FFCP PHASE1:Mm9::chr5:66728886..66728916,-: Difference between revisions
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{{FFCP|EntrezGene=11787|HGNC=|MCL_coexpression_id=184|UniProt=Q3T9N0|association_with_transcript=0bp_to_ENSMUST00000160775,ENSMUST00000162955,NM_001201416,uc008xow.2_5end|description=CAGE_peak_4_at_Apbb2_5end|id=chr5:66728886..66728916,-|ontology_enrichment_celltype=CL:0000117!3.20e-13!23;CL:0000337!3.20e-13!23;CL:0000393!4.45e-09!39;CL:0000211!4.45e-09!39;CL:0000540!7.86e-08!33;CL:0000047!7.86e-08!33;CL:0000031!7.86e-08!33;CL:0000404!7.86e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-15,23;CL:0000337,2.36e-15,23;CL:0000393,3.93e-09,39;CL:0000211,3.93e-09,39;CL:0000540,4.34e-08,33;CL:0000047,4.34e-08,33;CL:0000031,4.34e-08,33;CL:0000404,4.34e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.58e-14!63;UBERON:0002346!1.28e-12!71;UBERON:0003075!1.28e-12!71;UBERON:0007284!1.28e-12!71;UBERON:0003056!3.00e-12!49;UBERON:0001049!7.02e-12!52;UBERON:0005068!7.02e-12!52;UBERON:0006241!7.02e-12!52;UBERON:0007135!7.02e-12!52;UBERON:0000955!2.59e-10!50;UBERON:0006238!2.59e-10!50;UBERON:0002616!3.60e-10!49;UBERON:0001017!1.29e-09!73;UBERON:0005743!1.29e-09!73;UBERON:0000073!1.34e-08!75;UBERON:0001016!1.34e-08!75;UBERON:0003080!3.86e-08!40;UBERON:0004121!6.72e-08!102;UBERON:0000924!6.72e-08!102;UBERON:0006601!6.72e-08!102;UBERON:0002780!1.09e-07!39;UBERON:0001890!1.09e-07!39;UBERON:0006240!1.09e-07!39;UBERON:0002020!1.97e-07!34;UBERON:0000468!6.93e-07!333;UBERON:0000153!8.80e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.50e-15,64;UBERON:0003075,2.50e-15,64;UBERON:0007284,2.50e-15,64;UBERON:0010314,1.63e-13,92;UBERON:0000073,7.60e-13,54;UBERON:0003056,3.59e-12,49;UBERON:0010371,4.47e-12,73;UBERON:0001049,4.49e-12,52;UBERON:0005068,4.49e-12,52;UBERON:0006241,4.49e-12,52;UBERON:0007135,4.49e-12,52;UBERON:0004121,3.48e-10,95;UBERON:0000924,3.48e-10,95;UBERON:0006601,3.48e-10,95;UBERON:0001017,1.36e-09,73;UBERON:0000955,5.51e-09,47;UBERON:0006238,5.51e-09,47;UBERON:0001016,7.16e-09,75;UBERON:0002616,8.05e-09,46;UBERON:0003080,1.27e-07,40;UBERON:0002780,3.94e-07,39;UBERON:0001890,3.94e-07,39;UBERON:0006240,3.94e-07,39;UBERON:0000020,8.53e-07,12;UBERON:0001032,8.53e-07,12;UBERON:0004456,8.53e-07,12;UBERON:0002020,9.08e-07,34|phase1_expression=1.60148847104794,0.697950815278722,0.454999239389536,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0.95995453676044,0.22940928106717,0,0.86152399231815,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.92616169317078,0.917733760808408,0,1.30815093828268,0.659058548203415,0.972149495371417,0.419959264876088,0,0,0,0,2.05807548828758,10.601737277734,3.09403255366465,11.1274053472779,17.4567023159771,8.23980824558033,0,0,0,0,0,0,0,4.56234294157302,5.67024940993101,2.3135745748652,4.57041575046086,3.3130281142742,16.1687854963739,18.2106394934649,14.7075005857603,5.50579404996943,3.44755812830007,3.37934373163736,11.4741070325269,11.0700048758916,5.73004707612436,4.74611098302348,2.25105044012672,6.26472815884921,6.18720029494702,7.26095572075425,11.183966749518,0,0,0.579728977403356,0,0,0.539703191637817,0,0,1.40444420131752,0.170430322578058,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0.867426633830679,1.52232739156071,0.230615497256059,0,0.352766121407114,0.125666591329675,0.247194967734374,1.73519228303894,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,2.04946557908083,2.72280718857492,0.255457055208