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FFCP PHASE1:Mm9::chr19:8994848..8994916,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72727
|EntrezGene=72727
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P58158,Q3USF3
|UniProt=P58158,Q3USF3
|association_with_transcript=0bp_to_ENSMUST00000096243,NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end
|association_with_transcript=0bp_to_ENSMUST00000096243,NM_024256,uc008gnz.1,uc008goa.1,uc008gob.1_5end
|cluster_id=chr19:8994848..8994916,+
|description=CAGE_peak_1_at_B3gat3_5end
|description=CAGE_peak_1_at_B3gat3_5end
|id=chr19:8994848..8994916,+
|id=chr19:8994848..8994916,+
|ontology_enrichment_celltype=CL:0000117!4.98e-12!23;CL:0000337!4.98e-12!23;CL:0000221!3.04e-08!44;CL:0000133!3.04e-08!44;CL:0002319!7.15e-08!43
|ontology_enrichment_celltype=CL:0000117!4.98e-12!23;CL:0000337!4.98e-12!23;CL:0000221!3.04e-08!44;CL:0000133!3.04e-08!44;CL:0002319!7.15e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.98e-12,23;CL:0000337,4.98e-12,23;CL:0000221,3.04e-08,44;CL:0000133,3.04e-08,44;CL:0002319,7.15e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.82e-25!63;UBERON:0001049!1.89e-23!52;UBERON:0005068!1.89e-23!52;UBERON:0006241!1.89e-23!52;UBERON:0007135!1.89e-23!52;UBERON:0000955!5.57e-23!50;UBERON:0006238!5.57e-23!50;UBERON:0000073!9.05e-23!75;UBERON:0001016!9.05e-23!75;UBERON:0002616!2.40e-22!49;UBERON:0001017!3.33e-22!73;UBERON:0005743!3.33e-22!73;UBERON:0004121!9.35e-21!102;UBERON:0000924!9.35e-21!102;UBERON:0006601!9.35e-21!102;UBERON:0003056!7.99e-19!49;UBERON:0002346!1.80e-18!71;UBERON:0003075!1.80e-18!71;UBERON:0007284!1.80e-18!71;UBERON:0003080!3.63e-17!40;UBERON:0002020!1.07e-16!34;UBERON:0002780!1.82e-16!39;UBERON:0001890!1.82e-16!39;UBERON:0006240!1.82e-16!39;UBERON:0007811!1.21e-15!86;UBERON:0000153!2.36e-14!94;UBERON:0002791!2.49e-14!29;UBERON:0003528!2.49e-14!29;UBERON:0001893!2.49e-14!29;UBERON:0000956!6.28e-10!21;UBERON:0001869!6.28e-10!21;UBERON:0000203!6.28e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0002021!2.84e-07!10;UBERON:0000411!2.84e-07!10;UBERON:0001950!2.84e-07!10;UBERON:0003076!6.27e-07!12;UBERON:0003057!6.27e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.90e-25,54;UBERON:0004121,7.95e-24,95;UBERON:0000924,7.95e-24,95;UBERON:0006601,7.95e-24,95;UBERON:0001049,1.89e-23,52;UBERON:0005068,1.89e-23,52;UBERON:0006241,1.89e-23,52;UBERON:0007135,1.89e-23,52;UBERON:0001016,9.05e-23,75;UBERON:0002346,2.69e-22,64;UBERON:0003075,2.69e-22,64;UBERON:0007284,2.69e-22,64;UBERON:0001017,3.33e-22,73;UBERON:0010371,3.20e-21,73;UBERON:0000955,8.14e-21,47;UBERON:0006238,8.14e-21,47;UBERON:0002616,3.40e-20,46;UBERON:0003056,7.99e-19,49;UBERON:0003080,3.63e-17,40;UBERON:0002020,1.07e-16,34;UBERON:0002780,1.82e-16,39;UBERON:0001890,1.82e-16,39;UBERON:0006240,1.82e-16,39;UBERON:0003528,2.49e-14,29;UBERON:0002791,2.49e-14,29;UBERON:0001893,2.49e-14,29;UBERON:0000956,6.28e-10,21;UBERON:0001869,6.28e-10,21;UBERON:0000203,6.28e-10,21;UBERON:0010314,1.23e-09,92;UBERON:0002619,1.87e-08,17;UBERON:0002021,2.84e-07,10;UBERON:0000411,2.84e-07,10;UBERON:0001950,2.84e-07,10;UBERON:0003076,6.27e-07,12;UBERON:0003057,6.27e-07,12
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93196309153,16.2655573701479,17.7128758947754,16.3088870891286,15.5037420259786,13.8910276776365,14.7949685748351,12.0407733312654,10.4988128366352,39.7657160375632,11.837551712368,16.4468200648377,18.8622679121091,18.4728628926845,21.6988503442588,18.7541299294764,17.8383002741546,15.754730566118,21.0767282295679,14.4950472495604,11.2331702440568,14.5365115488962,18.8534450219853,14.5849559174055,12.8621614748017,17.0075360884107,19.6694541233452,14.6638448414362,19.4950175870442,16.7604306913925,16.15584301086,15.829711066484,18.8093709827722,17.4143433368996,19.4015657621404,14.2840141677583,13.9851150625661,11.4833736460129,13.0950000763981,25.3078368182169,18.0175176433135,26.3738338944862,19.9362592543531,28.5896099300157,60.4284471600261,62.1439069284689,53.2792827498639,65.6479156552887,74.673994655,63.4530873807348,56.7018900194717,59.8927200288213,63.8930796667728,72.4864436452548,14.4264413142006,26.7346665178691,22.5368359595457,18.2330037801