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FFCP PHASE1:Mm9::chr5:75073839..75073898,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16924
|EntrezGene=16924
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O70263,E9Q4N3,E9Q6Q0,D6RHN7,D3YTM4,Q3UUJ9,A4QPD4
|UniProt=O70263,E9Q4N3,E9Q6Q0,D6RHN7,D3YTM4,Q3UUJ9,A4QPD4
|association_with_transcript=0bp_to_ENSMUST00000039744,ENSMUST00000113531,ENSMUST00000121690,ENSMUST00000127396,ENSMUST00000153543,NM_001159578,NM_001159579,NM_001159580,NM_010727,uc008xtq.2,uc008xtr.2,uc008xts.2,uc008xtu.2,uc012dxi.1_5end
|association_with_transcript=0bp_to_ENSMUST00000039744,ENSMUST00000113531,ENSMUST00000121690,ENSMUST00000127396,ENSMUST00000153543,NM_001159578,NM_001159579,NM_001159580,NM_010727,uc008xtq.2,uc008xtr.2,uc008xts.2,uc008xtu.2,uc012dxi.1_5end
|cluster_id=chr5:75073839..75073898,-
|description=CAGE_peak_2_at_Lnx1_5end
|description=CAGE_peak_2_at_Lnx1_5end
|id=chr5:75073839..75073898,-
|id=chr5:75073839..75073898,-
|ontology_enrichment_celltype=CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000055!3.24e-08!50;CL:0002319!2.21e-07!43;CL:0000393!3.55e-07!39;CL:0000211!3.55e-07!39;CL:0000221!3.70e-07!44;CL:0000133!3.70e-07!44
|ontology_enrichment_celltype=CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000055!3.24e-08!50;CL:0002319!2.21e-07!43;CL:0000393!3.55e-07!39;CL:0000211!3.55e-07!39;CL:0000221!3.70e-07!44;CL:0000133!3.70e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-09,23;CL:0000337,1.13e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.64e-22!73;UBERON:0005743!1.64e-22!73;UBERON:0002346!3.93e-22!71;UBERON:0003075!3.93e-22!71;UBERON:0007284!3.93e-22!71;UBERON:0000073!7.17e-22!75;UBERON:0001016!7.17e-22!75;UBERON:0004121!1.41e-21!102;UBERON:0000924!1.41e-21!102;UBERON:0006601!1.41e-21!102;UBERON:0001049!1.78e-21!52;UBERON:0005068!1.78e-21!52;UBERON:0006241!1.78e-21!52;UBERON:0007135!1.78e-21!52;UBERON:0000955!2.15e-20!50;UBERON:0006238!2.15e-20!50;UBERON:0000033!3.15e-20!63;UBERON:0002616!1.20e-19!49;UBERON:0003056!3.12e-16!49;UBERON:0002020!3.13e-16!34;UBERON:0003080!6.43e-15!40;UBERON:0002780!3.13e-14!39;UBERON:0001890!3.13e-14!39;UBERON:0006240!3.13e-14!39;UBERON:0000025!5.11e-14!114;UBERON:0002791!2.53e-13!29;UBERON:0003528!2.53e-13!29;UBERON:0001893!2.53e-13!29;UBERON:0004111!4.68e-12!122;UBERON:0000956!4.12e-09!21;UBERON:0001869!4.12e-09!21;UBERON:0000203!4.12e-09!21;UBERON:0002619!6.99e-09!17;UBERON:0007811!2.03e-08!86;UBERON:0002021!2.86e-08!10;UBERON:0000411!2.86e-08!10;UBERON:0001950!2.86e-08!10;UBERON:0003076!2.23e-07!12;UBERON:0003057!2.23e-07!12;UBERON:0000468!2.80e-07!333;UBERON:0000153!8.64e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.57e-25,54;UBERON:0001017,6.48e-24,73;UBERON:0001049,2.79e-23,52;UBERON:0005068,2.79e-23,52;UBERON:0006241,2.79e-23,52;UBERON:0007135,2.79e-23,52;UBERON:0001016,1.25e-22,75;UBERON:0002346,5.64e-22,64;UBERON:0003075,5.64e-22,64;UBERON:0007284,5.64e-22,64;UBERON:0010314,1.64e-20,92;UBERON:0000955,1.04e-19,47;UBERON:0006238,1.04e-19,47;UBERON:0004121,5.42e-19,95;UBERON:0000924,5.42e-19,95;UBERON:0006601,5.42e-19,95;UBERON:0002616,7.57e-19,46;UBERON:0002020,2.36e-17,34;UBERON:0010371,2.51e-17,73;UBERON:0003056,2.42e-16,49;UBERON:0003080,1.74e-15,40;UBERON:0002780,1.10e-14,39;UBERON:0001890,1.10e-14,39;UBERON:0006240,1.10e-14,39;UBERON:0003528,6.99e-14,29;UBERON:0002791,6.99e-14,29;UBERON:0001893,6.99e-14,29;UBERON:0000025,4.01e-13,114;UBERON:0004111,3.47e-11,122;UBERON:0002021,8.91e-10,10;UBERON:0000411,8.91e-10,10;UBERON:0001950,8.91e-10,10;UBERON:0002619,9.91e-10,17;UBERON:0000956,6.80e-09,21;UBERON:0001869,6.80e-09,21;UBERON:0000203,6.80e-09,21;UBERON:0003076,1.09e-08,12;UBERON:0003057,1.09e-08,12
