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FFCP PHASE1:Mm9::chr19:7557731..7557769,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:7557731..7557769,-
|DHSsupport=NA
|short_description=p1@Rtn3
|DPIdataset=NA
|description=CAGE_peak_1_at_Rtn3_5end
|association_with_transcript=1bp_to_ENSMUST00000025667,NM_053076_5end
|EntrezGene=20168
|EntrezGene=20168
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9ES97
|UniProt=Q9ES97
|association_with_transcript=1bp_to_ENSMUST00000025667,NM_053076_5end
|cluster_id=chr19:7557731..7557769,-
|description=CAGE_peak_1_at_Rtn3_5end
|id=chr19:7557731..7557769,-
|ontology_enrichment_celltype=CL:0000117!8.02e-13!23;CL:0000337!8.02e-13!23;CL:0000221!9.23e-09!44;CL:0000133!9.23e-09!44;CL:0002319!1.27e-08!43;CL:0000540!1.80e-08!33;CL:0000047!1.80e-08!33;CL:0000031!1.80e-08!33;CL:0000404!1.80e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,8.02e-13,23;CL:0000337,8.02e-13,23;CL:0000221,9.23e-09,44;CL:0000133,9.23e-09,44;CL:0002319,1.27e-08,43;CL:0000540,1.80e-08,33;CL:0000047,1.80e-08,33;CL:0000031,1.80e-08,33;CL:0000404,1.80e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-26,54;UBERON:0001017,4.32e-26,73;UBERON:0002346,5.42e-25,64;UBERON:0003075,5.42e-25,64;UBERON:0007284,5.42e-25,64;UBERON:0001049,1.11e-24,52;UBERON:0005068,1.11e-24,52;UBERON:0006241,1.11e-24,52;UBERON:0007135,1.11e-24,52;UBERON:0001016,6.87e-24,75;UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0010371,1.09e-21,73;UBERON:0000955,1.67e-21,47;UBERON:0006238,1.67e-21,47;UBERON:0002616,5.78e-21,46;UBERON:0003056,7.89e-19,49;UBERON:0002020,1.92e-18,34;UBERON:0003080,2.74e-18,40;UBERON:0002780,1.27e-17,39;UBERON:0001890,1.27e-17,39;UBERON:0006240,1.27e-17,39;UBERON:0003528,1.22e-15,29;UBERON:0002791,1.22e-15,29;UBERON:0001893,1.22e-15,29;UBERON:0000025,8.20e-14,114;UBERON:0010314,1.41e-13,92;UBERON:0004111,7.63e-13,122;UBERON:0000956,2.29e-11,21;UBERON:0001869,2.29e-11,21;UBERON:0000203,2.29e-11,21;UBERON:0002619,1.19e-09,17;UBERON:0000483,5.40e-09,174;UBERON:0000119,6.67e-09,176;UBERON:0002021,6.22e-08,10;UBERON:0000411,6.22e-08,10;UBERON:0001950,6.22e-08,10;UBERON:0003076,5.57e-07,12;UBERON:0003057,5.57e-07,12
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55012998,59.0789214295253,56.2447516278921,62.4516932314068,63.2513784544809,71.4125857466902,65.9624973799755,51.32752942355,112.462415668734,84.5539408026285,64.1425982528669,59.7305150550122,65.7245016602881,68.5838662666752,81.7747647375366,78.5119926540094,64.0605573432235,62.0767319000208,95.6673118470984,76.3279516583343,151.685337901526,103.592585013274,86.3799149756197,102.50752932948,148.055077317007,122.189033190478,105.171018329973,120.810033228804,105.711873095711,127.646401147125,113.429458278946,125.91558191576,112.375431035905,117.69504049684,37.4105132965099,62.6000388514862,31.6689913831449,43.1463464055682,74.3779937023933,38.2872249920411,40.8428122116001,25.5098371104088,102.320709223214,939.747066114799,808.331115306603,881.686195183231,692.740178027405,672.065951895,648.127963960363,650.046667723229,608.383945555922,624.883381989218,665.83976091284,42.1376631191757,114.919163539497,93.9034831647738,93.1098726371566,61.6262698126268,66.3675065504551,90.676664943059,96.2183717305636,101.410470231014,89.9602073879119,107.982181753242,95.6335550827406,76.2241870804843,81.3759687065888,83.3963009235505,90.495801343784,76.0201178198252,73.6913222171353,76.647977549415,89.9385402021168,83.3172283296559,77.9118789039492,72.0077293640909,93.6030923112196,90.0626770574714,86.3915146574017,84.1468675214754,92.3374687146828,77.2725407782954,112.228454331548,82.451337596301,78.4095679709485,75.2985119432228,78.2431047989128,86.0363484975891,150.136157340705,89.5958060345914,117.749337618467,88.1839210837368,86.9130191330891,74.8933109053961