221,15.3017608718427,19.1197248788015,20.6689456855502,22.4578212390395,23.7480215097943,22.7427490587418,19.010947491768,21.5034029180127,20.6011316433741,21.0002499887971,23.3762358649346,28.1013277857013,17.9620705214526,18.1334667235883,16.4834360321323,22.0798380201596,17.4863318716562,22.1844757699172,20.5055123354696,20.2031519118937,17.3161259964208,19.1229013835189,18.8415812058956,17.6256706663355,16.9755142307327,16.2731258780744,21.3543032623513,19.1098695808593,24.1446315470117,18.43748410113,20.448100764001,32.225564553995,19.8841867178597,21.9168475129264,28.11938481412,19.6326363016369,18.5494268496337
|phase1_expression=30.9087274912252,12.9120900826564,15.4699741392442,20.8700305801713,20.5367249278002,19.3061162698673,19.1562365288331,35.8962839167582,12.3894075493467,11.7032263160997,19.5188483777076,23.2934704266382,23.9681021903688,34.531058955504,14.9899392817048,21.2599030759317,11.1929900500503,36.4358800988765,38.8033847104241,45.8340823941873,27.5540260089466,24.0284101906142,20.8959831311148,23.0389088822506,22.940928106717,15.5042630311055,18.0920038386811,17.0222273821852,18.0522248483555,18.146169342715,22.8382425974964,17.7808588568697,25.8327210785519,31.6963362030877,17.6199488048278,13.7974755647549,21.8461211200735,36.8307835048479,24.2213956802378,33.5055196143231,29.4115744015507,32.1031377930469,45.6379731849284,13.5968563413623,12.2666086775613,12.4811791469943,44.5963066278382,23.3286917327078,20.2111288115714,21.7761486963197,16.0984384869167,24.4379359420452,40.4356080599145,31.9159342484992,31.5928171193916,5.40244815675489,12.0344044774278,9.7977697532714,55.2323938146702,56.0730438028355,52.6080064910129,19.6529828600097,16.8966011261116,45.8948855813513,53.3987835786166,49.733608046227,33.2556122675429,46.4904149439081,31.0031940802348,34.021496459586,29.2351696278421,54.2736870367227,59.8553745978873,31.970098595103,32.3957692041639,31.2534387447407,92.4973400394865,71.7602840038755,71.8878575639219,52.8864013798077,50.8671298429398,53.1331637967895,82.3589847054074,59.0900740533264,66.772834278466,40.0694876244188,39.2945839005524,33.7382996943794,31.8807273932705,24.1828992341714,29.2763133588695,38.7190744641624,14.9593693415705,24.8263468153396,20.7928453583254,22.4013443548668,24.1564402626613,14.3161470965569,16.8860902991865,14.4869225549239,39.5770009572472,24.3820307087204,35.6727335589304,14.2213340630666,12.123498296628,12.4146334082798,14.1546844604139,21.9233049060595,39.3585583143701,18.1099409659086,15.6136794089522,16.1366703505435,16.8349312996923,18.6896074285252,18.5790157274414,16.5879900555172,23.7307169024999,16.4843266888699,16.8076004870476,16.6619855445831,16.7839554029899,15.5160081003271,13.0474232852686,60.0200633873672,61.5773318031558,19.1592791406444,13.4192939446631,19.196887391789,14.6130761134024,75.0451103418162,62.6775825861518,41.5915905493581,72.6585658403716,66.2303034485556,92.6734678735638,65.7077115424418,20.6733908616142,20.7759640918855,29.8212854951736,31.3558365270846,23.0313184043986,27.5882525320167,30.7906241967147,24.1127708537144,24.8333221902347,25.2384028961154,27.3609035714408,26.1290404446406,17.4610074275602,20.6125627382923,19.1786725338704,23.6731391021781,17.7950239504383,15.6713474934975,15.2278780941878,22.0928036168527,17.5553296828309,19.0437451264889,23.017243451043,23.1980865239762,19.2311369184499,16.2055855314913,17.7558551688908,14.9540816128027,15.1181770629631,15.8123082430277,15.8281306825775,15.880086561935,16.785104691175,14.2825693748813,17.3487252428131,16.2281986042119,14.9294078397914,14.4942932261202,69.395683026162,33.4439990232674,16.8513579321737,10.5780226665418,17.0630600428187,16.7210403739516,18.5569144303814,15.5296313959974,18.6797556829691,19.403013863481,15.6594590309689,15.481701744057,15.3314477368164,18.3039954277859,18.9115164505547,6.29173586057955,15.7780776408527,15.1347367673319,30.9158678553523,14.1668155636064,15.7790829942313,16.0884548997798,20.3650111526007,17.5339549725796,21.2474764737504,18.3036583494707,18.839847340965,17.3990001129739,17.4907049981418,15.5165948315967,15.9212786041694,13.7165888554761,17.2431103180227,12.7823894668781,11.4581633301639