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FFCP PHASE1:Mm9::chr9:108250158..108250257,+: Difference between revisions

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{{FFCP|EntrezGene=22258|HGNC=|MCL_coexpression_id=788|UniProt=P35123,G3X9H2,Q921M8|association_with_transcript=0bp_to_ENSMUST00000035237,ENSMUST00000076375,NM_011678,uc009rpg.2,uc009rph.2,uc009rpi.2_5end|description=CAGE_peak_1_at_Usp4_5end|id=chr9:108250158..108250257,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000064!5.69e-07!99|ontology_enrichment_uberon_v019_2=|phase1_expression=29.3072390201773,43.9709013625595,43.6799269813955,40.2277401038084,34.0609096363516,37.9407154520871,33.1729949645646,33.1846941244851,25.9051248759067,25.9811624217413,32.1889780263949,26.4843567864517,33.3841423365851,31.9084468829341,41.9718299887735,43.1272319540329,61.5614452752769,32.6503341145776,36.8837826399437,39.8926272690148,49.0699784171673,21.2482635569895,21.4183827093927,38.0781966248308,38.0819406571502,30.4342940980961,37.0455316696804,36.6301095566011,30.4037471130198,37.5524893342297,33.7030376196063,21.5910428976275,36.9038872550742,0,27.7297554961224,20.2806267337361,19.3960888449251,65.7094660256945,57.0374801502374,55.4935168612226,54.1172968988533,68.3045484958446,69.427980483455,16.1147927008739,20.3767631751224,21.1078764985934,13.3006528539167,27.2531445475558,27.9001452072779,29.3589147602168,25.0575694709399,21.5628846547457,39.5966950296258,31.9159342484992,23.8626597391149,23.9251275513431,22.9226751951005,25.7836046138721,41.4748744762175,42.3192783417626,38.6637156138769,28.8017852258762,19.5644855144451,12.1486461832989,10.8775299882367,6.3943210345149,5.99200221036809,15.3687322128622,40.6463280249232,39.1517221161903,36.8068682364919,29.9933533623994,27.8294361599033,35.3998409731217,48.2102719221729,40.4456266108409,15.4162233399144,31.0280231547006,22.2729473221553,42.7311572245828,51.599030991759,42.7148963856543,25.1264699101243,26.449842671489,26.4340968653881,28.8736013764194,32.7454865837937,34.6702969235059,40.6649658199198,31.7400552448499,22.3195656300292,27.5335640634044,29.918738683141,32.382191498269,33.1385972898311,31.3618820968135,31.1786612692489,18.2360445158522,16.3665182899807,18.3736578745377,29.0137444739962,30.7983545794363,66.2493623237279,56.8853362522665,26.4119070033681,19.2553497761075,21.2320266906209,30.487095884989,26.9295398993059,25.2351636410202,28.2781082628801,21.9215144384742,31.59432312408,25.0199583317353,27.868523591162,34.1813128416717,33.3713206441405,21.4007048241469,30.0767587662957,26.5297633913751,29.8136049921531,33.4563924663303,18.6391761218122,27.2286141220739,30.369772487951,26.3120766864849,16.8939325553348,23.3962065087429,20.9665874670557,26.3631525352488,35.2275464170342,52.3978648310645,31.2883776346098,36.0558794835766,22.648896856992,33.0972176658226,30.0426123358433,30.4797077994728,20.7232661915613,19.7815344533286,24.7228841629137,27.1284483231498,25.7488845621649,29.8395539314716,27.9630011511957,30.8754065886488,34.0137260151816,28.7160741520307,28.8861110530009,26.4748512234947,27.9762287420679,20.3852031157645,20.5754964426942,26.8154168222068,25.311202778177,26.6705917536781,26.6841011179029,19.5584409407184,23.3014069504386,28.7904823824348,18.0585066185444,21.6074473753218,25.8051761787879,22.2343581874566,27.4595460939533,26.5088697015465,29.2418007525585,31.0595810696671,35.0512480315713,29.7143109983162,30.887216436971,30.8481973467451,27.8828646419634,27.780728683397,27.5479832619007,40.3386080526795,34.0331346473312,24.3294521330461,28.7939138222566,29.4940573262757,23.8404803445873,27.0255922995279,21.5706702529524,22.6368495073945,32.2679761850268,24.0460473897056,22.8715040008245,24.2726895890204,28.2697926322724,26.0657628509724,28.3140845335849,31.46432117419,21.6221407086513,25.0204242615306,29.3040112750009,27.900231914808,26.5714907419647,29.6674518136047,29.7844089855252,31.4409615196553,30.3007544733853,29.6153193412321,41.799