Personal tools

FFCP PHASE1:Mm9::chr5:72091157..72091188,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14400
|EntrezGene=14400
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P50571
|UniProt=P50571
|association_with_transcript=0bp_to_ENSMUST00000031122_5end
|association_with_transcript=0bp_to_ENSMUST00000031122_5end
|cluster_id=chr5:72091157..72091188,+
|description=CAGE_peak_1_at_Gabrb1_5end
|description=CAGE_peak_1_at_Gabrb1_5end
|id=chr5:72091157..72091188,+
|id=chr5:72091157..72091188,+
|ontology_enrichment_celltype=CL:0000117!3.49e-11!23;CL:0000337!3.49e-11!23;CL:0000221!1.76e-09!44;CL:0000133!1.76e-09!44;CL:0002319!1.97e-09!43;CL:0000540!1.02e-07!33;CL:0000047!1.02e-07!33;CL:0000031!1.02e-07!33;CL:0000404!1.02e-07!33;CL:0000055!7.00e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0002319,4.57e-09,43;CL:0000221,1.09e-08,44;CL:0000133,1.09e-08,44;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.94e-27!73;UBERON:0005743!3.94e-27!73;UBERON:0000073!7.47e-27!75;UBERON:0001016!7.47e-27!75;UBERON:0001049!2.46e-25!52;UBERON:0005068!2.46e-25!52;UBERON:0006241!2.46e-25!52;UBERON:0007135!2.46e-25!52;UBERON:0000033!8.80e-25!63;UBERON:0000955!2.48e-24!50;UBERON:0006238!2.48e-24!50;UBERON:0002616!1.37e-23!49;UBERON:0002346!6.70e-22!71;UBERON:0003075!6.70e-22!71;UBERON:0007284!6.70e-22!71;UBERON:0004121!3.82e-21!102;UBERON:0000924!3.82e-21!102;UBERON:0006601!3.82e-21!102;UBERON:0003056!6.55e-20!49;UBERON:0002020!7.65e-20!34;UBERON:0003080!4.85e-19!40;UBERON:0002780!2.57e-18!39;UBERON:0001890!2.57e-18!39;UBERON:0006240!2.57e-18!39;UBERON:0002791!1.06e-16!29;UBERON:0003528!1.06e-16!29;UBERON:0001893!1.06e-16!29;UBERON:0007811!6.06e-12!86;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0000153!8.49e-11!94;UBERON:0002619!1.73e-10!17;UBERON:0002021!3.78e-09!10;UBERON:0000411!3.78e-09!10;UBERON:0001950!3.78e-09!10;UBERON:0000025!6.36e-07!114;UBERON:0003076!7.45e-07!12;UBERON:0003057!7.45e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.46e-34,54;UBERON:0001017,1.24e-32,73;UBERON:0001049,9.98e-32,52;UBERON:0005068,9.98e-32,52;UBERON:0006241,9.98e-32,52;UBERON:0007135,9.98e-32,52;UBERON:0001016,2.94e-31,75;UBERON:0002346,1.05e-28,64;UBERON:0003075,1.05e-28,64;UBERON:0007284,1.05e-28,64;UBERON:0000955,3.81e-27,47;UBERON:0006238,3.81e-27,47;UBERON:0002616,3.88e-26,46;UBERON:0004121,1.40e-24,95;UBERON:0000924,1.40e-24,95;UBERON:0006601,1.40e-24,95;UBERON:0002020,1.72e-24,34;UBERON:0010371,3.67e-24,73;UBERON:0003080,1.70e-22,40;UBERON:0002780,1.68e-21,39;UBERON:0001890,1.68e-21,39;UBERON:0006240,1.68e-21,39;UBERON:0003056,1.27e-20,49;UBERON:0003528,4.72e-20,29;UBERON:0002791,4.72e-20,29;UBERON:0001893,4.72e-20,29;UBERON:0010314,8.69e-16,92;UBERON:0002619,1.82e-13,17;UBERON:0000956,7.06e-13,21;UBERON:0001869,7.06e-13,21;UBERON:0000203,7.06e-13,21;UBERON:0002021,1.75e-12,10;UBERON:0000411,1.75e-12,10;UBERON:0001950,1.75e-12,10;UBERON:0003076,1.49e-09,12;UBERON:0003057,1.49e-09,12;UBERON:0000025,6.54e-09,114;UBERON:0002420,1.41e-08,8;UBERON:0007245,1.41e-08,8;UBERON:0010009,1.41e-08,8;UBERON:0010011,1.41e-08,8;UBERON:0000454,1.41e-08,8;UBERON:0004111,6.36e-08,122
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.85592037554813,7.58276606389705,1.1198913730029,4.31257693094915,0,0,0,0,0,0.515672092277442,4.65327859977075,7.40587370980846,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0.829516898467821,0.540023753326763,1.68259969081106,8.85518051651791,7.50953039235486,1.34739879136449,0.862609239164127,0,28.6301290598411,34.8586432972562,38.7088463805734,5.93488294785872,8.78281378583133,10.4182674111352,16.7509799400829,36.0168070420275,44.3114918552749,23.8649154233671,25.4845308630394,7.26957838718672,0.151452386666368,0.0755715601067855,0,0,0,1.07940638327563,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,14.0534782565543,14.4518227701284,0.