|phase1_expression=62.6181992179744,36.9913932097723,31.394947517878,21.4749590027849,30.0537437967808,26.6928042339905,34.5746708081378,64.5616617207881,28.298533152485,35.577808000943,13.8686554262659,18.1880522509367,63.0018686146837,65.4778814118291,80.945672121206,66.8168382386426,74.8531209597117,74.7645331899023,72.1221920766186,67.4779546358868,135.559004500805,90.5533474952074,94.5543236682946,59.0372040107671,60.1052316395985,33.3054539186712,30.1533397311352,35.5527533931717,52.8265106088719,50.910086211506,59.645507366277,24.7661962649256,27.6779154413057,47.5445043046316,37.839562187417,45.0495888921514,33.4837744270285,387.978821693113,266.435352482616,315.6848176162,392.938634004718,351.7684247536,366.07480618549,58.2902267226923,54.9462967209769,42.5828465015101,101.710874765245,138.227949145203,85.8972974491785,121.907546719576,134.526951181973,165.315449019717,88.2536507863693,65.282592781021,83.3512621873311,45.5349201783626,59.3124220673226,53.629897596854,265.843829569511,386.692405847856,313.112713332053,62.3473939007203,110.272554717781,120.586562115707,132.508092583975,96.6252956326696,145.306053601426,136.01328008383,166.110758918181,179.017874227822,178.986542110026,530.453878037863,496.070742977324,192.433045566693,181.339631166503,255.542822677586,1030.68464615428,598.470553605275,709.815790177101,354.642227706491,351.95296493847,313.589849075169,661.384524634271,502.54701075829,556.491218403142,525.617396485023,450.606369729161,302.899099466113,21.0518817466252,50.9352315119734,43.7695377939533,60.229671388697,69.3570760381906,119.274405351958,151.397905265307,118.727125080794,92.5528728668245,28.8027245156918,23.6405264188611,31.4472221314203,106.618468770947,19.2489716121477,7.64415719119937,14.2213340630666,30.7417278235924,34.7103015700885,32.3535644809461,86.3230130676093,97.1017063676894,59.3768556259299,68.3532187458575,63.3288194889254,70.5683421603539,53.506537396181,65.1441437531805,38.0769771728917,72.6753205139059,93.8449826410227,168.960615422426,49.1771223840124,71.3318104627071,73.7010384765538,50.325775528893,308.883740847182,221.594615808635,61.3096932500619,110.469544794458,79.1871604911298,113.854923457466,650.091375016931,457.043102215808,231.455316591896,646.974119755653,588.912698231751,572.248274717028,513.00687382025,72.8151451529761,93.4296349281799,215.067067427057,200.340646803923,71.566243629487,78.3966176118143,99.9344820419688,99.4651797715719,139.542859759373,129.010516326844,123.124066071484,199.71900221052,93.3409409399207,70.3474618224288,66.6854760581366,68.6082642498309,69.5118123063995,57.1133553096353,50.0050591471303,57.321868843726,127.100586903696,137.423782399258,132.420190718346,105.219892448035,101.784310031796,88.4104721773583,109.139323104782,100.940050886418,92.7145348453143,86.7351613919021,82.8964810324823,80.1010248638783,78.4950484087302,81.098727255073,69.7191762094359,69.5911940144582,70.2560368931362,73.1424982244026,525.30429151319,252.116300329247,48.2411423156345,62.67478429926,73.5844464346557,72.6900782923173,73.196718030949,88.7407508342707,84.058900573361,89.7864955251279,59.7906617546085,75.102723354149,69.8711880464749,80.5773711766661,68.4323945788112,65.6138168317582,58.1411354162927,54.9629914182053,88.5749097450891,73.5760421206654,99.1828073923108,82.8860904330429,80.8781871488999,89.0724912607046,119.137635942101,137.12982747305,137.530885589044,143.26410731321,82.4138303302274,104.611881283991,116.166366111903,112.880780417197,119.890331740605,111.665024965369,99.0494563429723,111.050709056013,87.228752004969,86.7614065674338,100.637744569148,103.827324399512,86.4344354527333,88.6551861594362,96.5158084747888,91.6642690590398,118.796301277127,70.8697880021613,79.8528384565927,71.292936025579,77.4477819352057,85.5956975527678,92.5989763046593,71.6140487638122,86.2264238260865,87.9214817905636,80.843567709346,91.1080029819503,83.0614762774958,97.6381145425203,91.9826832029561,112.044570866654,193.7551235695,108.995014790369,678.486793288409,589.340360185598,16.2295595922909,46.9595924600134,82.9786617064755,90.9722274211168,114.389824196116,63.5657002553788,59.4872459799992,61.9937602427543,79.3428975282793,97.6134565423782,99.6125200425239,349.597592266926,69.6925818372599,82.8005057052737,66.2949924569055,72.4218839849431,100.886305138372,91.042738558118,91.3017142033548,93.3595144791696,101.288549258105,81.1628790571968,59.6969357218591,76.3420831902762,74.5079520824068,71.7403440514302,84.334886859999,85.6025008959951,124.260456100133,90.2106081096864,103.098870974855,109.740561936175,118.463276073039,117.723419617367,125.550902719418,111.434171375943,52.5664626062711,81.3435152117069,128.568056066043,45.013947053024,56.1896204901751,65.4998364719773,87.3805558102959,84.5325633687065,59.4620906724896,690.152974083117,104.572979048286,69.7587613715692,82.5967592068914,96.0679130723924,106.074720711516,87.3932621648917,89.5786326067617,102.724366005565,91.626582632333,82.