,15.5355914223438,14.4300351829781,12.9043864198398,8.62609239164127,12.6527922207291,23.0907878104775,21.2166257475574,17.0427542845817,21.7099584613515,27.5282253348241,18.1911755299665,17.6002174557388,13.2401166904647,21.3568125942537,21.2732946951106,19.9956658344252,25.172240573656,21.2807444543358,20.5962161373361,22.6425771493632,21.7938208571932,16.2323882953942,19.3829738499225,18.0949540727127,18.4927932498361,24.0964493779328,25.9380541526449,73.6927208043965,56.9648796838107,12.7869257393807,14.895784705058,14.5133780931478,10.5418460960092,17.4492952163567,16.4888470587261,20.2746793414979,22.9291989938954,16.1924280669958,16.9508397588561,13.4397844501818,60.4084074872997,25.9750355931132,21.0117412327361,18.8948872850148,25.2404288147979,31.8588332015911,16.5090832585387,16.3254720760966,16.2200368590072,20.0805287158925,27.0542930190656,17.3146956422708,18.1766864738753,22.1028374598527,27.495197940416,20.0295356292498,37.1287955693473,27.9160476718106,23.4079422240703,25.3543020214199,25.2917701337279,22.699549906211,24.6148968290857,23.0368628842969,29.8375650132307,20.4164386015428,30.2919861335263,26.9044645627054,37.7589519235989,16.1464426695906,14.8972924572545,16.7121281604391,17.8913580722117,15.1570035047522,67.4948099318255,22.2132145037208,20.432299928359,18.7046472643409,16.7647926734175,18.5904149700594,16.0144721244566,12.4084253895514,13.1554365184239,13.1289975114203,21.9574242143476,18.1893196309153,16.2655573701479,17.7128758947754,16.3088870891286,15.5037420259786,13.8910276776365,14.7949685748351,12.0407733312654,10.4988128366352,39.7657160375632,11.837551712368,16.4468200648377,18.8622679121091,18.4728628926845,21.6988503442588,18.7541299294764,17.8383002741546,15.754730566118,21.0767282295679,14.4950472495604,11.2331702440568,14.5365115488962,18.8534450219853,14.5849559174055,12.8621614748017,17.0075360884107,19.6694541233452,14.6638448414362,19.4950175870442,16.7604306913925,16.15584301086,15.829711066484,18.8093709827722,17.4143433368996,19.4015657621404,14.2840141677583,13.9851150625661,11.4833736460129,13.0950000763981,25.3078368182169,18.0175176433135,26.3738338944862,19.9362592543531,28.5896099300157,60.4284471600261,62.1439069284689,53.2792827498639,65.6479156552887,74.673994655,63.4530873807348,56.7018900194717,59.8927200288213,63.8930796667728,72.4864436452548,14.4264413142006,26.7346665178691,22.5368359595457,18.2330037801221,15.3017608718427,19.1197248788015,20.6689456855502,22.4578212390395,23.7480215097943,22.7427490587418,19.010947491768,21.5034029180127,20.6011316433741,21.0002499887971,23.3762358649346,28.1013277857013,17.9620705214526,18.1334667235883,16.4834360321323,22.0798380201596,17.4863318716562,22.1844757699172,20.5055123354696,20.2031519118937,17.3161259964208,19.1229013835189,18.8415812058956,17.6256706663355,16.9755142307327,16.2731258780744,21.3543032623513,19.1098695808593,24.1446315470117,18.43748410113,20.448100764001,32.225564553995,19.8841867178597,21.9168475129264,28.11938481412,19.6326363016369,18.5494268496337
|short_description=p1@B3gat3
|short_description=p1@B3gat3
}}
}}

Latest revision as of 04:51, 26 September 2015

Short description:p1@B3gat3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_B3gat3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000096243, NM_024256, uc008gnz.1, uc008goa.1, uc008gob.1_5end
EntrezGene:B3gat3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@B3gat3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G730.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E935.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.52
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.29
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A236.44
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A645.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.90
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.94
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I217.02
Ileum epithelium, pool1.CNhs13199.10252-104B918.05
Ileum epithelium, pool2.CNhs13232.10253-104C118.15