255457055208591,0,0,0,34.7514283419189,38.8875512395833,6.91098936620754,39.631945003839,28.8958466783273,37.1940599761613,34.2329065072969,2.64782346010822,2.48813941220186,11.3725241295154,1.26265113531884,0.390361328888111,0.689706313300419,0,0.60281927134286,0.816437989815934,1.2811372028485,1.40552586839593,3.62184719034622,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,53.6239368838525,11.5253165864799,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,22.6376331882787,23.090702258664,0,0,0,0,1.72338718186239,0,0,0,0,0.584511715822624,0.395287777946524,29.2402397943844,0.141940085208269,0.712262414669021,0.977321756121456,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0,0.712994756769443,0.316036757935816,0,0,46.2997863825152,0,0,0.214337035031592,0.709360934569094,3.0322698992352,4.44282355625727,2.74018454203139,0,0,0,0,0.161464426695906,0,0,0,0,21.1384844291981,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0.598066184175915,0,0.972255941720238,0.129159823477731,0.506868376472335,0.821500670520278,1.0416350787516,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,41.7916363536629,41.8895965221531,39.5297904273184,31.6209855512385,43.8452812653211,44.5682399459923,52.6517550180809,48.6346899482158,42.5953864445152,45.0451471224083,0,0.399024873401031,0.682934423016537,1.94485373654635,0.838452650511929,0.919217542250071,2.889207461421,3.09052585858341,1.92551525755089,3.53776096469316,2.28131369901216,2.82939512079114,2.52832070168682,3.52138338226781,3.10151532360312,2.38146845641537,3.01299247456624,2.31491064556446,4.53294490883637,2.79677948255355,0.342869252385415,1.77475806159337,3.57654284920981,2.47088908274958,3.29382831453657,1.26921911837515,2.74391959309159,2.36762740294059,2.58027816307137,2.24456908663095,2.72860541685601,1.97008964751127,1.63692417267876,3.71848418846318,1.35034627686799,2.74791635731741,3.27504251823572,1.50409737833809,1.3390183244819,0.882365676478062,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.85592037554813,7.58276606389705,1.1198913730029,4.31257693094915,0,0,0,0,0,0.515672092277442,4.65327859977075,7.40587370980846,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0.829516898467821,0.540023753326763,1.68259969081106,8.85518051651791,7.50953039235486,1.34739879136449,0.862609239164127,0,28.6301290598411,34.8586432972562,38.7088463805734,5.93488294785872,8.78281378583133,10.4182674111352,16.7509799400829,36.0168070420275,44.3114918552749,23.8649154233671,25.4845308630394,7.26957838718672,0.151452386666368,0.0755715601067855,0,0,0,1.07940638327563,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,14.0534782565543,14.4518227701284,0.255457055208591,0,0,0,34.7514283419189,38.8875512395833,6.91098936620754,39.631945003839,28.8958466783273,37.1940599761613,34.2329065072969,2.64782346010822,2.48813941220186,11.3725241295154,1.26265113531884,0.390361328888111,0.689706313300419,0,0.60281927134286,0.816437989815934,1.2811372028485,1.40552586839593,3.62184719034622,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,53.6239368838525,11.5253165864799,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,22.6376331882787,23.090702258664,0,0,0,0,1.72338718186239,0,0,0,0,0.584511715822624,0.395287777946524,29.2402397943844,0.141940085208269,0.712262414669021,0.977321756121456,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0,0.712994756769443,0.316036757935816,0,0,46.2997863825152,0,0,0.214337035031592,0.709360934569094,3.0322698992352,4.44282355625727,2.74018454203139,0,0,0,0,0.161464426695906,0,0,0,0,21.1384844291981,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0.598066184175915,0,0.972255941720238,0.129159823477731,0.506868376472335,0.821500670520278,1.0416350787516,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,41.7916363536629,41.8895965221531,39.5297904273184,31.6209855