1016731492998,87.1505662316028,74.2116055012998,59.0789214295253,56.2447516278921,62.4516932314068,63.2513784544809,71.4125857466902,65.9624973799755,51.32752942355,112.462415668734,84.5539408026285,64.1425982528669,59.7305150550122,65.7245016602881,68.5838662666752,81.7747647375366,78.5119926540094,64.0605573432235,62.0767319000208,95.6673118470984,76.3279516583343,151.685337901526,103.592585013274,86.3799149756197,102.50752932948,148.055077317007,122.189033190478,105.171018329973,120.810033228804,105.711873095711,127.646401147125,113.429458278946,125.91558191576,112.375431035905,117.69504049684,37.4105132965099,62.6000388514862,31.6689913831449,43.1463464055682,74.3779937023933,38.2872249920411,40.8428122116001,25.5098371104088,102.320709223214,939.747066114799,808.331115306603,881.686195183231,692.740178027405,672.065951895,648.127963960363,650.046667723229,608.383945555922,624.883381989218,665.83976091284,42.1376631191757,114.919163539497,93.9034831647738,93.1098726371566,61.6262698126268,66.3675065504551,90.676664943059,96.2183717305636,101.410470231014,89.9602073879119,107.982181753242,95.6335550827406,76.2241870804843,81.3759687065888,83.3963009235505,90.495801343784,76.0201178198252,73.6913222171353,76.647977549415,89.9385402021168,83.3172283296559,77.9118789039492,72.0077293640909,93.6030923112196,90.0626770574714,86.3915146574017,84.1468675214754,92.3374687146828,77.2725407782954,112.228454331548,82.451337596301,78.4095679709485,75.2985119432228,78.2431047989128,86.0363484975891,150.136157340705,89.5958060345914,117.749337618467,88.1839210837368,86.9130191330891,74.8933109053961
|short_description=p1@Rtn3
}}
}}

Latest revision as of 04:06, 26 September 2015

Short description:p1@Rtn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtn3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 1bp_to_ENSMUST00000025667, NM_053076_5end
EntrezGene:Rtn3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rtn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G762.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I536.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I631.39
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E728.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F235.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E463.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E865.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A180.95
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A366.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A574.85
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A274.76
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A472.12
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A667.48
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3135.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H290.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I994.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D159.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D260.11
GP2+ M cell, pool1.CNhs13228.11845-124H933.31
GP2+ M cell, pool2.CNhs13231.11846-124I130.15
GP2+ M cell, pool3.CNhs13240.11847-124I235.55
Ileum epithelium, pool1.CNhs13199.10252-104B952.83
Ileum epithelium, pool2.CNhs13232.10253-104C150.91
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C859.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F645.05
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8387.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1266.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3315.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9392.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2351.77
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4366.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D858.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D954.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7101.71
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2138.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B885.90
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3121.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C4134.53
Mouse Astrocytes, donor3.CNhs12107.11633-122C4165.32
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A288.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I965.28