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G625.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G836.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H124.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H333.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G929.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H445.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B744.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.33
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.21
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C355.23
Mouse Granule cells, donor2.CNhs12357.11731-123E356.07
Mouse Granule cells, donor3.CNhs12108.11636-122C752.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.65
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C745.89
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E753.40
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D249.73
Mouse Microglia, donor1.CNhs12629.11718-123C833.26
Mouse Microglia, donor2.CNhs12634.11736-123E846.49
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F154.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D559.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D231.97
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D631.25
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D392.50
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F371.76
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D771.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D452.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E482.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E559.09
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I666.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.29
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.74
Mouse Schwann, donor1.CNhs12507.11728-123D931.88
Mouse Schwann, donor2.CNhs12573.11746-123F924.18
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F738.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C824.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.40
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.92
accessory axillary lymph node, adult.CNhs10475.1063-29H939.36
adrenal gland, adult.CNhs10508.49-24D718.11
adrenal gland, embryo E14.CNhs11038.406-44C515.61
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I116.83
adrenal gland, embryo E18.CNhs11026.1262-18F518.69
adrenal gland, neonate N00.CNhs11191.1311-23C118.58
adrenal gland, neonate N25.CNhs11223.1377-27I316.59
amnion, adult pregnant day17.5.CNhs10488.583-22A823.73
aorta, adult.CNhs10498.46-23H116.48
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F516.66
bone (os femoris), neonate N16.CNhs11225.1525-43A616.78
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B260.02
cerebellum, neonate N30.CNhs11135.1395-42I261.58
colon, adult.CNhs10468.36-18H719.16
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.61
corpora quadrigemina, adult.CNhs10501.16-22A475.05
corpus striatum, adult.CNhs10487.19-21D862.68
corpus striatum, neonate N00.CNhs11226.630-43F141.59
cortex, adult.CNhs10473.12-14D572.66
cortex, neonate N30.CNhs11107.1392-42F266.23
diencephalon, adult.CNhs10482.20-12F292.67
diencephalon, neonate N30.CNhs11201.1388-42B265.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.78
epididymis, adult.CNhs10490.58-23B229.82
eyeball, adult.CNhs10484.31-12G431.36
eyeball, embryo E12.CNhs11016.345-16C623.03
eyeball, embryo E14.CNhs10521.399-16E227.59
eyeball, embryo E15.CNhs10593.426-16C930.79
eyeball, embryo E17.CNhs11023.1261-18D424.11
eyeball, neonate N00.CNhs11207.633-15C624.83
eyeball, neonate N01.CNhs11140.1532-43E725.24
eyeball, neonate N02.CNhs11205.1551-44G827.36
eyeball, neonate N16.CNhs11188.777-19A226.13
forelimb, embryo E11.CNhs10596.335-25E217.46
forelimb, embryo E12.CNhs10600.359-14H220.61
forelimb, embryo E13.CNhs10589.384-1E219.18
forelimb, embryo E14.CNhs10577.413-26A823.67
forelimb, embryo E15.CNhs11007.437-20E717.80
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B515.23
gonad, embryo E13.CNhs11044.1564-45I622.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.02
heart, embryo E11.CNhs10586.331-24E923.20
heart, embryo E12.CNhs11015.353-12F519.23
heart, embryo E13.CNhs11013.376-3I916.21
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C814.95
