FFCP PHASE1:Mm9::chr5:72091157..72091188,+: Difference between revisions
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{{FFCP|EntrezGene=14400|HGNC=|MCL_coexpression_id=1|UniProt=P50571|association_with_transcript=0bp_to_ENSMUST00000031122_5end|description=CAGE_peak_1_at_Gabrb1_5end|id=chr5:72091157..72091188,+|ontology_enrichment_celltype=CL:0000117!3.49e-11!23;CL:0000337!3.49e-11!23;CL:0000221!1.76e-09!44;CL:0000133!1.76e-09!44;CL:0002319!1.97e-09!43;CL:0000540!1.02e-07!33;CL:0000047!1.02e-07!33;CL:0000031!1.02e-07!33;CL:0000404!1.02e-07!33;CL:0000055!7.00e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0002319,4.57e-09,43;CL:0000221,1.09e-08,44;CL:0000133,1.09e-08,44;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.94e-27!73;UBERON:0005743!3.94e-27!73;UBERON:0000073!7.47e-27!75;UBERON:0001016!7.47e-27!75;UBERON:0001049!2.46e-25!52;UBERON:0005068!2.46e-25!52;UBERON:0006241!2.46e-25!52;UBERON:0007135!2.46e-25!52;UBERON:0000033!8.80e-25!63;UBERON:0000955!2.48e-24!50;UBERON:0006238!2.48e-24!50;UBERON:0002616!1.37e-23!49;UBERON:0002346!6.70e-22!71;UBERON:0003075!6.70e-22!71;UBERON:0007284!6.70e-22!71;UBERON:0004121!3.82e-21!102;UBERON:0000924!3.82e-21!102;UBERON:0006601!3.82e-21!102;UBERON:0003056!6.55e-20!49;UBERON:0002020!7.65e-20!34;UBERON:0003080!4.85e-19!40;UBERON:0002780!2.57e-18!39;UBERON:0001890!2.57e-18!39;UBERON:0006240!2.57e-18!39;UBERON:0002791!1.06e-16!29;UBERON:0003528!1.06e-16!29;UBERON:0001893!1.06e-16!29;UBERON:0007811!6.06e-12!86;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0000153!8.49e-11!94;UBERON:0002619!1.73e-10!17;UBERON:0002021!3.78e-09!10;UBERON:0000411!3.78e-09!10;UBERON:0001950!3.78e-09!10;UBERON:0000025!6.36e-07!114;UBERON:0003076!7.45e-07!12;UBERON:0003057!7.45e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.46e-34,54;UBERON:0001017,1.24e-32,73;UBERON:0001049,9.98e-32,52;UBERON:0005068,9.98e-32,52;UBERON:0006241,9.98e-32,52;UBERON:0007135,9.98e-32,52;UBERON:0001016,2.94e-31,75;UBERON:0002346,1.05e-28,64;UBERON:0003075,1.05e-28,64;UBERON:0007284,1.05e-28,64;UBERON:0000955,3.81e-27,47;UBERON:0006238,3.81e-27,47;UBERON:0002616,3.88e-26,46;UBERON:0004121,1.40e-24,95;UBERON:0000924,1.40e-24,95;UBERON:0006601,1.40e-24,95;UBERON:0002020,1.72e-24,34;UBERON:0010371,3.67e-24,73;UBERON:0003080,1.70e-22,40;UBERON:0002780,1.68e-21,39;UBERON:0001890,1.68e-21,39;UBERON:0006240,1.68e-21,39;UBERON:0003056,1.27e-20,49;UBERON:0003528,4.72e-20,29;UBERON:0002791,4.72e-20,29;UBERON:0001893,4.72e-20,29;UBERON:0010314,8.69e-16,92;UBERON:0002619,1.82e-13,17;UBERON:0000956,7.06e-13,21;UBERON:0001869,7.06e-13,21;UBERON:0000203,7.06e-13,21;UBERON:0002021,1.75e-12,10;UBERON:0000411,1.75e-12,10;UBERON:0001950,1.75e-12,10;UBERON:0003076,1.49e-09,12;UBERON:0003057,1.49e-09,12;UBERON:0000025,6.54e-09,114;UBERON:0002420,1.41e-08,8;UBERON:0007245,1.41e-08,8;UBERON:0010009,1.41e-08,8;UBERON:0010011,1.41e-08,8;UBERON:0000454,1.41e-08,8;UBERON:0004111,6.36e-08,122|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.85592037554813,7.58276606389705,1.1198913730029,4.31257693094915,0,0,0,0,0,0.515672092277442,4.65327859977075,7.40587370980846,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0.829516898467821,0.540023753326763,1.68259969081106,8.85518051651791,7.50953039235486,1.34739879136449,0.862609239164127,0,28.6301290598411,34.8586432972562,38.7088463805734,5.93488294785872,8.78281378583133,10.4182674111352,16.7509799400829,36.0168070420275,44.3114918552749,23.8649154233671,25.4845308630394,7.26957838718672,0.151452386666368,0.0755