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A183.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C145.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E159.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C553.63
Mouse Granule cells, donor1.CNhs12131.11713-123C3265.84
Mouse Granule cells, donor2.CNhs12357.11731-123E3386.69
Mouse Granule cells, donor3.CNhs12108.11636-122C7313.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C662.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1110.27
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7120.59
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7132.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D296.63
Mouse Microglia, donor1.CNhs12629.11718-123C8145.31
Mouse Microglia, donor2.CNhs12634.11736-123E8136.01
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5166.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5179.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9178.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1530.45
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5496.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2192.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2181.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6255.54
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31030.68
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3598.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7709.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4354.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4351.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8313.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4661.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5502.55
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6556.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6525.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6450.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1302.90
Mouse Schwann, donor1.CNhs12507.11728-123D921.05
Mouse Schwann, donor2.CNhs12573.11746-123F950.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F760.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C469.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C8119.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F4151.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F6118.73
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A792.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I831.45
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6106.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.35
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B686.32
accessory axillary lymph node, adult.CNhs10475.1063-29H997.10
adrenal gland, adult.CNhs10508.49-24D759.38
adrenal gland, embryo E14.CNhs11038.406-44C568.35
adrenal gland, embryo E16.CNhs11004.1254-43D663.33
adrenal gland, embryo E17.CNhs11043.1263-45I170.57
adrenal gland, embryo E18.CNhs11026.1262-18F553.51
adrenal gland, neonate N00.CNhs11191.1311-23C165.14
adrenal gland, neonate N25.CNhs11223.1377-27I338.08
amnion, adult pregnant day17.5.CNhs10488.583-22A872.68
aorta, adult.CNhs10498.46-23H193.84
bone (os femoris), adult.CNhs10483.56-12G2168.96
bone (os femoris), neonate N02.CNhs11227.1985-43F549.18
bone (os femoris), neonate N16.CNhs11225.1525-43A671.33
bone (os femoris), neonate N20.CNhs11195.1350-25C373.70
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B2308.88
cerebellum, neonate N30.CNhs11135.1395-42I2221.59
colon, adult.CNhs10468.36-18H761.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7110.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D179.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4113.85
corpora quadrigemina, adult.CNhs10501.16-22A4650.09
corpus striatum, adult.CNhs10487.19-21D8457.04
corpus striatum, neonate N00.CNhs11226.630-43F1231.46
cortex, adult.CNhs10473.12-14D5646.97
cortex, neonate N30.CNhs11107.1392-42F2588.91
diencephalon, adult.CNhs10482.20-12F2572.25
diencephalon, neonate N30.CNhs11201.1388-42B2513.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B172.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A293.43
epididymis, adult.CNhs10490.58-23B2215.07
eyeball, adult.CNhs10484.31-12G4200.34
eyeball, embryo E12.CNhs11016.345-16C671.57
eyeball, embryo E14.CNhs10521.399-16E278.40
eyeball, embryo E15.CNhs10593.426-16C999.93
eyeball, embryo E17.CNhs11023.1261-18D499.47
eyeball, neonate N00.CNhs11207.633-15C6139.54