heart, embryo E16.CNhs11021.457-17C615.12
heart, embryo E17.CNhs11025.479-18E515.81
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E315.88
heart, neonate N03.CNhs11221.1349-25I216.79
heart, neonate N10.CNhs11118.749-24G114.28
heart, neonate N16.CNhs11209.782-15G117.35
heart, neonate N20.CNhs11127.821-26I616.23
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D214.49
hippocampus, adult.CNhs10478.13-16E869.40
hippocampus, neonate N00.CNhs11228.627-43G133.44
intestinal mucosa, adult.CNhs10506.860-29I316.85
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I517.06
intestine, embryo E13.CNhs11010.381-16D516.72
intestine, embryo E15.CNhs10602.976-16D818.56
intestine, embryo E16.CNhs10585.463-22H415.53
intestine, embryo E17.CNhs10582.482-18D318.68
intestine, embryo E18.CNhs10526.1289-20F719.40
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E915.48
intestine, neonate N06.CNhs11102.688-20B815.33
intestine, neonate N07.CNhs11095.720-20F218.30
intestine, neonate N10.CNhs11098.755-23A518.91
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E315.78
intestine, neonate N30.CNhs11131.1384-42G115.13
kidney, embryo E14.CNhs10606.411-4I930.92
kidney, embryo E15.CNhs10997.434-16F814.17
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I216.09
kidney, embryo E18.CNhs11001.1288-20C720.37
kidney, neonate N00.CNhs11214.646-21G717.53
kidney, neonate N10.CNhs11206.758-6D521.25
kidney, neonate N20.CNhs11113.832-19I118.30
kidney, neonate N25.CNhs11122.1353-25F318.84
kidney, neonate N30.CNhs11203.1385-42H117.40
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F815.52
liver, embryo E13.CNhs10524.378-3H615.92
liver, embryo E14.CNhs10594.409-16E113.72
liver, embryo E15.CNhs10520.433-16D717.24
liver, embryo E16.CNhs10523.462-17F512.78
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G415.54
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G212.90
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B923.09
liver, neonate N20.CNhs11220.823-25A321.22
liver, neonate N25.CNhs11198.1368-26H117.04
liver, neonate N30.CNhs11106.1382-42D121.71
lung, adult.CNhs10474.28-22B127.53
lung, embryo E12.CNhs10522.354-16G218.19
lung, embryo E14.CNhs10604.404-26F817.60
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B621.36
lung, embryo E17.CNhs10605.480-44A621.27
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C625.17
lung, neonate N06.CNhs11212.683-20E521.28
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E622.64
lung, neonate N20.CNhs11109.822-18A421.79
lung, neonate N25.CNhs11119.1359-25C716.23
lung, neonate N30.CNhs11133.1394-42H219.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A118.49
mammary gland, adult lactating day02.CNhs10480.595-22B624.10
mammary gland, adult pregnant day19.CNhs10476.588-5H225.94
medulla oblongata, adult.CNhs10477.17-12C273.69
medulla oblongata, neonate N30.CNhs11200.1396-42A356.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.19
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I960.41
ovary, adult.CNhs10507.91-2I725.98
ovary, embryo E18.CNhs11040.505-44H721.01
ovary, neonate N00.CNhs11217.1299-22I418.89
oviduct, adult pregnant day01.CNhs10500.988-6G625.24
pancreas, adult.CNhs10486.34-16E431.86
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G320.08
pancreas, embryo E18.CNhs10580.1535-43I727.05
pancreas, neonate N00.CNhs11105.645-26G917.31
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D822.10
pancreas, neonate N16.CNhs11136.787-43B627.50
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G827.92
pituitary gland, embryo E12.CNhs11018.346-16E623.41
pituitary gland, embryo E13.CNhs11009.370-44C725.35
pituitary gland, embryo E14.CNhs11037.398-44A525.29
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F523.04
pituitary gland, neonate N00.CNhs11190.1308-22E929.84
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G330.29
prostate, adult.CNhs10470.859-1F826.90
skin, adult.CNhs10492.30-1C337.76
skin, neonate N00.CNhs11124.650-25G416.15
skin, neonate N03.CNhs11215.662-22H314.90
skin, neonate N06.CNhs11097.693-20I516.71
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C967.49
spleen, adult.CNhs10465.25-2G222.21
spleen, embryo E16.CNhs11035.461-43C120.43
