FFCP PHASE1:Mm9::chr4:110070315..110070368,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:110070315..110070368,+ to FFCP PHASE1:Mm9::chr4:110070315..110070368,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=78933 | |EntrezGene=78933 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=A2A9S6,A2A9S7,E4W7Y4 | |UniProt=A2A9S6,A2A9S7,E4W7Y4 | ||
|association_with_transcript=12bp_to_ENSMUST00000106587,ENSMUST00000106591,ENSMUST00000106592_5end | |||
|cluster_id=chr4:110070315..110070368,+ | |||
|description=CAGE_peak_1_at_Agbl4_5end | |||
|id=chr4:110070315..110070368,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.29e-09!23;CL:0000337!5.29e-09!23;CL:0000540!6.37e-07!33;CL:0000047!6.37e-07!33;CL:0000031!6.37e-07!33;CL:0000404!6.37e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-08,23;CL:0000337,2.78e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.51e-24!71;UBERON:0003075!3.51e-24!71;UBERON:0007284!3.51e-24!71;UBERON:0000033!3.76e-23!63;UBERON:0001017!7.92e-23!73;UBERON:0005743!7.92e-23!73;UBERON:0001049!5.37e-22!52;UBERON:0005068!5.37e-22!52;UBERON:0006241!5.37e-22!52;UBERON:0007135!5.37e-22!52;UBERON:0000073!2.90e-21!75;UBERON:0001016!2.90e-21!75;UBERON:0000955!3.27e-21!50;UBERON:0006238!3.27e-21!50;UBERON:0002616!1.36e-20!49;UBERON:0003056!3.03e-20!49;UBERON:0004121!2.73e-18!102;UBERON:0000924!2.73e-18!102;UBERON:0006601!2.73e-18!102;UBERON:0003080!2.58e-17!40;UBERON:0002780!1.40e-16!39;UBERON:0001890!1.40e-16!39;UBERON:0006240!1.40e-16!39;UBERON:0002020!5.34e-15!34;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0007811!5.98e-11!86;UBERON:0000025!6.67e-10!114;UBERON:0000153!8.21e-10!94;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0004111!2.09e-08!122;UBERON:0002619!4.13e-08!17;UBERON:0002021!6.35e-08!10;UBERON:0000411!6.35e-08!10;UBERON:0001950!6.35e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-24,54;UBERON:0002346,6.48e-23,64;UBERON:0003075,6.48e-23,64;UBERON:0007284,6.48e-23,64;UBERON:0001049,2.25e-22,52;UBERON:0005068,2.25e-22,52;UBERON:0006241,2.25e-22,52;UBERON:0007135,2.25e-22,52;UBERON:0001017,2.44e-22,73;UBERON:0001016,3.39e-21,75;UBERON:0010371,1.26e-19,73;UBERON:0004121,1.63e-19,95;UBERON:0000924,1.63e-19,95;UBERON:0006601,1.63e-19,95;UBERON:0003056,4.15e-19,49;UBERON:0010314,5.02e-19,92;UBERON:0000955,7.04e-19,47;UBERON:0006238,7.04e-19,47;UBERON:0002616,3.90e-18,46;UBERON:0003080,1.09e-16,40;UBERON:0002780,8.44e-16,39;UBERON:0001890,8.44e-16,39;UBERON:0006240,8.44e-16,39;UBERON:0002020,2.55e-14,34;UBERON:0003528,3.97e-11,29;UBERON:0002791,3.97e-11,29;UBERON:0001893,3.97e-11,29;UBERON:0000025,1.43e-10,114;UBERON:0002021,4.83e-10,10;UBERON:0000411,4.83e-10,10;UBERON:0001950,4.83e-10,10;UBERON:0004111,9.56e-10,122 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6390692990977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.777719596297134,1.25987779462826,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0,0,0,0.299600110518405,4.61061966385865,1.45165457231869,0.675029691658453,0.420649922702764,4.57041575046086,5.30084498283872,0.857435594504678,0.575072826109418,0.919218786610021,14.3150645299205,18.1316020080967,17.8183578577242,2.90149833006426,2.47016637726506,2.08365348222704,10.8881369610539,16.8828783009504,15.5854212732346,4.71405736757868,7.40332740155335,2.60959224155421,0,0,0.289864488701678,0,0,0,0,0,3.23022166303029,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0,2.52351636410202,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,4.09893115816166,3.77004072264219,0,0,0,0,27.2618963716777,16.9275223042892,2.01046963380583,25.0307021076878,20.9686675010871,15.9996794310861,16.5486088329113,0.611036183101898,0.746441823660558,0.758168275301024,0.841767423545896,0.650602214813519,1.83921683546778,2.16074555766419,2.56198190320716,5.10273743634959,2.94661556655154,2.06143794031403,