820419288,32.0342602974901,28.3044952963012,31.9304199586492,35.094801000211,33.7648023653384,26.9903402888305,26.1803485080238,26.7523124178808,32.3982467561936,35.9420516318386,31.6319805518228,34.9482193888308,42.938409251009,47.1815197562629,40.5252557945228,29.0062508561569,27.4762547067203,28.1929409244705,24.4432923516271,22.5302638356962,20.2682571504597,24.2804513703734,31.6116509529634,29.7930422360701,29.6762684129358,34.1233204927022,33.1003895725791,35.7457912462404,29.0744607748838,15.0791283939272,24.4757557718419,19.1788066477424,25.9380541526449,24.0825884981688,26.1382061100613,16.0656246469142,33.5786333181816,22.085575359138,24.2072021463916,23.4811503528751,21.5071918157297,22.7254647564042,22.0799694015289,25.5030742055183,22.7959569170823,29.6465833459893,29.2402397943844,22.1426532924899,30.6272838307679,33.7176005861903,22.7658769702099,17.2568679841952,16.9946445308487,27.8137672407571,19.2377181351016,17.4228116799656,15.9866276930842,29.9776820075137,28.7191646287229,22.1028374598527,18.0140952023415,16.8669773719998,12.3762651897824,18.0432991049508,26.6490419166339,30.5286493727301,29.3641737993281,30.8572006537556,24.9716344642899,24.8469021109203,33.1866794534913,20.6511103096065,29.0209937083434,28.2276349510351,28.1955492529931,31.3240987790057,33.7752379597673,34.8567244489158,30.5302073525814,37.3095470886209,22.8073121472927,34.5159179211662,29.1005483828144,27.0384009959779,33.7179538038397,35.9505818906296,38.8922894451089,22.267174329195,18.4735917067229,22.5265957301211,12.4107180341965,26.4140554640248,25.2116139237292,27.8653779320247,27.1814784818809,26.4218702132875,29.4004275118909,32.978728834409,35.598808109828,33.5702780825744,31.0669656543463,193.910370907361,27.2120113800041,34.5808245055334,31.8899948884238,28.2860013416231,22.6401208157643,29.104595184147,29.5563953595767,29.4654757836247,78.273255147626,114.923972496888,27.1769563740233,30.2060570782345,23.212676319251,23.2558273130253,22.5573636541027,25.8285761215644,37.1403939016704,27.7656311088205,28.9773711351184,31.2447907285499,32.4660316140626,30.9916060752413,32.5196024744314,30.3879945672079,39.677817132662,23.0865391509027,19.6473345974752,19.1388462655049,23.9555096599916,23.8356743823001,27.4727436400898,37.7288347179156,20.5644562654499,32.1908550291728,30.8417908459809,28.6447756719698,37.2921405685802,34.9392085083028,30.9711497929777,27.0009000092722,28.8205570063501,27.6416869480365,36.2432218226274,28.9566699759853,34.7151639858897,28.6832457666945,24.0675649897611,27.8785506295216,25.3704041661019,26.8918540639954,23.4879965252339,20.5388294138762,25.5224183881435,21.5457404906704,26.9735668182089,24.8149994795188,25.4179855047331,26.3628802506265,26.6724467118521,30.5934620494418,31.2512937151202,32.9668720642645,24.8766175027131,25.0294554241353,20.7646693206425,33.8579389725196,19.040380578835,30.1150017329058,26.2305284464197,24.5123483649515,25.5177620094708,26.6176063137889,23.567975409625,28.4724043498018,27.8767685122845,28.2369419787086,26.8040735251721,22.9558867067558,29.9772693525535,20.8199131516413,24.0655580534094,23.5284648444677,24.0444646840272,26.2010654251076|short_description=p1@Usp4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22258
|HGNC=
|MCL_coexpression_id=788
|TSSclassifier=NA
|UniProt=P35123,G3X9H2,Q921M8
|association_with_transcript=0bp_to_ENSMUST00000035237,ENSMUST00000076375,NM_011678,uc009rpg.2,uc009rph.2,uc009rpi.2_5end
|cluster_id=chr9:108250158..108250257,+
|description=CAGE_peak_1_at_Usp4_5end
|id=chr9:108250158..108250257,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!5.69e-07!99
|ontology_enrichment_uberon_v019_2=