591,0.11981512450592,0.599902730993408,0,5.69204429738326,7.32000964509802,28.5235379296202,1.04294592115366,2.81287003063364,6.44142938134636,6.48965052271031,0.611036183101898,0.995255764880744,2.27450482590307,2.10441855886474,2.99277018814219,6.89706313300419,14.945156773844,12.0563854268572,10.6136938676071,11.0177799444971,4.8724896771059,4.9153640440413,2.15567992932842,3.40390944302075,1.58356011747554,1.09597866213787,1.39023624612799,0.696504333044333,0.61734640922383,1.39323986772945,0,0,0,1.03562886267751,0.938104239924385,1.08037236876609,2.84093682702252,1.77087808572663,2.77680803197281,1.16266972375204,2.68273401399619,1.86824547787471,1.15191894939436,0.820837320395476,0.891756905004413,1.02339991197733,0.658650345873152,0.805238512562231,3.57492912559016,13.5834088340655,0,0.528901133327089,2.98603550749328,3.25131340604614,3.35055399437443,2.42020229548011,0.667134131534611,2.28270751335071,0.474529061544512,1.31759163779209,3.01602250560323,2.38747766449381,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,2.27601481143698,1.48523066392647,1.1270773567308,1.01825663922657,0.775809948670503,1.1221731182451,0.569128834118316,0.442830443938806,0.627994911365499,0.370191491765402,0,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0.744281895337007,0,0,0,0,1.10851914099963,1.32643988239339,1.62964976442026,1.86719594352707,0.469380496577004,0.3350125148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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11787 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=Q3T9N0 | |||
|association_with_transcript=0bp_to_ENSMUST00000160775,ENSMUST00000162955,NM_001201416,uc008xow.2_5end | |||
|cluster_id=chr5:66728886..66728916,- | |||
|description=CAGE_peak_4_at_Apbb2_5end | |||
|id=chr5:66728886..66728916,- | |||
|ontology_enrichment_celltype=CL:0000117!3.20e-13!23;CL:0000337!3.20e-13!23;CL:0000393!4.45e-09!39;CL:0000211!4.45e-09!39;CL:0000540!7.86e-08!33;CL:0000047!7.86e-08!33;CL:0000031!7.86e-08!33;CL:0000404!7.86e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.36e-15,23;CL:0000337,2.36e-15,23;CL:0000393,3.93e-09,39;CL:0000211,3.93e-09,39;CL:0000540,4.34e-08,33;CL:0000047,4.34e-08,33;CL:0000031,4.34e-08,33;CL:0000404,4.34e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.58e-14!63;UBERON:0002346!1.28e-12!71;UBERON:0003075!1.28e-12!71;UBERON:0007284!1.28e-12!71;UBERON:0003056!3.00e-12!49;UBERON:0001049!7.02e-12!52;UBERON:0005068!7.02e-12!52;UBERON:0006241!7.02e-12!52;UBERON:0007135!7.02e-12!52;UBERON:0000955!2.59e-10!50;UBERON:0006238!2.59e-10!50;UBERON:0002616!3.60e-10!49;UBERON:0001017!1.29e-09!73;UBERON:0005743!1.29e-09!73;UBERON:0000073!1.34e-08!75;UBERON:0001016!1.34e-08!75;UBERON:0003080!3.86e-08!40;UBERON:0004121!6.72e-08!102;UBERON:0000924!6.72e-08!102;UBERON:0006601!6.72e-08!102;UBERON:0002780!1.09e-07!39;UBERON:0001890!1.09e-07!39;UBERON:0006240!1.09e-07!39;UBERON:0002020!1.97e-07!34;UBERON:0000468!6.93e-07!333;UBERON:0000153!8.80e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.50e-15,64;UBERON:0003075,2.50e-15,64;UBERON:0007284,2.50e-15,64;UBERON:0010314,1.63e-13,92;UBERON:0000073,7.60e-13,54;UBERON:0003056,3.59e-12,49;UBERON:0010371,4.47e-12,73;UBERON:0001049,4.49e-12,52;UBERON:0005068,4.49e-12,52;UBERON:0006241,4.49e-12,52;UBERON:0007135,4.49e-12,52;UBERON:0004121,3.48e-10,95;UBERON:0000924,3.48e-10,95;UBERON:0006601,3.48e-10,95;UBERON:0001017,1.36e-09,73;UBERON:0000955,5.51e-09,47;UBERON:0006238,5.51e-09,47;UBERON:0001016,7.16e-09,75;UBERON:0002616,8.05e-09,46;UBERON:0003080,1.27e-07,40;UBERON:0002780,3.94e-07,39;UBERON:0001890,3.94e-07,39;UBERON:0006240,3.94e-07,39;UBERON:0000020,8.53e-07,12;UBERON:0001032,8.53e-07,12;UBERON:0004456,8.53e-07,12;UBERON:0002020,9.08e-07,34 | |||