eyeball, neonate N01.CNhs11140.1532-43E7129.01
eyeball, neonate N02.CNhs11205.1551-44G8123.12
eyeball, neonate N16.CNhs11188.777-19A2199.72
forelimb, embryo E11.CNhs10596.335-25E293.34
forelimb, embryo E12.CNhs10600.359-14H270.35
forelimb, embryo E13.CNhs10589.384-1E266.69
forelimb, embryo E14.CNhs10577.413-26A868.61
forelimb, embryo E15.CNhs11007.437-20E769.51
forelimb, embryo E17.CNhs10598.1517-43C457.11
forelimb, embryo E18.CNhs11008.1520-43B550.01
gonad, embryo E13.CNhs11044.1564-45I657.32
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8127.10
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2137.42
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5132.42
heart, embryo E11.CNhs10586.331-24E9105.22
heart, embryo E12.CNhs11015.353-12F5101.78
heart, embryo E13.CNhs11013.376-3I988.41
heart, embryo E14.CNhs10597.403-26D4109.14
heart, embryo E15.CNhs11017.431-16C8100.94
heart, embryo E16.CNhs11021.457-17C692.71
heart, embryo E17.CNhs11025.479-18E586.74
heart, embryo E18.CNhs11030.1283-20G382.90
heart, neonate N00.CNhs11213.639-21E380.10
heart, neonate N03.CNhs11221.1349-25I278.50
heart, neonate N10.CNhs11118.749-24G181.10
heart, neonate N16.CNhs11209.782-15G169.72
heart, neonate N20.CNhs11127.821-26I669.59
heart, neonate N25.CNhs11196.1351-25D370.26
heart, neonate N30.CNhs11202.1390-42D273.14
hippocampus, adult.CNhs10478.13-16E8525.30
hippocampus, neonate N00.CNhs11228.627-43G1252.12
intestinal mucosa, adult.CNhs10506.860-29I348.24
intestine, adult.CNhs10496.178-9A362.67
intestine, embryo E12.CNhs11019.1251-16I573.58
intestine, embryo E13.CNhs11010.381-16D572.69
intestine, embryo E15.CNhs10602.976-16D873.20
intestine, embryo E16.CNhs10585.463-22H488.74
intestine, embryo E17.CNhs10582.482-18D384.06
intestine, embryo E18.CNhs10526.1289-20F789.79
intestine, neonate N00.CNhs11126.644-26D159.79
intestine, neonate N01.CNhs11192.1322-23E975.10
intestine, neonate N06.CNhs11102.688-20B869.87
intestine, neonate N07.CNhs11095.720-20F280.58
intestine, neonate N10.CNhs11098.755-23A568.43
intestine, neonate N20.CNhs11187.827-18D165.61
intestine, neonate N25.CNhs11121.1352-25E358.14
intestine, neonate N30.CNhs11131.1384-42G154.96
kidney, embryo E14.CNhs10606.411-4I988.57
kidney, embryo E15.CNhs10997.434-16F873.58
kidney, embryo E16.CNhs10584.464-22A599.18
kidney, embryo E17.CNhs11028.483-18I282.89
kidney, embryo E18.CNhs11001.1288-20C780.88
kidney, neonate N00.CNhs11214.646-21G789.07
kidney, neonate N10.CNhs11206.758-6D5119.14
kidney, neonate N20.CNhs11113.832-19I1137.13
kidney, neonate N25.CNhs11122.1353-25F3137.53
kidney, neonate N30.CNhs11203.1385-42H1143.26
liver, adult pregnant day01.CNhs10466.508-5B282.41
liver, embryo E12.CNhs10601.355-15F8104.61
liver, embryo E13.CNhs10524.378-3H6116.17
liver, embryo E14.CNhs10594.409-16E1112.88
liver, embryo E15.CNhs10520.433-16D7119.89
liver, embryo E16.CNhs10523.462-17F5111.67
liver, embryo E17.CNhs10510.481-18A399.05
liver, embryo E18.CNhs10579.499-43G4111.05
liver, neonate N00.CNhs11117.641-24F487.23
liver, neonate N03.CNhs11123.1345-25G286.76
liver, neonate N06.CNhs11101.684-20A8100.64
liver, neonate N07.CNhs11103.716-20H2103.83
liver, neonate N10.CNhs11115.751-24B986.43
liver, neonate N20.CNhs11220.823-25A388.66
liver, neonate N25.CNhs11198.1368-26H196.52
liver, neonate N30.CNhs11106.1382-42D191.66
lung, adult.CNhs10474.28-22B1118.80
lung, embryo E12.CNhs10522.354-16G270.87
lung, embryo E14.CNhs10604.404-26F879.85
lung, embryo E15.CNhs11020.432-17C571.29
lung, embryo E16.CNhs10998.458-17B677.45
lung, embryo E17.CNhs10605.480-44A685.60
lung, embryo E18.CNhs10583.1287-20I692.60
lung, neonate N00.CNhs11224.640-42C671.61
lung, neonate N06.CNhs11212.683-20E586.23
lung, neonate N07.CNhs11111.715-19A387.92
lung, neonate N10.CNhs11219.750-23E680.84
lung, neonate N20.CNhs11109.822-18A491.11
lung, neonate N25.CNhs11119.1359-25C783.06
lung, neonate N30.CNhs11133.1394-42H297.64
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A191.98
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1112.04
mammary gland, adult lactating day02.CNhs10480.595-22B6193.76
mammary gland, adult pregnant day19.CNhs10476.588-5H2109.00
medulla oblongata, adult.CNhs10477.17-12C2678.49
medulla oblongata, neonate N30.CNhs11200.1396-42A3589.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C246.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E182.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E290.97