|phase1_expression=29.3072390201773,43.9709013625595,43.6799269813955,40.2277401038084,34.0609096363516,37.9407154520871,33.1729949645646,33.1846941244851,25.9051248759067,25.9811624217413,32.1889780263949,26.4843567864517,33.3841423365851,31.9084468829341,41.9718299887735,43.1272319540329,61.5614452752769,32.6503341145776,36.8837826399437,39.8926272690148,49.0699784171673,21.2482635569895,21.4183827093927,38.0781966248308,38.0819406571502,30.4342940980961,37.0455316696804,36.6301095566011,30.4037471130198,37.5524893342297,33.7030376196063,21.5910428976275,36.9038872550742,0,27.7297554961224,20.2806267337361,19.3960888449251,65.7094660256945,57.0374801502374,55.4935168612226,54.1172968988533,68.3045484958446,69.427980483455,16.1147927008739,20.3767631751224,21.1078764985934,13.3006528539167,27.2531445475558,27.9001452072779,29.3589147602168,25.0575694709399,21.5628846547457,39.5966950296258,31.9159342484992,23.8626597391149,23.9251275513431,22.9226751951005,25.7836046138721,41.4748744762175,42.3192783417626,38.6637156138769,28.8017852258762,19.5644855144451,12.1486461832989,10.8775299882367,6.3943210345149,5.99200221036809,15.3687322128622,40.6463280249232,39.1517221161903,36.8068682364919,29.9933533623994,27.8294361599033,35.3998409731217,48.2102719221729,40.4456266108409,15.4162233399144,31.0280231547006,22.2729473221553,42.7311572245828,51.599030991759,42.7148963856543,25.1264699101243,26.449842671489,26.4340968653881,28.8736013764194,32.7454865837937,34.6702969235059,40.6649658199198,31.7400552448499,22.3195656300292,27.5335640634044,29.918738683141,32.382191498269,33.1385972898311,31.3618820968135,31.1786612692489,18.2360445158522,16.3665182899807,18.3736578745377,29.0137444739962,30.7983545794363,66.2493623237279,56.8853362522665,26.4119070033681,19.2553497761075,21.2320266906209,30.487095884989,26.9295398993059,25.2351636410202,28.2781082628801,21.9215144384742,31.59432312408,25.0199583317353,27.868523591162,34.1813128416717,33.3713206441405,21.4007048241469,30.0767587662957,26.5297633913751,29.8136049921531,33.4563924663303,18.6391761218122,27.2286141220739,30.369772487951,26.3120766864849,16.8939325553348,23.3962065087429,20.9665874670557,26.3631525352488,35.2275464170342,52.3978648310645,31.2883776346098,36.0558794835766,22.648896856992,33.0972176658226,30.0426123358433,30.4797077994728,20.7232661915613,19.7815344533286,24.7228841629137,27.1284483231498,25.7488845621649,29.8395539314716,27.9630011511957,30.8754065886488,34.0137260151816,28.7160741520307,28.8861110530009,26.4748512234947,27.9762287420679,20.3852031157645,20.5754964426942,26.8154168222068,25.311202778177,26.6705917536781,26.6841011179029,19.5584409407184,23.3014069504386,28.7904823824348,18.0585066185444,21.6074473753218,25.8051761787879,22.2343581874566,27.4595460939533,26.5088697015465,29.2418007525585,31.0595810696671,35.0512480315713,29.7143109983162,30.887216436971,30.8481973467451,27.8828646419634,27.780728683397,27.5479832619007,40.3386080526795,34.0331346473312,24.3294521330461,28.7939138222566,29.4940573262757,23.8404803445873,27.0255922995279,21.5706702529524,22.6368495073945,32.2679761850268,24.0460473897056,22.8715040008245,24.2726895890204,28.2697926322724,26.0657628509724,28.3140845335849,31.46432117419,21.6221407086513,25.0204242615306,29.3040112750009,27.900231914808,26.5714907419647,29.6674518136047,29.7844089855252,31.4409615196553,30.3007544733853,29.6153193412321,41.799820419288,32.0342602974901,28.3044952963012,31.9304199586492,35.094801000211,33.7648023653384,26.9903402888305,26.1803485080238,26.7523124178808,32.3982467561936,35.9420516318386,31.6319805518228,34.9482193888308,42.938409251009,47.1815197562629,40.5252557945228,29.0062508561569,27.4762547067203,28.1929409244705,24.4432923516271,22.5302638356962,20.2682571504597,24.2804513703734,31.6116509529634,29.7930422360701,29.6762684129358,34.1233204927022,33.1003895725791,35.7457912462404,29.0744607748838,15.0791283939272,24.4757557718419,19.1788066477424,25.9380541526449,24.0825884981688,26.1382061100613,16.0656246469142,33.5786333181816,22.085575359138,24.2072021463916,23.4811503528751,21.5071918157297,22.7254647564042,22.0799694015289,25.5030742055183,22.7959569170823,29.6465833459893,29.2402397943844,22.1426532924899,30.6272838307679,33.7176005861903,22.7658769702099,17.2568679841