FFCP PHASE1:Mm9::chr4:115894238..115894255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18710 | |EntrezGene=18710 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q64143 | |UniProt=Q64143 | ||
|association_with_transcript=-10bp_to_ENSMUST00000030464_5end | |association_with_transcript=-10bp_to_ENSMUST00000030464_5end | ||
|cluster_id=chr4:115894238..115894255,+ | |||
|description=CAGE_peak_1_at_Pik3r3_5end | |description=CAGE_peak_1_at_Pik3r3_5end | ||
|id=chr4:115894238..115894255,+ | |id=chr4:115894238..115894255,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.47e-17!33;CL:0000047!4.47e-17!33;CL:0000031!4.47e-17!33;CL:0000404!4.47e-17!33;CL:0000221!3.80e-14!44;CL:0000133!3.80e-14!44;CL:0002319!9.01e-14!43;CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000393!2.52e-12!39;CL:0000211!2.52e-12!39;CL:0002321!2.36e-10!70;CL:0000220!2.36e-10!70;CL:0000055!1.17e-09!50 | |ontology_enrichment_celltype=CL:0000540!4.47e-17!33;CL:0000047!4.47e-17!33;CL:0000031!4.47e-17!33;CL:0000404!4.47e-17!33;CL:0000221!3.80e-14!44;CL:0000133!3.80e-14!44;CL:0002319!9.01e-14!43;CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000393!2.52e-12!39;CL:0000211!2.52e-12!39;CL:0002321!2.36e-10!70;CL:0000220!2.36e-10!70;CL:0000055!1.17e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.09e-17,33;CL:0000047,4.09e-17,33;CL:0000031,4.09e-17,33;CL:0000404,4.09e-17,33;CL:0000221,3.53e-14,44;CL:0000133,3.53e-14,44;CL:0002319,8.39e-14,43;CL:0000117,1.12e-12,23;CL:0000337,1.12e-12,23;CL:0000393,2.37e-12,39;CL:0000211,2.37e-12,39;CL:0002321,1.96e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.11e-24!102;UBERON:0000924!3.11e-24!102;UBERON:0006601!3.11e-24!102;UBERON:0001017!9.89e-23!73;UBERON:0005743!9.89e-23!73;UBERON:0000073!1.95e-22!75;UBERON:0001016!1.95e-22!75;UBERON:0000033!2.99e-19!63;UBERON:0002346!6.44e-19!71;UBERON:0003075!6.44e-19!71;UBERON:0007284!6.44e-19!71;UBERON:0003056!2.18e-16!49;UBERON:0001049!4.68e-16!52;UBERON:0005068!4.68e-16!52;UBERON:0006241!4.68e-16!52;UBERON:0007135!4.68e-16!52;UBERON:0000955!3.99e-14!50;UBERON:0006238!3.99e-14!50;UBERON:0002616!6.76e-14!49;UBERON:0002020!5.13e-13!34;UBERON:0003080!2.74e-12!40;UBERON:0002780!5.48e-12!39;UBERON:0001890!5.48e-12!39;UBERON:0006240!5.48e-12!39;UBERON:0000153!5.60e-11!94;UBERON:0007811!9.47e-11!86;UBERON:0002791!1.49e-10!29;UBERON:0003528!1.49e-10!29;UBERON:0001893!1.49e-10!29;UBERON:0000956!3.39e-07!21;UBERON:0001869!3.39e-07!21;UBERON:0000203!3.39e-07!21 | |ontology_enrichment_uberon=UBERON:0004121!3.11e-24!102;UBERON:0000924!3.11e-24!102;UBERON:0006601!3.11e-24!102;UBERON:0001017!9.89e-23!73;UBERON:0005743!9.89e-23!73;UBERON:0000073!1.95e-22!75;UBERON:0001016!1.95e-22!75;UBERON:0000033!2.99e-19!63;UBERON:0002346!6.44e-19!71;UBERON:0003075!6.44e-19!71;UBERON:0007284!6.44e-19!71;UBERON:0003056!2.18e-16!49;UBERON:0001049!4.68e-16!52;UBERON:0005068!4.68e-16!52;UBERON:0006241!4.68e-16!52;UBERON:0007135!4.68e-16!52;UBERON:0000955!3.99e-14!50;UBERON:0006238!3.99e-14!50;UBERON:0002616!6.76e-14!49;UBERON:0002020!5.13e-13!34;UBERON:0003080!2.74e-12!40;UBERON:0002780!5.48e-12!39;UBERON:0001890!5.48e-12!39;UBERON:0006240!5.48e-12!39;UBERON:0000153!5.60e-11!94;UBERON:0007811!9.47e-11!86;UBERON:0002791!1.49e-10!29;UBERON:0003528!1.49e-10!29;UBERON:0001893!1.49e-10!29;UBERON:0000956!3.39e-07!21;UBERON:0001869!3.39e-07!21;UBERON:0000203!3.39e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.19e-26,95;UBERON:0000924,1.19e-26,95;UBERON:0006601,1.19e-26,95;UBERON:0001017,8.74e-23,73;UBERON:0001016,1.73e-22,75;UBERON:0002346,9.43e-22,64;UBERON:0003075,9.43e-22,64;UBERON:0007284,9.43e-22,64;UBERON:0010371,1.07e-21,73;UBERON:0010314,3.16e-18,92;UBERON:0000073,1.84e-16,54;UBERON:0003056,2.00e-16,49;UBERON:0001049,4.30e-16,52;UBERON:0005068,4.30e-16,52;UBERON:0006241,4.30e-16,52;UBERON:0007135,4.30e-16,52;UBERON:0000955,1.64e-13,47;UBERON:0006238,1.64e-13,47;UBERON:0002616,2.76e-13,46;UBERON:0002020,4.80e-13,34;UBERON:0003080,2.57e-12,40;UBERON:0002780,5.15e-12,39;UBERON:0001890,5.15e-12,39;UBERON:0006240,5.15e-12,39;UBERON:0003528,1.41e-10,29;UBERON:0002791,1.41e-10,29;UBERON:0001893,1.41e-10,29;UBERON:0000956,3.28e-07,21;UBERON:0001869,3.28e-07,21;UBERON:0000203,3.28e-07,21 | |||
