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FFCP PHASE1:Mm9::chr1:108068350..108068456,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=98432
|EntrezGene=98432
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q8CHE4
|UniProt=Q8CHE4
|association_with_transcript=0bp_to_NM_133821,uc007cgu.2,uc007cgv.2_5end
|association_with_transcript=0bp_to_NM_133821,uc007cgu.2,uc007cgv.2_5end
|cluster_id=chr1:108068350..108068456,+
|description=CAGE_peak_1_at_Phlpp1_5end
|description=CAGE_peak_1_at_Phlpp1_5end
|id=chr1:108068350..108068456,+
|id=chr1:108068350..108068456,+
|ontology_enrichment_celltype=CL:0002321!9.31e-11!70;CL:0000220!9.31e-11!70;CL:0000221!4.32e-09!44;CL:0000133!4.32e-09!44;CL:0002319!1.15e-08!43;CL:0000117!4.98e-08!23;CL:0000337!4.98e-08!23;CL:0000055!2.25e-07!50
|ontology_enrichment_celltype=CL:0002321!9.31e-11!70;CL:0000220!9.31e-11!70;CL:0000221!4.32e-09!44;CL:0000133!4.32e-09!44;CL:0002319!1.15e-08!43;CL:0000117!4.98e-08!23;CL:0000337!4.98e-08!23;CL:0000055!2.25e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002321,8.96e-11,70;CL:0000221,4.19e-09,44;CL:0000133,4.19e-09,44;CL:0002319,1.12e-08,43;CL:0000117,4.85e-08,23;CL:0000337,4.85e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.34e-20!73;UBERON:0005743!1.34e-20!73;UBERON:0000033!1.31e-19!63;UBERON:0004111!1.78e-19!122;UBERON:0000073!3.64e-19!75;UBERON:0001016!3.64e-19!75;UBERON:0004121!4.05e-18!102;UBERON:0000924!4.05e-18!102;UBERON:0006601!4.05e-18!102;UBERON:0001049!8.14e-17!52;UBERON:0005068!8.14e-17!52;UBERON:0006241!8.14e-17!52;UBERON:0007135!8.14e-17!52;UBERON:0000955!1.57e-16!50;UBERON:0006238!1.57e-16!50;UBERON:0000025!1.70e-16!114;UBERON:0002616!6.30e-16!49;UBERON:0002346!3.56e-15!71;UBERON:0003075!3.56e-15!71;UBERON:0007284!3.56e-15!71;UBERON:0002020!4.48e-13!34;UBERON:0003056!1.31e-12!49;UBERON:0002791!4.75e-11!29;UBERON:0003528!4.75e-11!29;UBERON:0001893!4.75e-11!29;UBERON:0003080!7.07e-11!40;UBERON:0002780!2.77e-10!39;UBERON:0001890!2.77e-10!39;UBERON:0006240!2.77e-10!39;UBERON:0000956!1.07e-08!21;UBERON:0001869!1.07e-08!21;UBERON:0000203!1.07e-08!21;UBERON:0000119!3.99e-08!183;UBERON:0000483!4.43e-08!181;UBERON:0002619!1.28e-07!17;UBERON:0003076!3.50e-07!12;UBERON:0003057!3.50e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.82e-21,95;UBERON:0000924,3.82e-21,95;UBERON:0006601,3.82e-21,95;UBERON:0001017,1.24e-20,73;UBERON:0004111,2.92e-19,122;UBERON:0001016,3.38e-19,75;UBERON:0010314,4.84e-19,92;UBERON:0002346,9.99e-19,64;UBERON:0003075,9.99e-19,64;UBERON:0007284,9.99e-19,64;UBERON:0000073,3.92e-18,54;UBERON:0010371,1.79e-17,73;UBERON:0001049,7.63e-17,52;UBERON:0005068,7.63e-17,52;UBERON:0006241,7.63e-17,52;UBERON:0007135,7.63e-17,52;UBERON:0000025,2.72e-16,114;UBERON:0000955,1.27e-14,47;UBERON:0006238,1.27e-14,47;UBERON:0002616,4.89e-14,46;UBERON:0002020,4.26e-13,34;UBERON:0003056,1.25e-12,49;UBERON:0003528,4.56e-11,29;UBERON:0002791,4.56e-11,29;UBERON:0001893,4.56e-11,29;UBERON:0003080,6.80e-11,40;UBERON:0002780,2.67e-10,39;UBERON:0001890,2.67e-10,39;UBERON:0006240,2.67e-10,39;UBERON:0000119,2.51e-09,176;UBERON:0000483,2.77e-09,174;UBERON:0000956,1.04e-08,21;UBERON:0001869,1.04e-08,21;UBERON:0000203,1.04e-08,21;UBERON:0002619,1.24e-07,17;UBERON:0003076,3.41e-07,12;UBERON:0003057,3.41e-07,12