952,16.9946445308487,27.8137672407571,19.2377181351016,17.4228116799656,15.9866276930842,29.9776820075137,28.7191646287229,22.1028374598527,18.0140952023415,16.8669773719998,12.3762651897824,18.0432991049508,26.6490419166339,30.5286493727301,29.3641737993281,30.8572006537556,24.9716344642899,24.8469021109203,33.1866794534913,20.6511103096065,29.0209937083434,28.2276349510351,28.1955492529931,31.3240987790057,33.7752379597673,34.8567244489158,30.5302073525814,37.3095470886209,22.8073121472927,34.5159179211662,29.1005483828144,27.0384009959779,33.7179538038397,35.9505818906296,38.8922894451089,22.267174329195,18.4735917067229,22.5265957301211,12.4107180341965,26.4140554640248,25.2116139237292,27.8653779320247,27.1814784818809,26.4218702132875,29.4004275118909,32.978728834409,35.598808109828,33.5702780825744,31.0669656543463,193.910370907361,27.2120113800041,34.5808245055334,31.8899948884238,28.2860013416231,22.6401208157643,29.104595184147,29.5563953595767,29.4654757836247,78.273255147626,114.923972496888,27.1769563740233,30.2060570782345,23.212676319251,23.2558273130253,22.5573636541027,25.8285761215644,37.1403939016704,27.7656311088205,28.9773711351184,31.2447907285499,32.4660316140626,30.9916060752413,32.5196024744314,30.3879945672079,39.677817132662,23.0865391509027,19.6473345974752,19.1388462655049,23.9555096599916,23.8356743823001,27.4727436400898,37.7288347179156,20.5644562654499,32.1908550291728,30.8417908459809,28.6447756719698,37.2921405685802,34.9392085083028,30.9711497929777,27.0009000092722,28.8205570063501,27.6416869480365,36.2432218226274,28.9566699759853,34.7151639858897,28.6832457666945,24.0675649897611,27.8785506295216,25.3704041661019,26.8918540639954,23.4879965252339,20.5388294138762,25.5224183881435,21.5457404906704,26.9735668182089,24.8149994795188,25.4179855047331,26.3628802506265,26.6724467118521,30.5934620494418,31.2512937151202,32.9668720642645,24.8766175027131,25.0294554241353,20.7646693206425,33.8579389725196,19.040380578835,30.1150017329058,26.2305284464197,24.5123483649515,25.5177620094708,26.6176063137889,23.567975409625,28.4724043498018,27.8767685122845,28.2369419787086,26.8040735251721,22.9558867067558,29.9772693525535,20.8199131516413,24.0655580534094,23.5284648444677,24.0444646840272,26.2010654251076
|short_description=p1@Usp4
}}

Latest revision as of 04:17, 26 September 2015

Short description:p1@Usp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usp4_5end
Coexpression cluster:MCL_coexpression_mm9:788
Association with transcript: 0bp_to_ENSMUST00000035237, ENSMUST00000076375, NM_011678, uc009rpg.2, uc009rph.2, uc009rpi.2_5end
EntrezGene:Usp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Usp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I543.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I643.68
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I434.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I737.94
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I833.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.38
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E831.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A141.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A343.13
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A561.56
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.65
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A436.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A639.89
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A349.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D138.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D238.08
GP2+ M cell, pool1.CNhs13228.11845-124H930.43
GP2+ M cell, pool2.CNhs13231.11846-124I137.05
GP2+ M cell, pool3.CNhs13240.11847-124I236.63
Ileum epithelium, pool1.CNhs13199.10252-104B930.40