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3114.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D763.57
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D961.99
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D479.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D597.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D699.61
olfactory brain, adult.CNhs10489.18-22I9349.60
ovary, adult.CNhs10507.91-2I769.69
ovary, embryo E18.CNhs11040.505-44H782.80
ovary, neonate N00.CNhs11217.1299-22I466.29
oviduct, adult pregnant day01.CNhs10500.988-6G672.42
pancreas, adult.CNhs10486.34-16E4100.89
pancreas, embryo E14.CNhs11012.405-44F491.04
pancreas, embryo E15.CNhs11042.1556-45F291.30
pancreas, embryo E16.CNhs11003.460-26E593.36
pancreas, embryo E17.CNhs10599.1558-45G3101.29
pancreas, embryo E18.CNhs10580.1535-43I781.16
pancreas, neonate N00.CNhs11105.645-26G959.70
pancreas, neonate N01.CNhs11138.1531-43D776.34
pancreas, neonate N02.CNhs11139.1539-43D874.51
pancreas, neonate N16.CNhs11136.787-43B671.74
pancreas, neonate N25.CNhs11094.1555-45E284.33
pancreas, neonate N30.CNhs11182.1548-44H585.60
pituitary gland, adult.CNhs10493.21-1G8124.26
pituitary gland, embryo E12.CNhs11018.346-16E690.21
pituitary gland, embryo E13.CNhs11009.370-44C7103.10
pituitary gland, embryo E14.CNhs11037.398-44A5109.74
pituitary gland, embryo E15.CNhs10592.427-16B9118.46
pituitary gland, embryo E16.CNhs11036.449-43F6117.72
pituitary gland, embryo E17.CNhs11039.1265-44F5125.55
pituitary gland, neonate N00.CNhs11190.1308-22E9111.43
placenta, adult pregnant day10.CNhs10472.539-13I752.57
placenta, adult pregnant day17.CNhs10464.577-18G381.34
prostate, adult.CNhs10470.859-1F8128.57
skin, adult.CNhs10492.30-1C345.01
skin, neonate N00.CNhs11124.650-25G456.19
skin, neonate N03.CNhs11215.662-22H365.50
skin, neonate N06.CNhs11097.693-20I587.38
skin, neonate N10.CNhs11108.762-6C484.53
small intestine, neonate N16.CNhs11114.790-21I159.46
spinal cord, adult.CNhs10505.24-13C9690.15
spleen, adult.CNhs10465.25-2G2104.57
spleen, embryo E16.CNhs11035.461-43C169.76
spleen, embryo E18.CNhs11011.1271-21F282.60
spleen, neonate N10.CNhs11116.752-24D196.07
spleen, neonate N20.CNhs11112.824-19H1106.07
spleen, neonate N25.CNhs11099.1354-25G387.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C689.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9102.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D391.63
stomach, adult.CNhs10503.33-1H682.10
stomach, embryo E12.CNhs10588.356-43E387.15
stomach, embryo E15.CNhs10603.1252-16G874.21
stomach, embryo E16.CNhs11022.459-17D459.08
stomach, embryo E17.CNhs11006.1035-18D556.24
stomach, embryo E18.CNhs10999.1286-20C662.45
stomach, neonate N03.CNhs11193.1340-24B863.25
stomach, neonate N07.CNhs11210.718-18A971.41
stomach, neonate N25.CNhs11104.1355-25E465.96
stomach, neonate N30.CNhs11134.1386-42I151.33
submandibular gland, adult.CNhs10469.59-29C1112.46
testis, adult.CNhs10504.57-7G584.55
testis, embryo E13.CNhs11031.389-23F564.14
testis, embryo E15.CNhs11034.443-27C559.73
testis, embryo E16.CNhs11033.470-26G565.72
testis, embryo E17.CNhs11029.486-18I568.58
testis, embryo E18.CNhs11027.503-18G581.77
testis, neonate N00.CNhs11189.1300-22B778.51
testis, neonate N07.CNhs11222.726-26I464.06
testis, neonate N10.CNhs11204.763-44D962.08
testis, neonate N20.CNhs11110.839-18H395.67
testis, neonate N30.CNhs11130.1391-42E276.33
thymus, adult.CNhs10471.38-12B5151.69
thymus, embryo E14.CNhs11041.402-44I4103.59
thymus, embryo E15.CNhs11005.430-45I286.38
thymus, embryo E16.CNhs11002.456-26C5102.51
thymus, embryo E17.CNhs10581.478-18C1148.06
thymus, embryo E18.CNhs10595.1273-19G4122.19
thymus, neonate N02.CNhs11181.1541-43F8105.17
thymus, neonate N03.CNhs11137.2104-43C7120.81
thymus, neonate N06.CNhs11197.681-26C4105.71
thymus, neonate N07.CNhs11211.713-19D3127.65
thymus, neonate N10.CNhs11194.748-24E4113.43
thymus, neonate N20.CNhs11186.820-7A2125.92
thymus, neonate N25.CNhs11125.1362-25G7112.38
thymus, neonate N30.CNhs11132.1393-42G2117.70
tongue, adult.CNhs10499.32-1B437.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H362.60
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G543.15
urinary bladder, adult.CNhs10481.879-12E474.38
uterus, adult pregnant day19.CNhs10497.590-15F538.29
uterus, adult.CNhs10509.92-27E540.84
vagina, adult.CNhs10502.89-27D525.51