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8629990649227,12.8748702648783,14.3166466686112,1.56478268869608,2.18025156380447,2.19686182734472,2.13872888981712,2.51975558925653,4.31257693094915,0,0,0,0.257259436035947,0.85960031981627,2.57836046138721,6.47412674750713,16.398720357433,6.97214543856797,0,0,0,0,0,10.4860038681442,3.84218305321555,0.414758449233911,0.945041568321835,1.68259969081106,24.2803336743233,29.5963844875162,1.71487118900936,1.0543001812006,0.919218786610021,27.5289702498472,20.9407234459708,29.1852413186863,10.1552441552249,13.9976094711687,8.85552729946492,24.2889209131201,23.6360296213306,24.90611438762,18.2669722993674,17.6540884190888,11.7431650869939,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,3.85949561568544,0.520455980298408,0.608930956624282,0.922461989024234,2.71300752994721,2.11659672844269,1.50799909595611,1.73036477414062,2.16899035379867,1.76922110389975,0.647067399789637,1.32504911076236,0.484875253135222,0,29.2780797011547,19.4785437336513,0,0,0,0,34.7514283419189,20.1300265240196,6.40837195775608,34.0695667576862,44.4944895754775,31.5837827730531,28.5544622999253,0.101839363850316,2.23932547098167,4.29628689337247,2.52530227063769,0.520481771850815,0.229902104433473,1.0803727788321,1.9591626318643,2.38127747029647,3.20284300712124,3.74806898238915,15.78090561508,0,0,0,0,0,2.43776516565517,2.88094990971121,0,0,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.710234206755631,0.983821158737019,1.69693824176116,0.465067889500816,1.07309360559848,1.16765342367169,1.81015834904829,8.20837320395476,7.37726166867287,8.77199924551994,14.0512073786272,4.96563749413376,18.0849355765149,7.40913209130848,0,0,0.853153002140936,0.696710015581316,0.257734922644187,0,1.11189021922435,0.380451252225118,0,0.494096864172033,1.50801125280162,1.1937388322469,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.651859905768103,1.18821560042632,1.17345124144251,3.01511263395268,4.76087281772027,1.95133647857799,1.10344600874334,0.664394068946325,1.11618338060241,0.491589944147214,1.38147985492716,0.289298117163023,0,0,0,0.275936746304732,35.481680387302,29.3029216480508,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,37.2732727049296,2.6968616189571,1.24645922567079,0.81443479676788,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.712994756769443,0.316036757935816,0,0,7.48967132658334,0.18006109403131,0,0.428674070063185,1.24138163549592,1.78368817602071,3.45552943264454,5.17590413494819,0,0.42366414172764,0,0.98931751764888,0.322928853391811,0.301564624640779,0.119372344003136,0,0.582961673259701,31.5223013417866,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.743881101528023,0.785267825952089,0,0,1.12738587736838,0.149516546043979,0,0.388902376688095,0.129159823477731,0.506868376472335,0.117357238645754,0.911430693907651,3.04092098834561,5.55643477899814,4.32045009386798,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,46.8744029372165,37.2863441570813,39.5297904273184,24.4031518928036,32.8839609489908,31.7265436903674,32.4010800111267,30.1715206160228,29.4542565839733,32.6188996403647,0,0,0.682934423016537,0.972