Ileum epithelium, pool2.CNhs13232.10253-104C137.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C833.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F527.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H157.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H355.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G954.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H268.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H469.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C227.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.90
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A239.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.86
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.93
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C341.47
Mouse Granule cells, donor2.CNhs12357.11731-123E342.32
Mouse Granule cells, donor3.CNhs12108.11636-122C738.66
Mouse Meningeal cells, donor1.CNhs12132.11716-123C628.80
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F539.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D936.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D442.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F451.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.87
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.67
Mouse Schwann, donor1.CNhs12507.11728-123D940.66
Mouse Schwann, donor2.CNhs12573.11746-123F931.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F727.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F631.36
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G629.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I866.25
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.23
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.49
accessory axillary lymph node, adult.CNhs10475.1063-29H926.93
adrenal gland, adult.CNhs10508.49-24D725.24
adrenal gland, embryo E14.CNhs11038.406-44C528.28
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I131.59
adrenal gland, embryo E18.CNhs11026.1262-18F525.02
adrenal gland, neonate N00.CNhs11191.1311-23C127.87
adrenal gland, neonate N25.CNhs11223.1377-27I334.18
amnion, adult pregnant day17.5.CNhs10488.583-22A833.37
aorta, adult.CNhs10498.46-23H121.40
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F526.53
bone (os femoris), neonate N16.CNhs11225.1525-43A629.81
bone (os femoris), neonate N20.CNhs11195.1350-25C333.46
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B227.23
cerebellum, neonate N30.CNhs11135.1395-42I230.37
colon, adult.CNhs10468.36-18H726.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.89
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D123.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.97
corpora quadrigemina, adult.CNhs10501.16-22A426.36
corpus striatum, adult.CNhs10487.19-21D835.23
corpus striatum, neonate N00.CNhs11226.630-43F152.40
cortex, adult.CNhs10473.12-14D531.29
cortex, neonate N30.CNhs11107.1392-42F236.06
diencephalon, adult.CNhs10482.20-12F222.65
diencephalon, neonate N30.CNhs11201.1388-42B233.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.48
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G419.78
eyeball, embryo E12.CNhs11016.345-16C624.72
eyeball, embryo E14.CNhs10521.399-16E227.13
eyeball, embryo E15.CNhs10593.426-16C925.75
eyeball, embryo E17.CNhs11023.1261-18D429.84
eyeball, neonate N00.CNhs11207.633-15C627.96
eyeball, neonate N01.CNhs11140.1532-43E730.88
eyeball, neonate N02.CNhs11205.1551-44G834.01
eyeball, neonate N16.CNhs11188.777-19A228.72
forelimb, embryo E11.CNhs10596.335-25E228.89
forelimb, embryo E12.CNhs10600.359-14H226.47
forelimb, embryo E13.CNhs10589.384-1E227.98
forelimb, embryo E14.CNhs10577.413-26A820.39
forelimb, embryo E15.CNhs11007.437-20E720.58
forelimb, embryo E17.CNhs10598.1517-43C426.82
forelimb, embryo E18.CNhs11008.1520-43B525.31
gonad, embryo E13.CNhs11044.1564-45I626.67
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.56
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.30
heart, embryo E11.CNhs10586.331-24E928.79
heart, embryo E12.CNhs11015.353-12F518.06
heart, embryo E13.CNhs11013.376-3I921.61
heart, embryo E14.CNhs10597.403-26D425.81