|phase1_expression=10.4096750618116,15.0059425284925,17.2899710968024,9.37639055051173,8.5152274090879,16.6200479192771,11.4470193891808,4.39019299701359,1.40788722151667,2.34064526321993,0,0.0797721589953364,1.19840510951844,1.48614684112296,0,0,0.699561878128147,0.157731082679119,0.274228867211478,0,8.84450217571126,0.297872853602656,0.522399578277871,8.15961356246374,6.19405058881359,9.76194338995534,18.0920038386811,14.8675150553263,1.33016393619462,1.26015064879965,3.54768817048488,6.35030673459631,7.38077745101484,0,4.04392267651784,0.997407872150954,6.32925004413344,0.418531630736908,0,0,0,1.36609096991689,0,3.14742044938943,2.53442328048786,5.32285581268876,3.9119567217402,3.92445281484804,7.0299578475031,7.97162586204562,4.89952475688769,5.75010257459886,0.335565212115473,2.17608642603403,2.01656279485478,2.05807548828758,1.43266719969378,1.03134418455488,26.5034563726073,29.6234948392338,35.494558596346,5.42151251310611,8.00365316500025,1.7997994345628,0.988866362566974,0,5.39280198933128,6.14749288514487,34.8397097356485,25.2461104680262,25.2389953621658,15.7108041422092,13.2521124570968,26.70299422886,38.529879349331,35.8495326777908,6.60695285996332,14.1732945274558,11.8277030607307,30.2019598902144,42.4502666315181,31.2548022334056,15.0758819460746,9.56696437053856,12.835052813252,16.4992007865254,22.6370972470574,20.5039390407831,2.72614295999463,10.2777321745228,17.3918693221007,0.860423876981386,0,0.539703191637817,0,0,4.21333260395256,9.71452838694929,7.79358013808606,7.0667914902068,12.8167511996779,52.6138557398703,33.1246811618639,49.7746692207332,4.76280290224671,6.33399663687746,6.0662933401774,3.31133251185274,4.14300613835475,7.57054909230606,6.93941307064543,1.82679286987285,2.07553947530453,4.22023393547343,2.70454026412121,4.90099706185734,1.23597483867187,3.32578520915797,1.76922110389975,3.88240439873782,3.09178125844551,1.45462575940567,7.45567044872489,33.0842300623048,49.8483162216023,2.04365644166873,0.11981512450592,0.599902730993408,0.127070227073065,11.6836698735762,8.6925114535539,19.8533876338326,7.64827008846016,8.95004100656157,7.06479351502504,11.356888414743,2.34230536855727,3.35898820647251,6.82351447770922,9.89076722666428,14.5734896118228,14.2539304748753,12.4242869565691,17.6324636867787,14.9680298132921,24.8540617352609,20.9891863013793,16.815719098036,11.8562396113063,14.9393803332577,12.4925298156404,5.91828477554452,6.95118123063995,2.78601733217733,3.70407845534298,3.98068533636986,0,0.257347907114715,0,10.1491628542396,7.97388603935727,7.20248245844059,7.33908680314152,7.67380503814875,6.32495162838251,7.20855228726264,3.21928081679543,6.889155199663,7.73431294593358,11.984224877774,9.56611952641098,5.26319954731196,5.48875288227627,5.2340503316545,8.20130799400096,15.9502149187891,0.991256348951394,1.58670339998127,8.10495352033889,6.27039014023184,5.02583099156164,2.42020229548011,2.44615848229357,1.71203063501303,1.42358718463353,1.64698954724011,2.5133520880027,2.38747766449381,4.09424582950152,2.69645822596266,4.32276099749388,3.58454291857861,3.79335801906163,9.02563249616858,9.01661885384643,8.34970444165788,5.62462212786115,6.24208797023835,13.6590920188396,9.15182917473533,12.2459007716272,7.28043267138623,0.592905254174298,1.66845105716094,0.393117