vesicular gland, adult.CNhs10491.51-27F8102.32
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1939.75
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2808.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3881.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7692.74
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4672.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5648.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6650.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7608.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8624.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9665.84
whole body, embryo E11.CNhs11014.324-5I842.14
whole body, embryo E12.CNhs10587.857-27C9114.92
whole body, embryo E13.CNhs10512.372-23H293.90
whole body, embryo E14.5.CNhs10578.420-27D293.11
whole body, embryo E14.CNhs10519.395-14B161.63
whole body, embryo E16.CNhs10514.453-14F266.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G590.68
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G596.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5101.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G589.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5107.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G595.63
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G576.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G581.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G583.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G590.50
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G576.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G573.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G576.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G589.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G583.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G577.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G572.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G593.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G590.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G586.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G584.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G592.34
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G577.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5112.23
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G582.45
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G578.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G575.30
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G578.24
whole body, embryo E17.5.CNhs10513.490-9F986.04
whole body, embryo E17.CNhs10517.475-3I5150.14
whole body, embryo E18.CNhs10516.493-3B389.60
whole body, neonate N00.CNhs10525.657-19C2117.75
whole body, neonate N01.CNhs10576.659-23C688.18
whole body, neonate N06.CNhs10515.692-21D186.91
whole body, neonate N10.CNhs10518.761-6B474.89





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.02e-1323
neuroblast (sensu Vertebrata)8.02e-1323
ectodermal cell9.23e-0944
neurectodermal cell9.23e-0944
neural cell1.27e-0843
neuron1.80e-0833
neuronal stem cell1.80e-0833
neuroblast1.80e-0833
electrically signaling cell1.80e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.68e-2654
central nervous system4.32e-2673
neurectoderm5.42e-2564
neural plate5.42e-2564
presumptive neural plate5.42e-2564
neural tube1.11e-2452
neural rod1.11e-2452
future spinal cord1.11e-2452
neural keel1.11e-2452
nervous system6.87e-2475
ectoderm-derived structure3.53e-2295
ectoderm3.53e-2295
presumptive ectoderm3.53e-2295
ecto-epithelium1.09e-2173
brain1.67e-2147
future brain1.67e-2147
regional part of brain5.78e-2146
pre-chordal neural plate7.89e-1949
gray matter1.92e-1834
anterior neural tube2.74e-1840
regional part of forebrain1.27e-1739
forebrain1.27e-1739
future forebrain1.27e-1739
brain grey matter1.22e-1529
regional part of telencephalon1.22e-1529
telencephalon1.22e-1529
tube8.20e-14114
structure with developmental contribution from neural crest1.41e-1392
anatomical conduit7.63e-13122
cerebral cortex2.29e-1121
cerebral hemisphere2.29e-1121
pallium2.29e-1121
regional part of cerebral cortex1.19e-0917
epithelium5.40e-09174
cell layer6.67e-09176
occipital lobe6.22e-0810
visual cortex6.22e-0810
neocortex6.22e-0810
posterior neural tube5.57e-0712
chordal neural plate5.57e-0712
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