heart, embryo E15.CNhs11017.431-16C822.23
heart, embryo E16.CNhs11021.457-17C627.46
heart, embryo E17.CNhs11025.479-18E526.51
heart, embryo E18.CNhs11030.1283-20G329.24
heart, neonate N00.CNhs11213.639-21E331.06
heart, neonate N03.CNhs11221.1349-25I235.05
heart, neonate N10.CNhs11118.749-24G129.71
heart, neonate N16.CNhs11209.782-15G130.89
heart, neonate N20.CNhs11127.821-26I630.85
heart, neonate N25.CNhs11196.1351-25D327.88
heart, neonate N30.CNhs11202.1390-42D227.78
hippocampus, adult.CNhs10478.13-16E827.55
hippocampus, neonate N00.CNhs11228.627-43G140.34
intestinal mucosa, adult.CNhs10506.860-29I334.03
intestine, adult.CNhs10496.178-9A324.33
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D529.49
intestine, embryo E15.CNhs10602.976-16D823.84
intestine, embryo E16.CNhs10585.463-22H427.03
intestine, embryo E17.CNhs10582.482-18D321.57
intestine, embryo E18.CNhs10526.1289-20F722.64
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E924.05
intestine, neonate N06.CNhs11102.688-20B822.87
intestine, neonate N07.CNhs11095.720-20F224.27
intestine, neonate N10.CNhs11098.755-23A528.27
intestine, neonate N20.CNhs11187.827-18D126.07
intestine, neonate N25.CNhs11121.1352-25E328.31
intestine, neonate N30.CNhs11131.1384-42G131.46
kidney, embryo E14.CNhs10606.411-4I921.62
kidney, embryo E15.CNhs10997.434-16F825.02
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I227.90
kidney, embryo E18.CNhs11001.1288-20C726.57
kidney, neonate N00.CNhs11214.646-21G729.67
kidney, neonate N10.CNhs11206.758-6D529.78
kidney, neonate N20.CNhs11113.832-19I131.44
kidney, neonate N25.CNhs11122.1353-25F330.30
kidney, neonate N30.CNhs11203.1385-42H129.62
liver, adult pregnant day01.CNhs10466.508-5B241.80
liver, embryo E12.CNhs10601.355-15F832.03
liver, embryo E13.CNhs10524.378-3H628.30
liver, embryo E14.CNhs10594.409-16E131.93
liver, embryo E15.CNhs10520.433-16D735.09
liver, embryo E16.CNhs10523.462-17F533.76
liver, embryo E17.CNhs10510.481-18A326.99
liver, embryo E18.CNhs10579.499-43G426.18
liver, neonate N00.CNhs11117.641-24F426.75
liver, neonate N03.CNhs11123.1345-25G232.40
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H231.63
liver, neonate N10.CNhs11115.751-24B934.95
liver, neonate N20.CNhs11220.823-25A342.94
liver, neonate N25.CNhs11198.1368-26H147.18
liver, neonate N30.CNhs11106.1382-42D140.53
lung, adult.CNhs10474.28-22B129.01
lung, embryo E12.CNhs10522.354-16G227.48
lung, embryo E14.CNhs10604.404-26F828.19
lung, embryo E15.CNhs11020.432-17C524.44
lung, embryo E16.CNhs10998.458-17B622.53
lung, embryo E17.CNhs10605.480-44A620.27
lung, embryo E18.CNhs10583.1287-20I624.28
lung, neonate N00.CNhs11224.640-42C631.61
lung, neonate N06.CNhs11212.683-20E529.79
lung, neonate N07.CNhs11111.715-19A329.68
lung, neonate N10.CNhs11219.750-23E634.12
lung, neonate N20.CNhs11109.822-18A433.10
lung, neonate N25.CNhs11119.1359-25C735.75
lung, neonate N30.CNhs11133.1394-42H229.07
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A124.48
mammary gland, adult lactating day02.CNhs10480.595-22B619.18
mammary gland, adult pregnant day19.CNhs10476.588-5H225.94
medulla oblongata, adult.CNhs10477.17-12C224.08
medulla oblongata, neonate N30.CNhs11200.1396-42A326.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.21
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.65
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I722.14
ovary, embryo E18.CNhs11040.505-44H730.63
ovary, neonate N00.CNhs11217.1299-22I433.72
oviduct, adult pregnant day01.CNhs10500.988-6G622.77
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F227.81
pancreas, embryo E16.CNhs11003.460-26E519.24
pancreas, embryo E17.CNhs10599.1558-45G317.42
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G929.98
pancreas, neonate N01.CNhs11138.1531-43D728.72
pancreas, neonate N02.CNhs11139.1539-43D822.10
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G818.04
pituitary gland, embryo E12.CNhs11018.346-16E626.65
pituitary gland, embryo E13.CNhs11009.370-44C730.53