715601067855,0,0,0,1.07940638327563,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,14.0534782565543,14.4518227701284,0.255457055208591,0,0,0,34.7514283419189,38.8875512395833,6.91098936620754,39.631945003839,28.8958466783273,37.1940599761613,34.2329065072969,2.64782346010822,2.48813941220186,11.3725241295154,1.26265113531884,0.390361328888111,0.689706313300419,0,0.60281927134286,0.816437989815934,1.2811372028485,1.40552586839593,3.62184719034622,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,53.6239368838525,11.5253165864799,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,22.6376331882787,23.0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14400 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P50571 | |||
|association_with_transcript=0bp_to_ENSMUST00000031122_5end | |||
|cluster_id=chr5:72091157..72091188,+ | |||
|description=CAGE_peak_1_at_Gabrb1_5end | |||
|id=chr5:72091157..72091188,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.49e-11!23;CL:0000337!3.49e-11!23;CL:0000221!1.76e-09!44;CL:0000133!1.76e-09!44;CL:0002319!1.97e-09!43;CL:0000540!1.02e-07!33;CL:0000047!1.02e-07!33;CL:0000031!1.02e-07!33;CL:0000404!1.02e-07!33;CL:0000055!7.00e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-12,23;CL:0000337,1.65e-12,23;CL:0002319,4.57e-09,43;CL:0000221,1.09e-08,44;CL:0000133,1.09e-08,44;CL:0000540,1.56e-08,33;CL:0000047,1.56e-08,33;CL:0000031,1.56e-08,33;CL:0000404,1.56e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.94e-27!73;UBERON:0005743!3.94e-27!73;UBERON:0000073!7.47e-27!75;UBERON:0001016!7.47e-27!75;UBERON:0001049!2.46e-25!52;UBERON:0005068!2.46e-25!52;UBERON:0006241!2.46e-25!52;UBERON:0007135!2.46e-25!52;UBERON:0000033!8.80e-25!63;UBERON:0000955!2.48e-24!50;UBERON:0006238!2.48e-24!50;UBERON:0002616!1.37e-23!49;UBERON:0002346!6.70e-22!71;UBERON:0003075!6.70e-22!71;UBERON:0007284!6.70e-22!71;UBERON:0004121!3.82e-21!102;UBERON:0000924!3.82e-21!102;UBERON:0006601!3.82e-21!102;UBERON:0003056!6.55e-20!49;UBERON:0002020!7.65e-20!34;UBERON:0003080!4.85e-19!40;UBERON:0002780!2.57e-18!39;UBERON:0001890!2.57e-18!39;UBERON:0006240!2.57e-18!39;UBERON:0002791!1.06e-16!29;UBERON:0003528!1.06e-16!29;UBERON:0001893!1.06e-16!29;UBERON:0007811!6.06e-12!86;UBERON:0000956!1.45e-11!21;UBERON:0001869!1.45e-11!21;UBERON:0000203!1.45e-11!21;UBERON:0000153!8.49e-11!94;UBERON:0002619!1.73e-10!17;UBERON:0002021!3.78e-09!10;UBERON:0000411!3.78e-09!10;UBERON:0001950!3.78e-09!10;UBERON:0000025!6.36e-07!114;UBERON:0003076!7.45e-07!12;UBERON:0003057!7.45e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.46e-34,54;UBERON:0001017,1.24e-32,73;UBERON:0001049,9.98e-32,52;UBERON:0005068,9.98e-32,52;UBERON:0006241,9.98e-32,52;UBERON:0007135,9.98e-32,52;UBERON:0001016,2.94e-31,75;UBERON:0002346,1.05e-28,64;UBERON:0003075,1.05e-28,64;UBERON:0007284,1.05e-28,64;UBERON:0000955,3.81e-27,47;UBERON:0006238,3.81e-27,47;UBERON:0002616,3.88e-26,46;UBERON:0004121,1.40e-24,95;UBERON:0000924,1.40e-24,95;UBERON:0006601,1.40e-24,95;UBERON:0002020,1.72e-24,34;UBERON:0010371,3.67e-24,73;UBERON:0003080,1.70e-22,40;UBERON:0002780,1.68e-21,39;UBERON:0001890,1.68e-21,39;UBERON:0006240,1.68e-21,39;UBERON:0003056,1.27e-20,49;UBERON:0003528,4.72e-20,29;UBERON:0002791,4.72e-20,29;UBERON:0001893,4.72e-20,29;UBERON:0010314,8.69e-16,92;UBERON:0002619,1.82e-13,17;UBERON:0000956,7.06e-13,21;UBERON:0001869,7.06e-13,21;UBERON:0000203,7.06e-13,21;UBERON:0002021,1.75e-12,10;UBERON:0000411,1.75e-12,10;UBERON:0001950,1.75e-12,10;UBERON:0003076,1.49e-09,12;UBERON:0003057,1.49e-09,12;UBERON:0000025,6.54e-09,114;UBERON:0002420,1.41e-08,8;UBERON:0007245,1.41e-08,8;UBERON:0010009,1.41e-08,8;UBERON:0010011,1.41e-08,8;UBERON:0000454,1.41e-08,8;UBERON:0004111,6.36e-08,122 