512385,43.8452812653211,44.5682399459923,52.6517550180809,48.6346899482158,42.5953864445152,45.0451471224083,0,0.399024873401031,0.682934423016537,1.94485373654635,0.838452650511929,0.919217542250071,2.889207461421,3.09052585858341,1.92551525755089,3.53776096469316,2.28131369901216,2.82939512079114,2.52832070168682,3.52138338226781,3.10151532360312,2.38146845641537,3.01299247456624,2.31491064556446,4.53294490883637,2.79677948255355,0.342869252385415,1.77475806159337,3.57654284920981,2.47088908274958,3.29382831453657,1.26921911837515,2.74391959309159,2.36762740294059,2.58027816307137,2.24456908663095,2.72860541685601,1.97008964751127,1.63692417267876,3.71848418846318,1.35034627686799,2.74791635731741,3.27504251823572,1.50409737833809,1.3390183244819,0.882365676478062,0.463735671240843
|short_description=p1@Gabrb1
|short_description=p1@Gabrb1
}}
}}

Latest revision as of 04:43, 26 September 2015

Short description:p1@Gabrb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gabrb1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000031122_5end
EntrezGene:Gabrb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gabrb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I644.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.75
corpus striatum, adult.CNhs10487.19-21D838.89
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D539.63
cortex, neonate N30.CNhs11107.1392-42F228.90
diencephalon, adult.CNhs10482.20-12F237.19
diencephalon, neonate N30.CNhs11201.1388-42B234.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E853.62
hippocampus, neonate N00.CNhs11228.627-43G111.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C222.64
medulla oblongata, neonate N30.CNhs11200.1396-42A323.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G846.30
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C921.14
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A339.53
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A544.57
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A652.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A748.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.60
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.05
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.65e-1223
neuroblast (sensu Vertebrata)1.65e-1223
neural cell4.57e-0943
ectodermal cell1.09e-0844
neurectodermal cell1.09e-0844
neuron1.56e-0833
neuronal stem cell1.56e-0833
neuroblast1.56e-0833
electrically signaling cell1.56e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.46e-3454
central nervous system1.24e-3273
neural tube9.98e-3252
neural rod9.98e-3252
future spinal cord9.98e-3252
neural keel9.98e-3252
nervous system2.94e-3175
neurectoderm1.05e-2864
neural plate1.05e-2864
presumptive neural plate1.05e-2864
brain3.81e-2747
future brain3.81e-2747
regional part of brain3.88e-2646
ectoderm-derived structure1.40e-2495
ectoderm1.40e-2495
presumptive ectoderm1.40e-2495
gray matter1.72e-2434
ecto-epithelium3.67e-2473
anterior neural tube1.70e-2240
regional part of forebrain1.68e-2139
forebrain1.68e-2139
future forebrain1.68e-2139
pre-chordal neural plate1.27e-2049
brain grey matter4.72e-2029
regional part of telencephalon4.72e-2029
telencephalon4.72e-2029
structure with developmental contribution from neural crest8.69e-1692
regional part of cerebral cortex1.82e-1317
cerebral cortex7.06e-1321
cerebral hemisphere7.06e-1321
pallium7.06e-1321
occipital lobe1.75e-1210
visual cortex1.75e-1210
neocortex1.75e-1210
posterior neural tube1.49e-0912
chordal neural plate1.49e-0912
tube6.54e-09114
basal ganglion1.41e-088
nuclear complex of neuraxis1.41e-088
aggregate regional part of brain1.41e-088
collection of basal ganglia1.41e-088
cerebral subcortex1.41e-088
anatomical conduit6.36e-08122
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:72091157..72091188,%2B&oldid=4233841"