spleen, embryo E18.CNhs11011.1271-21F218.70
spleen, neonate N10.CNhs11116.752-24D116.76
spleen, neonate N20.CNhs11112.824-19H118.59
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.13
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E318.19
stomach, embryo E15.CNhs10603.1252-16G816.27
stomach, embryo E16.CNhs11022.459-17D417.71
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C615.50
stomach, neonate N03.CNhs11193.1340-24B813.89
stomach, neonate N07.CNhs11210.718-18A914.79
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I110.50
submandibular gland, adult.CNhs10469.59-29C139.77
testis, adult.CNhs10504.57-7G511.84
testis, embryo E13.CNhs11031.389-23F516.45
testis, embryo E15.CNhs11034.443-27C518.86
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I521.70
testis, embryo E18.CNhs11027.503-18G518.75
testis, neonate N00.CNhs11189.1300-22B717.84
testis, neonate N07.CNhs11222.726-26I415.75
testis, neonate N10.CNhs11204.763-44D921.08
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I418.85
thymus, embryo E15.CNhs11005.430-45I214.58
thymus, embryo E16.CNhs11002.456-26C512.86
thymus, embryo E17.CNhs10581.478-18C117.01
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F814.66
thymus, neonate N03.CNhs11137.2104-43C719.50
thymus, neonate N06.CNhs11197.681-26C416.76
thymus, neonate N07.CNhs11211.713-19D316.16
thymus, neonate N10.CNhs11194.748-24E415.83
thymus, neonate N20.CNhs11186.820-7A218.81
thymus, neonate N25.CNhs11125.1362-25G717.41
thymus, neonate N30.CNhs11132.1393-42G219.40
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.48
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.10
urinary bladder, adult.CNhs10481.879-12E425.31
uterus, adult pregnant day19.CNhs10497.590-15F518.02
uterus, adult.CNhs10509.92-27E526.37
vagina, adult.CNhs10502.89-27D519.94
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A160.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A262.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D765.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A474.67
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A563.45
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A759.89
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A972.49
whole body, embryo E11.CNhs11014.324-5I814.43
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H222.54
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F219.12
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.08
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.35
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.44
whole body, embryo E17.5.CNhs10513.490-9F920.45
whole body, embryo E17.CNhs10517.475-3I532.23
whole body, embryo E18.CNhs10516.493-3B319.88
whole body, neonate N00.CNhs10525.657-19C221.92
whole body, neonate N01.CNhs10576.659-23C628.12
whole body, neonate N06.CNhs10515.692-21D119.63
whole body, neonate N10.CNhs10518.761-6B418.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.98e-1223
neuroblast (sensu Vertebrata)4.98e-1223
ectodermal cell3.04e-0844
neurectodermal cell3.04e-0844
neural cell7.15e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.90e-2554
ectoderm-derived structure7.95e-2495
ectoderm7.95e-2495
presumptive ectoderm7.95e-2495
neural tube1.89e-2352
neural rod1.89e-2352
future spinal cord1.89e-2352
neural keel1.89e-2352
nervous system9.05e-2375
neurectoderm2.69e-2264
neural plate2.69e-2264
presumptive neural plate2.69e-2264
central nervous system3.33e-2273
ecto-epithelium3.20e-2173
brain8.14e-2147
future brain8.14e-2147
regional part of brain3.40e-2046
pre-chordal neural plate7.99e-1949
anterior neural tube3.63e-1740
gray matter1.07e-1634
regional part of forebrain1.82e-1639
forebrain1.82e-1639
future forebrain1.82e-1639
brain grey matter2.49e-1429
regional part of telencephalon2.49e-1429
telencephalon2.49e-1429
cerebral cortex6.28e-1021
cerebral hemisphere6.28e-1021
pallium6.28e-1021
structure with developmental contribution from neural crest1.23e-0992
regional part of cerebral cortex1.87e-0817
occipital lobe2.84e-0710
visual cortex2.84e-0710
neocortex2.84e-0710
posterior neural tube6.27e-0712
chordal neural plate6.27e-0712
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