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88854195,2.56225712748541,2.6175594198403,1.42576470620972,12.4267862617385,2.81846469342095,2.8408143748356,2.31641886639937,3.11121901350476,4.1331143512874,3.21016638432478,3.40335992072686,2.8644964665669,1.67774951081137,0.724752362478018,1.44015003128933,0.632022241256357,1.41907650703115,1.1298205288131,0.25984164595559,0.895133478337407,0.596044064343795,0.721172697119813,0.590758108698309,0.201932899896295,0.533447646584999,0.403304740547362,0.487289403698762,0.673482891482306,0.467507608726276,5.8949899739955,1.99787358036658,1.34570784914214,2.85403847818933,13.3300819882211,2.43987218086537,3.29672923681077,6.64541975145104,6.52043735245972,10.1655331671072,9.20650473014354,12.6037012956667,11.5141632170271,9.59115527678899,15.8632718451837,17.550585006027,16.6618845192962,12.6879874515577,15.0150490408028,1.3492355185943,5.1873233542134,2.73173769206615,4.132814190161,1.88651846365184,3.12533964365024,4.00044110042907,3.5025959730612,5.45562656306086,2.27427490587418,3.29523089857312,3.58390048633545,3.7456602987953,4.8018864303652,4.99688579913835,5.71552429539688,5.79421629724277,5.78727661391115,4.12085900803307,3.09117732282234,4.4573002810104,4.43689515398344,2.86123427936785,5.52316383202848,3.57615645578256,3.63842813934209,3.10977553883713,2.10455769150274,5.29636043998861,3.36685362994643,4.27086065247027,4.82671963640261,2.45538625901814,3.40861050609125,3.47231899766054,8.49355964989016,6.55008503647143,3.43793686477277,5.16478496585877,2.42650561031467,3.2461496986859
|phase1_expression=4.96461426024861,2.44282785347553,5.45999087267443,5.14189159221611,4.00716583957078,11.9194283057442,8.87728034262997,1.54947988129892,3.66050677594334,2.34064526321993,0.171217968225505,0.159544317990673,1.19840510951844,0.174840804837995,1.99865857089398,0.404950534779652,0.699561878128147,0.946386496074713,0.685572168028694,2.12194825899015,8.92954546586233,0.297872853602656,1.04479915655574,2.3998863419011,2.98232065387321,3.44539178469012,4.73838195774982,6.24866574789078,2.28028103347649,2.01624103807945,3.76941868114018,0,0.61506478758457,0,15.5979874665688,11.6364251750945,15.1085323634153,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0,1.00717454380462,1.62203089951223,1.10128051297009,6.25913075478431,19.6222640742402,10.3252505885202,12.0546537426056,10.4989816219022,18.6878333674463,5.87239121202077,2.17608642603403,0.672187598284928,4.3734104126111,5.73066879877513,4.64104883049698,7.68802551266472,6.34789175126439,5.07065122804943,4.40497891689872,3.55717918444456,4.04954872776629,9.88866362566974,0.7104801149461,11.085204089181,14.9845139075406,8.50254820929517,5.26523159493594,9.04397333810943,15.4251531578054,10.8225585066291,5.51208596467293,5.07980996396653,7.35375029288017,37.4393995397922,30.2618991261895,30.8749131845049,7.38563211289086,4.20843160571084,4.16730696445408,33.2227768811643,28.7008931116157,31.1708425464693,10.606629077052,10.3931326983345,8.01517617048792,1.51452386666368,1.81371744256285,11.5945795480671,7.74381489283248,4.75979933595425,10.7940638327563,12.3457519315057,7.6164570806547,5.33688796500657,7.49893419343454,4.1565760736459,4.24007489412408,12.6759077799012,2.56652954828636,2.54805239706646,7.11066703153331,7.36069539438128,5.32055717497707,6.0662933401774,5.59501010623394,0.258937883647172,3.71105347662062,2.25530924795977,2.74018930480927,1.38369298353635,1.65794904607885,1.88141931417128,3.51866455723091,4.6967043869531,6.2177723475562,0.884610551949874,3.88240439873782,5.52103796150984,2.42437626567611,3.72783522436244,15.517382241612,24.2958179903608,3.83185582812887,1.7972268675888,1.79970819298022,0.635351135365324,34.1522657842996,32.4825428001225,5.27748278874031,14.6012428961512,9.71718737855256,37.4018480207208,18.1710214635889,4.27725328171328,3.23458123586242,1.26361379216837,4.8401626853889,4.16385417480652,5.74755261083682,3.60124259610698,6.78171680260718,12