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FFCP PHASE1:Mm9::chr5:68238639..68238678,-: Difference between revisions

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(Created page with "{{FFCP |id=chr5:68238639..68238678,- |short_description=p1@Atp8a1 |description=CAGE_peak_1_at_Atp8a1_5end |association_with_transcript=0bp_to_ENSMUST00000037380,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr5:68238639..68238678,-
|DHSsupport=NA
|short_description=p1@Atp8a1
|DPIdataset=NA
|description=CAGE_peak_1_at_Atp8a1_5end
|association_with_transcript=0bp_to_ENSMUST00000037380,ENSMUST00000113651,ENSMUST00000113652,ENSMUST00000143013,NM_001038999,NM_009727,uc008xqa.1,uc008xqb.1,uc008xqc.1,uc008xqe.1_5end
|EntrezGene=11980
|EntrezGene=11980
|HGNC=
|HGNC=
|MCL_coexpression_id=3526
|TSSclassifier=NA
|UniProt=Q8BR88,E9Q4J5,Q3U9N5,P70704,A1L332
|UniProt=Q8BR88,E9Q4J5,Q3U9N5,P70704,A1L332
|association_with_transcript=0bp_to_ENSMUST00000037380,ENSMUST00000113651,ENSMUST00000113652,ENSMUST00000143013,NM_001038999,NM_009727,uc008xqa.1,uc008xqb.1,uc008xqc.1,uc008xqe.1_5end
|cluster_id=chr5:68238639..68238678,-
|description=CAGE_peak_1_at_Atp8a1_5end
|id=chr5:68238639..68238678,-
|ontology_enrichment_celltype=CL:0000540!2.56e-09!33;CL:0000047!2.56e-09!33;CL:0000031!2.56e-09!33;CL:0000404!2.56e-09!33;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,2.55e-09,33;CL:0000047,2.55e-09,33;CL:0000031,2.55e-09,33;CL:0000404,2.55e-09,33;CL:0000117,3.50e-08,23;CL:0000337,3.50e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.29e-14!73;UBERON:0005743!8.29e-14!73;UBERON:0000073!3.69e-13!75;UBERON:0001016!3.69e-13!75;UBERON:0001049!6.66e-11!52;UBERON:0005068!6.66e-11!52;UBERON:0006241!6.66e-11!52;UBERON:0007135!6.66e-11!52;UBERON:0002020!9.56e-11!34;UBERON:0000955!4.44e-10!50;UBERON:0006238!4.44e-10!50;UBERON:0002616!9.65e-10!49;UBERON:0002791!2.04e-08!29;UBERON:0003528!2.04e-08!29;UBERON:0001893!2.04e-08!29;UBERON:0003080!4.33e-08!40;UBERON:0002780!1.16e-07!39;UBERON:0001890!1.16e-07!39;UBERON:0006240!1.16e-07!39;UBERON:0000033!1.50e-07!63;UBERON:0004121!1.68e-07!102;UBERON:0000924!1.68e-07!102;UBERON:0006601!1.68e-07!102;UBERON:0002048!1.81e-07!14;UBERON:0000117!1.81e-07!14;UBERON:0000171!1.81e-07!14;UBERON:0000170!1.81e-07!14;UBERON:0005597!1.81e-07!14;UBERON:0000118!1.81e-07!14;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0007811!3.81e-07!86;UBERON:0002346!5.52e-07!71;UBERON:0003075!5.52e-07!71;UBERON:0007284!5.52e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-13,73;UBERON:0001016,4.67e-13,75;UBERON:0000073,7.03e-12,54;UBERON:0001049,8.53e-11,52;UBERON:0005068,8.53e-11,52;UBERON:0006241,8.53e-11,52;UBERON:0007135,8.53e-11,52;UBERON:0002020,1.02e-10,34;UBERON:0011216,3.45e-10,194;UBERON:0004121,4.38e-09,95;UBERON:0000924,4.38e-09,95;UBERON:0006601,4.38e-09,95;UBERON:0002346,6.36e-09,64;UBERON:0003075,6.36e-09,64;UBERON:0007284,6.36e-09,64;UBERON:0000955,1.89e-08,47;UBERON:0006238,1.89e-08,47;UBERON:0003528,2.17e-08,29;UBERON:0002791,2.17e-08,29;UBERON:0001893,2.17e-08,29;UBERON:0002616,3.95e-08,46;UBERON:0003080,4.57e-08,40;UBERON:0010371,8.87e-08,73;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39;UBERON:0002048,1.81e-07,14;UBERON:0000117,1.81e-07,14;UBERON:0000171,1.81e-07,14;UBERON:0000170,1.81e-07,14;UBERON:0005597,1.81e-07,14;UBERON:0000118,1.81e-07,14;UBERON:0002021,2.40e-07,10;UBERON:0000411,2.40e-07,10;UBERON:0001950,2.40e-07,10