pituitary gland, embryo E14.CNhs11037.398-44A529.36
pituitary gland, embryo E15.CNhs10592.427-16B930.86
pituitary gland, embryo E16.CNhs11036.449-43F624.97
pituitary gland, embryo E17.CNhs11039.1265-44F524.85
pituitary gland, neonate N00.CNhs11190.1308-22E933.19
placenta, adult pregnant day10.CNhs10472.539-13I720.65
placenta, adult pregnant day17.CNhs10464.577-18G329.02
prostate, adult.CNhs10470.859-1F828.23
skin, adult.CNhs10492.30-1C328.20
skin, neonate N00.CNhs11124.650-25G431.32
skin, neonate N03.CNhs11215.662-22H333.78
skin, neonate N06.CNhs11097.693-20I534.86
skin, neonate N10.CNhs11108.762-6C430.53
small intestine, neonate N16.CNhs11114.790-21I137.31
spinal cord, adult.CNhs10505.24-13C922.81
spleen, adult.CNhs10465.25-2G234.52
spleen, embryo E16.CNhs11035.461-43C129.10
spleen, embryo E18.CNhs11011.1271-21F227.04
spleen, neonate N10.CNhs11116.752-24D133.72
spleen, neonate N20.CNhs11112.824-19H135.95
spleen, neonate N25.CNhs11099.1354-25G338.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.53
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E326.41
stomach, embryo E15.CNhs10603.1252-16G825.21
stomach, embryo E16.CNhs11022.459-17D427.87
stomach, embryo E17.CNhs11006.1035-18D527.18
stomach, embryo E18.CNhs10999.1286-20C626.42
stomach, neonate N03.CNhs11193.1340-24B829.40
stomach, neonate N07.CNhs11210.718-18A932.98
stomach, neonate N25.CNhs11104.1355-25E435.60
stomach, neonate N30.CNhs11134.1386-42I133.57
submandibular gland, adult.CNhs10469.59-29C131.07
testis, adult.CNhs10504.57-7G5193.91
testis, embryo E13.CNhs11031.389-23F527.21
testis, embryo E15.CNhs11034.443-27C534.58
testis, embryo E16.CNhs11033.470-26G531.89
testis, embryo E17.CNhs11029.486-18I528.29
testis, embryo E18.CNhs11027.503-18G522.64
testis, neonate N00.CNhs11189.1300-22B729.10
testis, neonate N07.CNhs11222.726-26I429.56
testis, neonate N10.CNhs11204.763-44D929.47
testis, neonate N20.CNhs11110.839-18H378.27
testis, neonate N30.CNhs11130.1391-42E2114.92
thymus, adult.CNhs10471.38-12B527.18
thymus, embryo E14.CNhs11041.402-44I430.21
thymus, embryo E15.CNhs11005.430-45I223.21
thymus, embryo E16.CNhs11002.456-26C523.26
thymus, embryo E17.CNhs10581.478-18C122.56
thymus, embryo E18.CNhs10595.1273-19G425.83
thymus, neonate N02.CNhs11181.1541-43F837.14
thymus, neonate N03.CNhs11137.2104-43C727.77
thymus, neonate N06.CNhs11197.681-26C428.98
thymus, neonate N07.CNhs11211.713-19D331.24
thymus, neonate N10.CNhs11194.748-24E432.47
thymus, neonate N20.CNhs11186.820-7A230.99
thymus, neonate N25.CNhs11125.1362-25G732.52
thymus, neonate N30.CNhs11132.1393-42G230.39
tongue, adult.CNhs10499.32-1B439.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F719.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.14
urinary bladder, adult.CNhs10481.879-12E423.96
uterus, adult pregnant day19.CNhs10497.590-15F523.84
uterus, adult.CNhs10509.92-27E527.47
vagina, adult.CNhs10502.89-27D537.73
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.97
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I828.96
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H228.68
whole body, embryo E14.5.CNhs10578.420-27D224.07
whole body, embryo E14.CNhs10519.395-14B127.88
whole body, embryo E16.CNhs10514.453-14F225.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.97
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.36
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.25
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.97
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G533.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.80
whole body, embryo E17.5.CNhs10513.490-9F922.96
whole body, embryo E17.CNhs10517.475-3I529.98
whole body, embryo E18.CNhs10516.493-3B320.82
whole body, neonate N00.CNhs10525.657-19C224.07
whole body, neonate N01.CNhs10576.659-23C623.53
whole body, neonate N06.CNhs10515.692-21D124.04
whole body, neonate N10.CNhs10518.761-6B426.20





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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