2.84573707812917,0.215567992932842,0.378212160335639,0.703804496655795,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,1.03562886267751,0.938104239924385,1.08037236876609,1.18372367792605,2.16440654922144,2.31400669331067,1.86027155800326,1.07309360559848,1.5179494507732,1.48103864922132,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.402619256281115,15.9820360908737,2.98423375899925,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.799739588268102,1.1270773567308,1.22190796707189,0.969762435838129,0.631222379012867,1.20149420536089,1.18088118383682,1.09899109488962,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0.162964976442026,0.169745085775188,1.17345124144251,1.00503754465089,2.14239276797412,1.56106918286239,1.26108115284953,0.8858587585951,1.11618338060241,1.63863314715738,1.55416483679306,0.867894351489069,0,0,0,0,17.6605648986571,14.5342491374332,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0,0,0.566153061577665,0,1.16902343164525,0.395287777946524,11.2462460747632,2.41298144854057,0.178065603667255,0.488660878060728,3.79431282836832,0,1.45668381692989,0.906970670894253,0.943025398779491,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,20.7668159509811,1.8006109403131,1.03486947026204,3.21505552547388,6.7389288784064,3.21063871683727,5.26556865926787,0.608929898229199,0,0,0,0,0,0,0,0,0.582961673259701,12.6089205367147,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,163.470952218415,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.352071715937262,0.651021924219751,2.9360616439199,66.4356332271517,106.57110231541,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,14.1187960654267,10.1271552031579,18.9055519435001,11.3423100346834,23.9778881919725,19.6402413321322,24.9758325085768,22.0657389579868,27.1885445390523,21.7459330935764,0.31136204275253,1.59609949360412,1.53660245178721,1.70174701947806,0.209613162627982,0.367687016900028,2.00022055021454,2.26638562962784,0.64183841918363,2.02157769411038,1.2673964994512,1.32038438970253,1.31098110457835,2.11283002936069,1.49332219284595,2.38146845641537,1.85414921511769,1.54327376370964,1.23625770240992,1.47198920134397,1.02860775715625,1.4198064492747,1.1921809497366,2.18019624948493,1.12931256498397,1.52306294205018,1.64635175585495,2.10455769150274,1.35804113845862,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,1.39443157067369,1.15743966588685,2.49810577937946,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0 | |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6390692990977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.777719596297134,1.25987779462826,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0,0,0,0.299600110518405,4.61061966385865,1.45165457231869,0.675029691658453,0.420649922702764,4.57041575046086,5.30084498283872,0.857435594504678,0.575072826109418,0.919218786610021,14.3150645299205,18.1316020080967,17.8183578577242,2.90149833006426,2.47016637726506,2.08365348222704,10.8881369610539,16.8828783009504,15.5854212732346,4.71405736757868,7.40332740155335,2.60959224155421,0,0,0.289864488701678,0,0,0,0,0,3.23022166303029,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0,2.52351636410202,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,4.09893115816166,3.77004072264219,0,0,0,0,27.2618963716777,16.9275223042892,2.01046963380583,25.0307021076878,20.9686675010871,15.9996794310861,16.5486088329113,0.611036183101898,0.746441823660558,0.758168275301024,0.841767423545896,0.650602214813519,1.83921683546778,2.16074555766419,2.56198190320716,5.10273743634959,2.94661556655154,2.06143794031403,2.84573707812917,0.215567992932842,0.378212160335639,0.703804496655795,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,1.03562886267751,0.938104239924385,1.08037236876609,1.18372367792605,2.16440654922144,2.31400669331067,1.86027155800326,1.07309