990226406,0.224862112384854,0.811440485554012,1.4470629585145,1.2731292589071,1.72617682470486,0.486405680325106,0.823684239564244,0,2.23284568601102,1.5601883655728,0.757736633841335,0.896987067609561,1.4473305640901,4.43407656399851,8.7166049414423,10.9186534216157,11.5426658327128,8.21415869009757,8.04030035720716,5.71304738126433,11.7080188714679,10.719189799221,14.6166695168191,14.5103839478313,7.53771247692395,11.9152637487468,7.37710198765709,0,0.54390568381871,6.88469982226651,4.69092468718045,10.1146871692309,14.1826140776566,1.96721934452011,4.79694761688309,12.6203287766503,11.7131623288992,16.1567548299599,22.2240982095873,21.1658740378274,24.0615051170508,14.1683745586213,13.7360253218317,16.2067988958075,9.96096080907602,6.95506417520516,3.5613120733451,4.0721739838394,10.5580878702423,1.32745138339963,3.39892890616974,1.51161778482376,2.45186603682668,2.95301892880773,3.68922177532713,2.32585463851399,6.18007340111759,2.13898427030833,0.948110273807448,0,1.03135543248187,13.2771446243977,20.3469036255381,10.0899773350549,10.2881776815164,12.4138163549592,10.5237602385222,8.55654907131029,1.522324745573,4.22409074514679,9.74427525973573,9.04166432025344,7.91454014119104,2.09903754704677,7.17723806645055,7.5204576721976,11.1615811826642,2.91480836629851,10.7546675166096,0.683483523191411,4.33412422722767,2.40752885580625,2.26042148405629,0.820165366326151,1.37266903923914,0.169978429993855,0.139951452323658,0.138199973804424,0,7.59206384594725,7.31950081656655,5.40026704109006,3.13632444021703,5.45906409365444,5.52943820177765,4.62859352061881,6.54389854960074,8.55458823725833,5.59205381778233,3.94585057078933,5.38259565758324,4.13646226142744,1.75006069509643,2.32487682259916,2.7032980078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| ||
|short_description=p1@Pik3r3 | |short_description=p1@Pik3r3 | ||
}} | }} |
Latest revision as of 04:55, 26 September 2015
Short description: | p1@Pik3r3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pik3r3_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_ENSMUST00000030464_5end |
EntrezGene: | Pik3r3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.09e-17 | 33 |
neuronal stem cell | 4.09e-17 | 33 |
neuroblast | 4.09e-17 | 33 |
electrically signaling cell | 4.09e-17 | 33 |
ectodermal cell | 3.53e-14 | 44 |
neurectodermal cell | 3.53e-14 | 44 |
neural cell | 8.39e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.12e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-12 | 23 |
electrically responsive cell | 2.37e-12 | 39 |
electrically active cell | 2.37e-12 | 39 |
embryonic cell | 1.96e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.19e-26 | 95 |
ectoderm | 1.19e-26 | 95 |
presumptive ectoderm | 1.19e-26 | 95 |
central nervous system | 8.74e-23 | 73 |
nervous system | 1.73e-22 | 75 |
neurectoderm | 9.43e-22 | 64 |
neural plate | 9.43e-22 | 64 |
presumptive neural plate | 9.43e-22 | 64 |
ecto-epithelium | 1.07e-21 | 73 |
structure with developmental contribution from neural crest | 3.16e-18 | 92 |
regional part of nervous system | 1.84e-16 | 54 |
pre-chordal neural plate | 2.00e-16 | 49 |
neural tube | 4.30e-16 | 52 |
neural rod | 4.30e-16 | 52 |
future spinal cord | 4.30e-16 | 52 |
neural keel | 4.30e-16 | 52 |
brain | 1.64e-13 | 47 |
future brain | 1.64e-13 | 47 |
regional part of brain | 2.76e-13 | 46 |
gray matter | 4.80e-13 | 34 |
anterior neural tube | 2.57e-12 | 40 |
regional part of forebrain | 5.15e-12 | 39 |
forebrain | 5.15e-12 | 39 |
future forebrain | 5.15e-12 | 39 |
brain grey matter | 1.41e-10 | 29 |
regional part of telencephalon | 1.41e-10 | 29 |
telencephalon | 1.41e-10 | 29 |
cerebral cortex | 3.28e-07 | 21 |
cerebral hemisphere | 3.28e-07 | 21 |
pallium | 3.28e-07 | 21 |