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79655344036982,2.85592037554813,7.58276606389705,1.1198913730029,4.31257693094915,0,0,0,0,0,0.515672092277442,4.65327859977075,7.40587370980846,2.53532561402472,0,0,0,0,0,0.898800331555214,0.768436610643109,0.829516898467821,0.540023753326763,1.68259969081106,8.85518051651791,7.50953039235486,1.34739879136449,0.862609239164127,0,28.6301290598411,34.8586432972562,38.7088463805734,5.93488294785872,8.78281378583133,10.4182674111352,16.7509799400829,36.0168070420275,44.3114918552749,23.8649154233671,25.4845308630394,7.26957838718672,0.151452386666368,0.0755715601067855,0,0,0,1.07940638327563,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,14.0534782565543,14.4518227701284,0.255457055208591,0,0,0,34.7514283419189,38.8875512395833,6.91098936620754,39.631945003839,28.8958466783273,37.1940599761613,34.2329065072969,2.64782346010822,2.48813941220186,11.3725241295154,1.26265113531884,0.390361328888111,0.689706313300419,0,0.60281927134286,0.816437989815934,1.2811372028485,1.40552586839593,3.62184719034622,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,53.6239368838525,11.5253165864799,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,22.6376331882787,23.090702258664,0,0,0,0,1.72338718186239,0,0,0,0,0.584511715822624,0.395287777946524,29.2402397943844,0.141940085208269,0.712262414669021,0.977321756121456,0.824850614862677,0,0,0,0,0,0.614870295887855,0,0,0.712994756769443,0.316036757935816,0,0,46.2997863825152,0,0,0.214337035031592,0.709360934569094,3.0322698992352,4.44282355625727,2.74018454203139,0,0,0,0,0.161464426695906,0,0,0,0,21.1384844291981,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0,0,0,0.598066184175915,0,0.972255941720238,0.129159823477731,0.506868376472335,0.821500670520278,1.0416350787516,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,41.7916363536629,41.8895965221531,39.5297904273184,31.6209855512385,43.8452812653211,44.5682399459923,52.6517550180809,48.6346899482158,42.5953864445152,45.0451471224083,0,0.399024873401031,0.682934423016537,1.94485373654635,0.838452650511929,0.919217542250071,2.889207461421,3.09052585858341,1.92551525755089,3.53776096469316,2.28131369901216,2.82939512079114,2.52832070168682,3.52138338226781,3.10151532360312,2.38146845641537,3.01299247456624,2.31491064556446,4.53294490883637,2.79677948255355,0.342869252385415,1.77475806159337,3.57654284920981,2.47088908274958,3.29382831453657,1.26921911837515,2.74391959309159,2.36762740294059,2.58027816307137,2.24456908663095,2.72860541685601,1.97008964751127,1.63692417267876,3.71848418846318,1.35034627686799,2.74791635731741,3.27504251823572,1.50409737833809,1.3390183244819,0.882365676478062,0.463735671240843 | |||
|short_description=p1@Gabrb1 | |||
}} |
Latest revision as of 04:43, 26 September 2015
Short description: | p1@Gabrb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabrb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000031122_5end |
EntrezGene: | Gabrb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.65e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-12 | 23 |
neural cell | 4.57e-09 | 43 |
ectodermal cell | 1.09e-08 | 44 |
neurectodermal cell | 1.09e-08 | 44 |
neuron | 1.56e-08 | 33 |
neuronal stem cell | 1.56e-08 | 33 |
neuroblast | 1.56e-08 | 33 |
electrically signaling cell | 1.56e-08 | 33 |