360559848,1.5179494507732,1.48103864922132,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.402619256281115,15.9820360908737,2.98423375899925,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.799739588268102,1.1270773567308,1.22190796707189,0.969762435838129,0.631222379012867,1.20149420536089,1.18088118383682,1.09899109488962,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0.162964976442026,0.169745085775188,1.17345124144251,1.00503754465089,2.14239276797412,1.56106918286239,1.26108115284953,0.8858587585951,1.11618338060241,1.63863314715738,1.55416483679306,0.867894351489069,0,0,0,0,17.6605648986571,14.5342491374332,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0,0,0.566153061577665,0,1.16902343164525,0.395287777946524,11.2462460747632,2.41298144854057,0.178065603667255,0.488660878060728,3.79431282836832,0,1.45668381692989,0.906970670894253,0.943025398779491,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,20.7668159509811,1.8006109403131,1.03486947026204,3.21505552547388,6.7389288784064,3.21063871683727,5.26556865926787,0.608929898229199,0,0,0,0,0,0,0,0,0.582961673259701,12.6089205367147,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,163.470952218415,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.352071715937262,0.651021924219751,2.9360616439199,66.4356332271517,106.57110231541,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,14.1187960654267,10.1271552031579,18.9055519435001,11.3423100346834,23.9778881919725,19.6402413321322,24.9758325085768,22.0657389579868,27.1885445390523,21.7459330935764,0.31136204275253,1.59609949360412,1.53660245178721,1.70174701947806,0.209613162627982,0.367687016900028,2.00022055021454,2.26638562962784,0.64183841918363,2.02157769411038,1.2673964994512,1.32038438970253,1.31098110457835,2.11283002936069,1.49332219284595,2.38146845641537,1.85414921511769,1.54327376370964,1.23625770240992,1.47198920134397,1.02860775715625,1.4198064492747,1.1921809497366,2.18019624948493,1.12931256498397,1.52306294205018,1.64635175585495,2.10455769150274,1.35804113845862,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,1.39443157067369,1.15743966588685,2.49810577937946,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0 | ||
|short_description=p1@Agbl4 | |||
}} | }} |
Latest revision as of 03:56, 26 September 2015
Short description: | p1@Agbl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Agbl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 12bp_to_ENSMUST00000106587, ENSMUST00000106591, ENSMUST00000106592_5end |
EntrezGene: | Agbl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.78e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.78e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.81e-24 | 54 |
neurectoderm | 6.48e-23 | 64 |
neural plate | 6.48e-23 | 64 |
presumptive neural plate | 6.48e-23 | 64 |
neural tube | 2.25e-22 | 52 |
neural rod | 2.25e-22 | 52 |
future spinal cord | 2.25e-22 | 52 |
neural keel | 2.25e-22 | 52 |
central nervous system | 2.44e-22 | 73 |
nervous system | 3.39e-21 | 75 |
ecto-epithelium | 1.26e-19 | 73 |
ectoderm-derived structure | 1.63e-19 | 95 |
ectoderm | 1.63e-19 | 95 |
presumptive ectoderm | 1.63e-19 | 95 |
pre-chordal neural plate | 4.15e-19 | 49 |
structure with developmental contribution from neural crest | 5.02e-19 | 92 |
brain | 7.04e-19 | 47 |
future brain | 7.04e-19 | 47 |
regional part of brain | 3.90e-18 | 46 |
anterior neural tube | 1.09e-16 | 40 |
regional part of forebrain | 8.44e-16 | 39 |
forebrain | 8.44e-16 | 39 |
future forebrain | 8.44e-16 | 39 |
gray matter | 2.55e-14 | 34 |
brain grey matter | 3.97e-11 | 29 |
regional part of telencephalon | 3.97e-11 | 29 |
telencephalon | 3.97e-11 | 29 |
tube | 1.43e-10 | 114 |
occipital lobe | 4.83e-10 | 10 |
visual cortex | 4.83e-10 | 10 |
neocortex | 4.83e-10 | 10 |
anatomical conduit | 9.56e-10 | 122 |