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967055077,3.80554528051325,2.91676782516071,2.0665571756437,2.87225413334323,2.93393096614385,3.3853140059427,4.19437377702843,2.41584120826006,2.59227005632079,19.9087005995752,14.3934902856017,21.5693010046137,17.2794694560467,19.8719632190904,12.9142880607822,12.3801313005568,11.2244040652679,9.08698049533329,9.90688486514998,10.5867494393683,12.2796929732088,15.2976828208124,17.0640277185091,9.74940649545409,1.55390167361845,0.538283139656854,0.839423081820392,3.86379188064381,32.4690682530545,41.7585703329364,20.7937327706694,26.5833215138743,45.1801474093653,51.0961012522966,42.3942679945154,48.2907442385762,54.1215190618807,59.6761178937863,50.6266875173854,53.5882231836822,52.1113770331835,38.3142630696347,2.07574695168353,5.58634822761443,5.46347538413229,11.4260157022098,4.19226325255965,4.04455718590031,13.5570503958985,14.2164189494837,15.0832028508153,14.4037410705365,12.1670063947315,14.3356019453418,13.9525846130125,17.0306905396952,13.7270770803916,13.8125170472091,14.6014250690518,13.6965546529231,13.5988347265091,14.4254941731709,15.7719856097291,12.9557338496316,13.1139904471027,12.2090989971156,14.4928445839609,13.0306496153182,14.0854539112035,15.2580432633949,14.3952360676613,13.4674145197857,16.0157274467635,13.1996006383255,14.3230865109391,16.4233051657124,11.7673032698496,11.7410971630835,14.0358965067245,9.88406848622172,8.22539827896026,7.0589254118245,6.72416723299222
|phase1_expression=9.60893082628764,11.8651638597383,15.0149748998547,25.1045295384669,41.0734498556005,14.4376173844225,9.81173090501208,16.5277854005218,14.782815825925,10.7669682108117,2.91070545983358,3.43020283679947,14.8944635040149,15.7356724354195,19.6534759471241,15.9955461237963,10.4934281719222,20.3473096656063,25.3661702170617,22.9170411970936,31.0408009051405,6.25532992565577,5.74639536105658,3.03985603307473,2.2940928106717,14.9300310669905,12.0613358924541,7.97243560937789,2.09025761402011,6.30075324399827,3.76941868114018,10.7955214488137,15.9916844771988,0,9.24325183204079,3.49092755252834,5.51257261908397,29.7157457823205,18.7520482685712,24.0820922227947,35.2938892818609,31.4200923080885,29.1306211818692,0.251793635951155,0,0.550640256485045,0.782391344348039,0.872100625521786,0.659058548203415,2.13872888981712,2.09979632438044,2.87505128729943,15.7715649694272,18.859415692295,8.4023449785616,0.771778308107841,2.29226751951005,2.06268836910977,17.3992156339254,28.0365219014177,25.9870875437533,0.338844532069132,2.66788438833342,3.1496490104849,7.9109309005358,12.7886420690298,6.5912024314049,11.5265491596466,15.9682002955056,10.2604513132085,11.3575479129746,38.5628828945135,30.4798586513227,11.7591167246356,9.20116521775069,15.6267193723704,78.182275509566,43.7967569632194,51.1509755743291,17.672762555846,20.0357939489277,17.7110545989298,42.1566328492085,42.7699583624077,55.4657639429821,47.7298308467342,47.5521413869004,29.4511124403975,2.80186915332781,11.5624486963382,10.4351215932604,4.30211938490693,0.679971333707751,0,0,0,10.2524426696179,0,0,0,15.4927761754349,0,0,0,1.5154372870785,2.28023878927589,1.51657333504435,9.1347103775248,32.6261733395436,7.86743337043571,3.99016251562112,4.26251669636998,3.92046345335299,4.06951129492081,5.52666923537813,4.64966387919799,1.23597483867187,10.4111536982336,38.0382537338446,3.23533699894818,11.4837589599405,11.6370060752453,29.8226817948995,29.2780797011547,34.3492599174066,9.70736809792647,7.90779821739074,4.19931911695385,6.60765180779936,39.0953568846587,49.8675657072303,15.4554853098823,48.3231610134529,36.3115949409069,33.2460871295296,36.6665254533132,2.85150218780886,9.82815067819735,7.32895999457657,6.31325567659422,2.86264974517948,3.90833577536904,5.22180176435513,8.74087943447147,8.300452896462,10.6334387836425,10.6819965998091,10.0894314588216,2.37124792226126,1.51284864134255,2.11141348996739,3.06874025