0.358117032009409,1.14898629821543,0,6.48988557036784,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0,0,0,0.149516546043979,0.330916980914195,0.777804753376191,0.129159823477731,0.675824501963113,1.40828686374905,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.25984164595559,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0,0,20.8958181768315,15.1907328047368,21.1971339972577,20.7942350635862,15.7568979547248,8.3093328712867,8.77529250301348,6.30449684513909,11.3285602246051,12.9440077937955,1.03787347584177,0.399024873401031,2.21953687480374,1.94485373654635,2.93458427679175,1.47074806760011,3.55594764482584,2.47242068686673,2.56735367673452,1.01078884705519,2.5347929989024,2.07488975524684,1.40462261204824,1.72867911493147,2.52716063404698,1.90517476513229,1.97003354106254,1.92909220463705,2.06042950401653,1.61918812147837,3.77156177623957,1.59728225543404,2.62279808942053,2.0348498328526,2.82328141245992,1.94613598150856,1.09756783723664,1.57841826862706,2.30866993537965,2.24456908663095,1.66089025373844,2.1670986122624,1.63692417267876,2.78886314134739,0.964533054905707,2.99772693525535,1.16965804222704,1.50409737833809,1.53030665655075,1.76473135295612,1.85494268496337
|short_description=p2@Dok5
}}
}}

Latest revision as of 05:51, 26 September 2015

Short description:p2@Dok5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dok5_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 162bp_to_ENSMUST00000029075, NM_001163686, NM_029761, uc008ocg.2, uc012ckm.1_5end
EntrezGene:Dok5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dok5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.68e-1623
neuroblast (sensu Vertebrata)4.68e-1623
ectodermal cell2.32e-1344
neurectodermal cell2.32e-1344
neural cell4.49e-1343
neuron3.54e-1233
neuronal stem cell3.54e-1233
neuroblast3.54e-1233
electrically signaling cell3.54e-1233
electrically responsive cell1.35e-0939
electrically active cell1.35e-0939

Uber anatomy
Ontology termp-valuen
nervous system6.36e-2975
central nervous system2.22e-2773
regional part of nervous system8.58e-2754
neural tube8.40e-2652
neural rod8.40e-2652
future spinal cord8.40e-2652
neural keel8.40e-2652
neurectoderm8.44e-2664
neural plate8.44e-2664
presumptive neural plate8.44e-2664
ectoderm-derived structure5.86e-2595
ectoderm5.86e-2595
presumptive ectoderm5.86e-2595
gray matter5.62e-2434
ecto-epithelium7.30e-2373
regional part of brain2.38e-2146
brain1.44e-2047
future brain1.44e-2047
brain grey matter1.74e-2029
regional part of telencephalon1.74e-2029
telencephalon1.74e-2029
anterior neural tube7.23e-1940
pre-chordal neural plate8.67e-1949
regional part of forebrain5.31e-1839
forebrain5.31e-1839
future forebrain5.31e-1839
structure with developmental contribution from neural crest5.72e-1692
cerebral cortex1.40e-1521
cerebral hemisphere1.40e-1521
pallium1.40e-1521
regional part of cerebral cortex5.58e-1217
occipital lobe5.51e-1110
visual cortex5.51e-1110
neocortex5.51e-1110
posterior neural tube1.77e-0712
chordal neural plate1.77e-0712
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