.1104968489364,9.99287018221828,16.6789069716317,8.53721123438752,2.80238390812695,3.21480336285293,3.51902248327898,2.6303487891309,1.66828349535359,3.1342694986995,3.90986059175093,4.77682240364384,0,0.257347907114715,0.284163499395593,2.69263504296152,3.04883877975425,3.78130329068131,5.44512891845984,5.50939848892731,8.02188987014367,6.27841650826101,8.04820204198858,5.95503246072564,6.08871444679878,6.895033491322,11.5117709555115,12.1345989563026,7.90380415047782,11.4075455946316,21.6598647021051,6.5858951922742,2.31293148088659,2.11560453330835,2.55945900642281,3.25131340604614,3.8660238396628,4.84040459096022,1.55664630691409,2.66315876557583,4.2707615539006,1.4822905925161,1.75934646160189,2.58643413653496,2.53453313254856,3.59527763461689,3.24207074812041,4.97853183135918,1.89667900953082,2.51346727741403,1.1270773567308,1.4255592949172,2.71533482034676,2.94570443539338,3.28829993046138,4.28069429140846,4.70996183524124,6.29325536001183,6.81841042300442,1.16791574001266,1.37591296579242,0.899448449539415,0.811440485554012,1.4470629585145,0.763877555344259,0.863088412352432,1.45921704097532,3.29473695825698,10.0637744569148,5.20997326735905,4.36852742360385,9.85057623993736,4.30553792452589,10.1313139486307,17.3667998756608,2.4633883530163,2.60743962307241,2.8856664581782,1.40814148973101,3.68513766371995,6.18913466303636,15.4155581807661,7.72412206120336,9.52298165489732,16.9022054776936,19.6635977658886,9.84304396635605,15.9113964439663,9.04747703635634,7.07077388964322,8.35999264132362,5.24279817978992,43.8303110666672,37.9765864558738,3.93443868904021,5.55436039849621,3.47059041357882,5.0757036758563,7.10897212518236,3.10659437338318,2.22798674082394,5.37845408498782,2.02405350837447,5.26060544240361,5.13874111330481,18.6366363524648,3.26462195979018,4.09550888434687,4.72372182125371,2.96946221350564,0,2.6705869977048,1.51161778482376,1.50884063804718,1.77181135728464,3.07435147943927,4.39328098385976,3.99887102425256,3.56497378384721,3.47640433729398,2.10837217149998,4.12542172992747,3.74483566329167,3.78128297465751,2.71653235943784,4.71541477069503,3.54680467284547,3.21063871683727,4.27827453565514,4.26250928760439,3.75474732901937,3.38931313382112,15.8780446599573,1.97863503529776,1.93757312035087,2.53314284698255,2.50681922406587,5.41664969158702,2.91480836629851,57.6672689252685,0.854354403989263,3.09580301944834,1.48155621895769,0.941842285023455,0.683471138605126,0.915112692826091,0.849892149969277,1.53946597556024,2.62579950228405,3.81868247206045,1.10717597753397,3.04979200690273,2.05210147561422,3.13632444021703,1.9652630737156,2.29269388854195,2.56225712748541,2.6175594198403,1.42576470620972,12.4267862617385,2.81846469342095,2.8408143748356,2.31641886639937,3.11121901350476,4.1331143512874,3.21016638432478,3.40335992072686,2.8644964665669,1.67774951081137,0.724752362478018,1.44015003128933,0.632022241256357,1.41907650703115,1.1298205288131,0.25984164595559,0.895133478337407,0.596044064343795,0.721172697119813,0.590758108698309,0.201932899896295,0.533447646584999,0.403304740547362,0.487289403698762,0.673482891482306,0.467507608726276,5.8949899739955,1.99787358036658,1.34570784914214,2.85403847818933,13.3300819882211,2.43987218086537,3.29672923681077,6.64541975145104,6.52043735245972,10.1655331671072,9.20650473014354,12.6037012956667,11.5141632170271,9.59115527678899,15.8632718451837,17.550585006027,16.6618845192962,12.6879874515577,15.0150490408028,1.3492355185943,5.1873233542134,2.73173769206615,4.132814190161,1.88651846365184,3.12533964365024,4.00044110042907,3.5025959730612,5.45562656306086,2.27427490587418,3.29523089857312,3.58390048633545,3.7456602987953,4.8018864303652,4.99688579913835,5.71552429539688,5.79421629724277,5.78727661391115,4.12085900803307,3.09117732282234,4.4573002810104,4.43689515398344,2.86123427936785,5.52316383202848,3.57615645578256,3.63842813934209,3.10977553883713,2.10455769150274,5.29636043998861,3.36685362994643,4.27086065247027,4.82671963640261,2.45538625901814,3.40861050609125,3.47231899766054,8.49355964989016,6.55008503647143,3.43793686477277,5.16478496585877,2.42650561031467,3.2461496986859