398605,5.00485048606076,7.66154766348766,10.0833246839892,9.55364480728767,2.1066395619397,4.63226232806487,7.10408748488982,2.89976081549703,3.51789089971644,1.44049649168812,3.07768156260773,3.93528463494808,3.23960937063494,3.95307706075693,3.75582761959467,3.97002164048376,3.29119699826961,5.58169377868924,6.72871119230603,9.35679919522127,8.56245449635098,9.5286557319864,40.5859600728766,12.2456488731348,10.9038198384653,15.3381328664856,4.90562976231038,5.80591679651096,7.86091514064769,11.4959609035305,12.6755484991576,11.6037631928661,11.3886974770683,8.23494773620054,10.304743560811,11.7384318504279,9.16331209459865,6.29173586057955,9.29393614461185,13.1433240347882,1.70701110857774,5.25543158004753,7.88954149711563,4.88763186828754,4.46090720485539,5.04977903210294,6.00747102680444,6.9376769550413,5.02395929092399,3.33172342588861,3.55743152504579,9.00963570866908,11.9900987019054,13.0420025183215,11.1573066763677,11.576503668116,12.4766667372896,13.8094145976389,6.48540907100142,5.21666685057355,2.87536413054709,7.07067800570156,5.61667811606209,2.77836765741823,2.87035861635059,2.41221760681684,67.8044207911439,4.73728529426212,14.5038829033403,21.8971160649993,36.6116787330063,64.3224028576573,64.9859139618817,57.5644261180507,38.1477048736982,39.1992500678332,42.5744232315491,56.8605702063611,61.130483580527,85.0536464459288,3.01582567878545,14.1415477792864,4.42587845717133,3.86311444826625,41.7431533968259,37.6249513960972,0,19.1877904675323,12.6203287766503,13.6653560503823,21.1114929778143,10.9925647058174,15.5959071857676,29.1568826712497,14.5731852602962,18.1198631905013,21.7408277870588,24.4204200480573,13.0584878391607,3.20518086601059,3.58351310577867,14.6823409445557,3.98235415019888,3.39892890616974,2.11626489875326,1.13163047853539,0.295301892880773,3.07435147943927,3.6179961043551,1.45413491791002,2.85197902707777,0.632073515871632,2.10837217149998,2.06271086496374,26.5542892487955,4.68158844481407,2.19909762430683,5.5727629108214,12.2364761213169,11.7723419617367,11.3538824215463,10.0473433207818,16.6616912725234,2.54198485036584,14.7754026696824,9.72828892354732,10.333723308538,9.40881628879231,9.07229814423837,8.042904087508,8.74442509889552,52.6607857709848,23.7510524309015,4.54051109519089,7.22258656741876,14.3160027323565,17.6335553760122,19.4461447225544,7.30907248973578,6.85762116385924,8.153798454461,1.90934123603023,3.95419991976419,3.45643094115643,3.88819226958485,3.13632444021703,6.98760203987768,4.45052343069908,3.88471241909079,10.2084817373772,37.7179572279117,4.97071450469541,0,8.67195967055077,3.80554528051325,2.91676782516071,2.0665571756437,2.87225413334323,2.93393096614385,3.3853140059427,4.19437377702843,2.41584120826006,2.59227005632079,19.9087005995752,14.3934902856017,21.5693010046137,17.2794694560467,19.8719632190904,12.9142880607822,12.3801313005568,11.2244040652679,9.08698049533329,9.90688486514998,10.5867494393683,12.2796929732088,15.2976828208124,17.0640277185091,9.74940649545409,1.55390167361845,0.538283139656854,0.839423081820392,3.86379188064381,32.4690682530545,41.7585703329364,20.7937327706694,26.5833215138743,45.1801474093653,51.0961012522966,42.3942679945154,48.2907442385762,54.1215190618807,59.6761178937863,50.6266875173854,53.5882231836822,52.1113770331835,38.3142630696347,2.07574695168353,5.58634822761443,5.46347538413229,11.4260157022098,4.19226325255965,4.04455718590031,13.5570503958985,14.2164189494837,15.0832028508153,14.4037410705365,12.1670063947315,14.3356019453418,13.9525846130125,17.0306905396952,13.7270770803916,13.8125170472091,14.6014250690518,13.6965546529231,13.5988347265091,14.4254941731709,15.7719856097291,12.9557338496316,13.1139904471027,12.2090989971156,14.4928445839609,13.0306496153182,14.0854539112035,15.2580432633949,14.3952360676613,13.4674145197857,16.0157274467635,13.1996006383255,14.3230865109391,16.4233051657124,11.7673032698496,11.7410971630835,14.0358965067245,9.88406848622172,8.22539827896026,7.0589254118245,6.72416723299222