426868273176,1.46729213839588,0.735374033800057,3.55594764482584,4.12070114477788,3.53011130550997,3.03236654116557,3.54871019846336,3.01802146217722,1.96647165686753,2.24088033417042,3.15895079255873,2.38146845641537,3.24476112645595,3.27945674788299,3.70877310722976,3.09117732282234,2.74295401908332,2.8396128985494,2.38436189947321,3.19762116591123,2.35273451038327,2.36920902096694,2.74391959309159,4.73525480588117,3.39510284614654,5.61142271657738,3.2031454893527,2.06859412988683,2.86461730218783,1.85924209423159,3.47231899766054,5.24602213669686,2.33931608445408,2.14871054048298,1.91288332068843,2.42650561031467,1.15933917810211
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8629990649227,12.8748702648783,14.3166466686112,1.56478268869608,2.18025156380447,2.19686182734472,2.13872888981712,2.51975558925653,4.31257693094915,0,0,0,0.257259436035947,0.85960031981627,2.57836046138721,6.47412674750713,16.398720357433,6.97214543856797,0,0,0,0,0,10.4860038681442,3.84218305321555,0.414758449233911,0.945041568321835,1.68259969081106,24.2803336743233,29.5963844875162,1.71487118900936,1.0543001812006,0.919218786610021,27.5289702498472,20.9407234459708,29.1852413186863,10.1552441552249,13.9976094711687,8.85552729946492,24.2889209131201,23.6360296213306,24.90611438762,18.2669722993674,17.6540884190888,11.7431650869939,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,3.85949561568544,0.520455980298408,0.608930956624282,0.922461989024234,2.71300752994721,2.11659672844269,1.50799909595611,1.73036477414062,2.16899035379867,1.76922110389975,0.647067399789637,1.32504911076236,0.484875253135222,0,29.2780797011547,19.4785437336513,0,0,0,0,34.7514283419189,20.1300265240196,6.40837195775608,34.0695667576862,44.4944895754775,31.5837827730531,28.5544622999253,0.101839363850316,2.23932547098167,4.29628689337247,2.52530227063769,0.520481771850815,0.229902104433473,1.0803727788321,1.9591626318643,2.38127747029647,3.20284300712124,3.74806898238915,15.78090561508,0,0,0,0,0,2.43776516565517,2.88094990971121,0,0,0,0,0.207125772535502,0.234526059981096,1.08037236876609,0.710234206755631,0.983821158737019,1.69693824176116,0.465067889500816,1.07309360559848,1.16765342367169,1.81015834904829,8.20837320395476,7.37726166867287,8.77199924551994,14.0512073786272,4.96563749413376,18.0849355765149,7.40913209130848,0,0,0.853153002140936,0.696710015581316,0.257734922644187,0,1.11189021922435,0.380451252225118,0,0.494096864172033,1.50801125280162,1.1937388322469,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.651859905768103,1.18821560042632,1.17345124144251,3.01511263395268,4.76087281772027,1.95133647857799,1.10344600874334,0.664394068946325,1.11618338060241,0.491589944147214,1.38147985492716,0.289298117163023,0,0,0,0.275936746304732,35.481680387302,29.3029216480508,0,0.504941854408746,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,37.2732727049296,2.6968616189571,1.24645922567079,0.81443479676788,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.712994756769443,0.316036757935816,0,0,7.48967132658334,0.18006109403131,0,0.428674070063185,1.24138163549592,1.78368817602071,3.45552943264454,5.17590413494819,0,0.42366414172764,0,0.98931751764888,0.322928853391811,0.301564624640779,0.119372344003136,0,0.582961673259701,31.5223013417866,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.743881101528023,0.785267825952089,0,0,1.12738587736838,0.149516546043979,0,0.388902376