|phase1_expression=1.60148847104794,0.697950815278722,0.454999239389536,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0.95995453676044,0.22940928106717,0,0.86152399231815,0.646413698057667,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.92616169317078,0.917733760808408,0,1.30815093828268,0.659058548203415,0.972149495371417,0.419959264876088,0,0,0,0,2.05807548828758,10.601737277734,3.09403255366465,11.1274053472779,17.4567023159771,8.23980824558033,0,0,0,0,0,0,0,4.56234294157302,5.67024940993101,2.3135745748652,4.57041575046086,3.3130281142742,16.1687854963739,18.2106394934649,14.7075005857603,5.50579404996943,3.44755812830007,3.37934373163736,11.4741070325269,11.0700048758916,5.73004707612436,4.74611098302348,2.25105044012672,6.26472815884921,6.18720029494702,7.26095572075425,11.183966749518,0,0,0.579728977403356,0,0,0.539703191637817,0,0,1.40444420131752,0.170430322578058,0,0,1.69012103732017,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0.867426633830679,1.52232739156071,0.230615497256059,0,0.352766121407114,0.125666591329675,0.247194967734374,1.73519228303894,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,2.04946557908083,2.72280718857492,0.255457055208591,0.11981512450592,0.599902730993408,0,5.69204429738326,7.32000964509802,28.5235379296202,1.04294592115366,2.81287003063364,6.44142938134636,6.48965052271031,0.611036183101898,0.995255764880744,2.27450482590307,2.10441855886474,2.99277018814219,6.89706313300419,14.945156773844,12.0563854268572,10.6136938676071,11.0177799444971,4.8724896771059,4.9153640440413,2.15567992932842,3.40390944302075,1.58356011747554,1.09597866213787,1.39023624612799,0.696504333044333,0.61734640922383,1.39323986772945,0,0,0,1.03562886267751,0.938104239924385,1.08037236876609,2.84093682702252,1.77087808572663,2.77680803197281,1.16266972375204,2.68273401399619,1.86824547787471,1.15191894939436,0.820837320395476,0.891756905004413,1.02339991197733,0.658650345873152,0.805238512562231,3.57492912559016,13.5834088340655,0,0.528901133327089,2.98603550749328,3.25131340604614,3.35055399437443,2.42020229548011,0.667134131534611,2.28270751335071,0.474529061544512,1.31759163779209,3.01602250560323,2.38747766449381,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,2.27601481143698,1.48523066392647,1.1270773567308,1.01825663922657,0.775809948670503,1.1221731182451,0.569128834118316,0.442830443938806,0.627994911365499,0.370191491765402,0,0.500535317148282,0.589676985339609,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0,0.324270453550071,0.549122826376163,0,0.744281895337007,0,0,0,0,1.10851914099963,1.32643988239339,1.62964976442026,1.86719594352707,0.469380496577004,0.335012514883631,0.714130922658041,0,0.630540576424764,0.44292937929755,0.318909537314974,0.491589944147214,0.172684981865896,1.15719246865209,0,0,0,0.275936746304732,12.36239542906,12.0728037189969,0,0.504941854408746,0.94652465824877,0.390438744296638,0.646270193198397,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,0.567760340833074,1.42452482933804,0.977321756121456,0.989820737835213,0,0.971122544619926,0.604647113929502,0.943025398779491,0,2.15204603560749,1.03371317