|short_description=p1@Atp8a1
}}
}}

Latest revision as of 04:34, 26 September 2015

Short description:p1@Atp8a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atp8a1_5end
Coexpression cluster:MCL_coexpression_mm9:3526
Association with transcript: 0bp_to_ENSMUST00000037380, ENSMUST00000113651, ENSMUST00000113652, ENSMUST00000143013, NM_001038999, NM_009727, uc008xqa.1, uc008xqb.1, uc008xqc.1, uc008xqe.1_5end
EntrezGene:Atp8a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atp8a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G935.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.77
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C317.40
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.48
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D378.18
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I655.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E129.45
Mouse Schwann, donor1.CNhs12507.11728-123D92.80
Mouse Schwann, donor2.CNhs12573.11746-123F911.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H932.63
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I34.65
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H110.41
bone (os femoris), adult.CNhs10483.56-12G238.04
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A611.48
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I234.35
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.61
corpora quadrigemina, adult.CNhs10501.16-22A439.10
corpus striatum, adult.CNhs10487.19-21D849.87
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D548.32
cortex, neonate N30.CNhs11107.1392-42F236.31
diencephalon, adult.CNhs10482.20-12F233.25
diencephalon, neonate N30.CNhs11201.1388-42B236.67
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C68.30
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G810.68
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I69.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G16.73
heart, neonate N20.CNhs11127.821-26I69.36
heart, neonate N25.CNhs11196.1351-25D38.56
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E840.59
hippocampus, neonate N00.CNhs11228.627-43G112.25
intestinal mucosa, adult.CNhs10506.860-29I310.90
intestine, adult.CNhs10496.178-9A315.34
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H411.50
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F711.60
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E98.23
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F211.74
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F85.26
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D56.01
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F89.01
liver, embryo E13.CNhs10524.378-3H611.99
liver, embryo E14.CNhs10594.409-16E113.04
liver, embryo E15.CNhs10520.433-16D711.16
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B167.80
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F814.50
lung, embryo E15.CNhs11020.432-17C521.90
lung, embryo E16.CNhs10998.458-17B636.61
lung, embryo E17.CNhs10605.480-44A664.32
lung, embryo E18.CNhs10583.1287-20I664.99
lung, neonate N00.CNhs11224.640-42C657.56
lung, neonate N06.CNhs11212.683-20E538.15
lung, neonate N07.CNhs11111.715-19A339.20
lung, neonate N10.CNhs11219.750-23E642.57
lung, neonate N20.CNhs11109.822-18A456.86
lung, neonate N25.CNhs11119.1359-25C761.13