|short_description=p1@Phlpp1
|short_description=p1@Phlpp1
}}
}}

Latest revision as of 05:41, 26 September 2015

Short description:p1@Phlpp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Phlpp1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_NM_133821, uc007cgu.2, uc007cgv.2_5end
EntrezGene:Phlpp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Phlpp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.92
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H16.22
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I224.30
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A434.15
corpus striatum, adult.CNhs10487.19-21D832.48
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F237.40
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C612.11
eyeball, neonate N01.CNhs11140.1532-43E79.99
eyeball, neonate N02.CNhs11205.1551-44G816.68
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C68.02
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G111.51
heart, neonate N20.CNhs11127.821-26I612.13
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E821.66
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H16.29
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C615.42
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E616.90
lung, neonate N20.CNhs11109.822-18A419.66
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H215.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C243.83
medulla oblongata, neonate N30.CNhs11200.1396-42A337.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F815.88
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.53
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C957.67
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E413.33
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell8.96e-1170
ectodermal cell4.19e-0944
neurectodermal cell4.19e-0944
neural cell1.12e-0843
CNS neuron (sensu Vertebrata)4.85e-0823
neuroblast (sensu Vertebrata)4.85e-0823

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.82e-2195
ectoderm3.82e-2195
presumptive ectoderm3.82e-2195
central nervous system1.24e-2073
anatomical conduit2.92e-19122
nervous system3.38e-1975
structure with developmental contribution from neural crest4.84e-1992
neurectoderm9.99e-1964
neural plate9.99e-1964
presumptive neural plate9.99e-1964
regional part of nervous system3.92e-1854
ecto-epithelium1.79e-1773
neural tube7.63e-1752
neural rod7.63e-1752
future spinal cord7.63e-1752
neural keel7.63e-1752
tube2.72e-16114
brain1.27e-1447
future brain1.27e-1447
regional part of brain4.89e-1446
gray matter4.26e-1334
pre-chordal neural plate1.25e-1249
brain grey matter4.56e-1129
regional part of telencephalon4.56e-1129
telencephalon4.56e-1129
anterior neural tube6.80e-1140
regional part of forebrain2.67e-1039
forebrain2.67e-1039
future forebrain2.67e-1039
cell layer2.51e-09176
epithelium2.77e-09174
cerebral cortex1.04e-0821
cerebral hemisphere1.04e-0821
pallium1.04e-0821
regional part of cerebral cortex1.24e-0717
posterior neural tube3.41e-0712
chordal neural plate3.41e-0712
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