267288,2.18120237686503,0.712994756769443,1.58018378967908,0,0,1.36175842301515,2.70091641046965,2.32845630808958,1.50035924522115,2.6601035046341,1.42695054081656,2.63278432963394,4.87143918583359,0,0.21183207086382,0,0.49465875882444,0.322928853391811,0.120625849856312,0.238744688006273,0,0.874442509889552,18.7279555030615,0.341741761595705,1.65109494370578,0.555583582109135,0,0.136694227721025,0,0.679913719975421,1.95932033253121,0.690999869022119,4.77335309007557,2.84702394223022,3.45643094115643,3.24016022465404,2.92723614420256,2.62035076495413,4.72025212346872,4.1326727862668,2.6175594198403,0.129614973291793,0,0,0.897099276263873,1.32366792365678,1.94451188344048,0.904118764344118,0.675824501963113,1.05621514781179,2.3436789271911,2.30690557736564,0.966336483304024,0,0.316011120628178,1.62180172232131,2.56777392912068,1.03936658382236,0.716106782669926,0.198681354781265,0.721172697119813,0.443068581523732,0.302899349844443,0.228620419965,0,0.0974578807397524,0.192423683280659,0,2.72076460338254,0,0,0,0.19318959403219,0.750729901804728,1.83151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,1.03111909406213,0,0.755393897389701,0.675022500231806,2.2516060161211,0.906284817968409,0.51776031175182,3.73634451303036,5.58634822761443,5.29274177837816,1.70174701947806,4.61148957781561,4.41224420280034,3.33370091702423,2.67845574410562,5.45562656306086,3.53776096469316,3.04175159868288,3.77252682772152,2.90288673156635,3.13723246783859,2.64203157195821,1.42888107384922,2.31768651889711,1.73618298417335,1.64834360321323,1.61918812147837,3.42869252385415,2.12970967391205,2.14592570952589,4.21504608233753,2.91739079287525,3.72304274723377,2.0122077016005,2.10455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| |||
|short_description=p4@Apbb2 | |||
}} |
Latest revision as of 04:08, 26 September 2015
Short description: | p4@Apbb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Apbb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 0bp_to_ENSMUST00000160775, ENSMUST00000162955, NM_001201416, uc008xow.2_5end |
EntrezGene: | Apbb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.36e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-15 | 23 |
electrically responsive cell | 3.93e-09 | 39 |
electrically active cell | 3.93e-09 | 39 |
neuron | 4.34e-08 | 33 |
neuronal stem cell | 4.34e-08 | 33 |
neuroblast | 4.34e-08 | 33 |
electrically signaling cell | 4.34e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.50e-15 | 64 |
neural plate | 2.50e-15 | 64 |
presumptive neural plate | 2.50e-15 | 64 |
structure with developmental contribution from neural crest | 1.63e-13 | 92 |
regional part of nervous system | 7.60e-13 | 54 |
pre-chordal neural plate | 3.59e-12 | 49 |
ecto-epithelium | 4.47e-12 | 73 |
neural tube | 4.49e-12 | 52 |
neural rod | 4.49e-12 | 52 |
future spinal cord | 4.49e-12 | 52 |
neural keel | 4.49e-12 | 52 |
ectoderm-derived structure | 3.48e-10 | 95 |
ectoderm | 3.48e-10 | 95 |
presumptive ectoderm | 3.48e-10 | 95 |
central nervous system | 1.36e-09 | 73 |
brain | 5.51e-09 | 47 |
future brain | 5.51e-09 | 47 |
nervous system | 7.16e-09 | 75 |
regional part of brain | 8.05e-09 | 46 |
anterior neural tube | 1.27e-07 | 40 |
regional part of forebrain | 3.94e-07 | 39 |
forebrain | 3.94e-07 | 39 |
future forebrain | 3.94e-07 | 39 |
sense organ | 8.53e-07 | 12 |
sensory system | 8.53e-07 | 12 |
entire sense organ system | 8.53e-07 | 12 |
gray matter | 9.08e-07 | 34 |