lung, neonate N30.CNhs11133.1394-42H285.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C241.74
medulla oblongata, neonate N30.CNhs11200.1396-42A337.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.16
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I713.06
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G826.55
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B912.24
pituitary gland, embryo E16.CNhs11036.449-43F611.77
pituitary gland, embryo E17.CNhs11039.1265-44F511.35
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F814.78
skin, adult.CNhs10492.30-1C39.73
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H39.41
skin, neonate N06.CNhs11097.693-20I59.07
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C952.66
spleen, adult.CNhs10465.25-2G223.75
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D114.32
spleen, neonate N20.CNhs11112.824-19H117.63
spleen, neonate N25.CNhs11099.1354-25G319.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I137.72
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B519.91
thymus, embryo E14.CNhs11041.402-44I414.39
thymus, embryo E15.CNhs11005.430-45I221.57
thymus, embryo E16.CNhs11002.456-26C517.28
thymus, embryo E17.CNhs10581.478-18C119.87
thymus, embryo E18.CNhs10595.1273-19G412.91
thymus, neonate N02.CNhs11181.1541-43F812.38
thymus, neonate N03.CNhs11137.2104-43C711.22
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D39.91
thymus, neonate N10.CNhs11194.748-24E410.59
thymus, neonate N20.CNhs11186.820-7A212.28
thymus, neonate N25.CNhs11125.1362-25G715.30
thymus, neonate N30.CNhs11132.1393-42G217.06
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F532.47
uterus, adult.CNhs10509.92-27E541.76
vagina, adult.CNhs10502.89-27D520.79
vesicular gland, adult.CNhs10491.51-27F826.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A251.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.39
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D748.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A559.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A650.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A753.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D211.43
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.95
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.60
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.42
whole body, embryo E17.5.CNhs10513.490-9F911.77
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.55e-0933
neuronal stem cell2.55e-0933
neuroblast2.55e-0933
electrically signaling cell2.55e-0933
CNS neuron (sensu Vertebrata)3.50e-0823
neuroblast (sensu Vertebrata)3.50e-0823

Uber anatomy
Ontology termp-valuen
central nervous system1.06e-1373
nervous system4.67e-1375
regional part of nervous system7.03e-1254
neural tube8.53e-1152
neural rod8.53e-1152
future spinal cord8.53e-1152
neural keel8.53e-1152
gray matter1.02e-1034
organ system subdivision3.45e-10194
ectoderm-derived structure4.38e-0995
ectoderm4.38e-0995
presumptive ectoderm4.38e-0995
neurectoderm6.36e-0964
neural plate6.36e-0964
presumptive neural plate6.36e-0964
brain1.89e-0847
future brain1.89e-0847
brain grey matter2.17e-0829
regional part of telencephalon2.17e-0829
telencephalon2.17e-0829
regional part of brain3.95e-0846
anterior neural tube4.57e-0840
ecto-epithelium8.87e-0873
regional part of forebrain1.22e-0739
forebrain1.22e-0739
future forebrain1.22e-0739
lung1.81e-0714
respiratory tube1.81e-0714
respiration organ1.81e-0714
pair of lungs1.81e-0714
lung primordium1.81e-0714
lung bud1.81e-0714
occipital lobe2.40e-0710
visual cortex2.40e-0710
neocortex2.40e-0710
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