688095,0.129159823477731,0.506868376472335,0.117357238645754,0.911430693907651,3.04092098834561,5.55643477899814,4.32045009386798,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,46.8744029372165,37.2863441570813,39.5297904273184,24.4031518928036,32.8839609489908,31.7265436903674,32.4010800111267,30.1715206160228,29.4542565839733,32.6188996403647,0,0,0.682934423016537,0.972426868273176,1.46729213839588,0.735374033800057,3.55594764482584,4.12070114477788,3.53011130550997,3.03236654116557,3.54871019846336,3.01802146217722,1.96647165686753,2.24088033417042,3.15895079255873,2.38146845641537,3.24476112645595,3.27945674788299,3.70877310722976,3.09117732282234,2.74295401908332,2.8396128985494,2.38436189947321,3.19762116591123,2.35273451038327,2.36920902096694,2.74391959309159,4.73525480588117,3.39510284614654,5.61142271657738,3.2031454893527,2.06859412988683,2.86461730218783,1.85924209423159,3.47231899766054,5.24602213669686,2.33931608445408,2.14871054048298,1.91288332068843,2.42650561031467,1.15933917810211
|short_description=p2@Lnx1
|short_description=p2@Lnx1
}}
}}

Latest revision as of 05:20, 26 September 2015

Short description:p2@Lnx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lnx1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000039744, ENSMUST00000113531, ENSMUST00000121690, ENSMUST00000127396, ENSMUST00000153543, NM_001159578, NM_001159579, NM_001159580, NM_010727, uc008xtq.2, uc008xtr.2, uc008xts.2, uc008xtu.2, uc012dxi.1_5end
EntrezGene:Lnx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lnx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.75
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D534.07
cortex, neonate N30.CNhs11107.1392-42F244.49
diencephalon, adult.CNhs10482.20-12F231.58
diencephalon, neonate N30.CNhs11201.1388-42B228.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E818.08
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C235.48
medulla oblongata, neonate N30.CNhs11200.1396-42A329.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I937.27
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C931.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A339.53
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.13e-0923
neuroblast (sensu Vertebrata)1.13e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.57e-2554
central nervous system6.48e-2473
neural tube2.79e-2352
neural rod2.79e-2352
future spinal cord2.79e-2352
neural keel2.79e-2352
nervous system1.25e-2275
neurectoderm5.64e-2264
neural plate5.64e-2264
presumptive neural plate5.64e-2264
structure with developmental contribution from neural crest1.64e-2092
brain1.04e-1947
future brain1.04e-1947
ectoderm-derived structure5.42e-1995
ectoderm5.42e-1995
presumptive ectoderm5.42e-1995
regional part of brain7.57e-1946
gray matter2.36e-1734
ecto-epithelium2.51e-1773
pre-chordal neural plate2.42e-1649
anterior neural tube1.74e-1540
regional part of forebrain1.10e-1439
forebrain1.10e-1439
future forebrain1.10e-1439
brain grey matter6.99e-1429
regional part of telencephalon6.99e-1429
telencephalon6.99e-1429
tube4.01e-13114
anatomical conduit3.47e-11122
occipital lobe8.91e-1010
visual cortex8.91e-1010
neocortex8.91e-1010
regional part of cerebral cortex9.91e-1017
cerebral cortex6.80e-0921
cerebral hemisphere6.80e-0921
pallium6.80e-0921
posterior neural tube1.09e-0812
chordal neural plate1.09e-0812
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