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FFCP PHASE1:Mm9::chr4:110070315..110070368,+: Difference between revisions

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{{FFCP|EntrezGene=78933|HGNC=|MCL_coexpression_id=0|UniProt=A2A9S6,A2A9S7,E4W7Y4|association_with_transcript=12bp_to_ENSMUST00000106587,ENSMUST00000106591,ENSMUST00000106592_5end|description=CAGE_peak_1_at_Agbl4_5end|id=chr4:110070315..110070368,+|ontology_enrichment_celltype=CL:0000117!5.29e-09!23;CL:0000337!5.29e-09!23;CL:0000540!6.37e-07!33;CL:0000047!6.37e-07!33;CL:0000031!6.37e-07!33;CL:0000404!6.37e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-08,23;CL:0000337,2.78e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.51e-24!71;UBERON:0003075!3.51e-24!71;UBERON:0007284!3.51e-24!71;UBERON:0000033!3.76e-23!63;UBERON:0001017!7.92e-23!73;UBERON:0005743!7.92e-23!73;UBERON:0001049!5.37e-22!52;UBERON:0005068!5.37e-22!52;UBERON:0006241!5.37e-22!52;UBERON:0007135!5.37e-22!52;UBERON:0000073!2.90e-21!75;UBERON:0001016!2.90e-21!75;UBERON:0000955!3.27e-21!50;UBERON:0006238!3.27e-21!50;UBERON:0002616!1.36e-20!49;UBERON:0003056!3.03e-20!49;UBERON:0004121!2.73e-18!102;UBERON:0000924!2.73e-18!102;UBERON:0006601!2.73e-18!102;UBERON:0003080!2.58e-17!40;UBERON:0002780!1.40e-16!39;UBERON:0001890!1.40e-16!39;UBERON:0006240!1.40e-16!39;UBERON:0002020!5.34e-15!34;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0007811!5.98e-11!86;UBERON:0000025!6.67e-10!114;UBERON:0000153!8.21e-10!94;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0004111!2.09e-08!122;UBERON:0002619!4.13e-08!17;UBERON:0002021!6.35e-08!10;UBERON:0000411!6.35e-08!10;UBERON:0001950!6.35e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-24,54;UBERON:0002346,6.48e-23,64;UBERON:0003075,6.48e-23,64;UBERON:0007284,6.48e-23,64;UBERON:0001049,2.25e-22,52;UBERON:0005068,2.25e-22,52;UBERON:0006241,2.25e-22,52;UBERON:0007135,2.25e-22,52;UBERON:0001017,2.44e-22,73;UBERON:0001016,3.39e-21,75;UBERON:0010371,1.26e-19,73;UBERON:0004121,1.63e-19,95;UBERON:0000924,1.63e-19,95;UBERON:0006601,1.63e-19,95;UBERON:0003056,4.15e-19,49;UBERON:0010314,5.02e-19,92;UBERON:0000955,7.04e-19,47;UBERON:0006238,7.04e-19,47;UBERON:0002616,3.90e-18,46;UBERON:0003080,1.09e-16,40;UBERON:0002780,8.44e-16,39;UBERON:0001890,8.44e-16,39;UBERON:0006240,8.44e-16,39;UBERON:0002020,2.55e-14,34;UBERON:0003528,3.97e-11,29;UBERON:0002791,3.97e-11,29;UBERON:0001893,3.97e-11,29;UBERON:0000025,1.43e-10,114;UBERON:0002021,4.83e-10,10;UBERON:0000411,4.83e-10,10;UBERON:0001950,4.83e-10,10;UBERON:0004111,9.56e-10,122|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6390692990977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.777719596297134,1.25987779462826,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0,0,0,0.299600110518405,4.61061966385865,1.45165457231869,0.675029691658453,0.420649922702764,4.57041575046086,5.30084498283872,0.857435594504678,0.575072826109418,0.919218786610021,14.3150645299205,18.1316020080967,17.8183578577242,2.90149833006426,2.47016637726506,2.08365348222704,10.8881369610539,16.8828783009504,15.5854212732346,4.71405736757868,7.40332740155335,2.60959224155421,0,0,0.289864488701678,0,0,0,0,0,3.23022166303029,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0,2.52351636410202,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,4.09893115816166,3.77004072264219,0,0,0,0,27.2618963716777,16.9275223042892,2.01046963380583,25.0307021076878,20.9686675010871,15.9996794310861,16.5486088329113,0.611036183101898,0.746441823660558,0.758168275301024,0.841767423545896,0.650602214813519,1.83921683546778,2.16074555766419,2.56198190320716,5.10273743634959,2.94661556655154,2.06143794031403,2.84573707812917,0.215567992932842,0.378212160335639,0.703804496655795,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,1.03562886267751,0.938104239924385,1.08037236876609,1.18372367792605,2.16440654922144,2.31400669331067,1.86027155800326,1.07309360559848,1.5179494507732,1.48103864922132,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.402619256281115,15.9820360908737,2.98423375899925,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.799739588268102,1.1270773567308,1.22190796707189,0.969762435838129,0.631222379012867,1.20149420536089,1.18088118383682,1.09899109488962,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0.162964976442026,0.169745085775188,1.17345124144251,1.00503754465089,2.14239276797412,1.56106918286239,1.26108115284953,0.8858587585951,1.11618338060241,1.63863314715738,1.55416483679306,0.867894351489069,0,0,0,0,17.6605648986571,14.5342491374332,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0,0,0.566153061577665,0,1.16902343164525,0.395287777946524,11.246246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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78933
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=A2A9S6,A2A9S7,E4W7Y4
|association_with_transcript=12bp_to_ENSMUST00000106587,ENSMUST00000106591,ENSMUST00000106592_5end
|cluster_id=chr4:110070315..110070368,+
|description=CAGE_peak_1_at_Agbl4_5end
|id=chr4:110070315..110070368,+
|ontology_enrichment_celltype=CL:0000117!5.29e-09!23;CL:0000337!5.29e-09!23;CL:0000540!6.37e-07!33;CL:0000047!6.37e-07!33;CL:0000031!6.37e-07!33;CL:0000404!6.37e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-08,23;CL:0000337,2.78e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.51e-24!71;UBERON:0003075!3.51e-24!71;UBERON:0007284!3.51e-24!71;UBERON:0000033!3.76e-23!63;UBERON:0001017!7.92e-23!73;UBERON:0005743!7.92e-23!73;UBERON:0001049!5.37e-22!52;UBERON:0005068!5.37e-22!52;UBERON:0006241!5.37e-22!52;UBERON:0007135!5.37e-22!52;UBERON:0000073!2.90e-21!75;UBERON:0001016!2.90e-21!75;UBERON:0000955!3.27e-21!50;UBERON:0006238!3.27e-21!50;UBERON:0002616!1.36e-20!49;UBERON:0003056!3.03e-20!49;UBERON:0004121!2.73e-18!102;UBERON:0000924!2.73e-18!102;UBERON:0006601!2.73e-18!102;UBERON:0003080!2.58e-17!40;UBERON:0002780!1.40e-16!39;UBERON:0001890!1.40e-16!39;UBERON:0006240!1.40e-16!39;UBERON:0002020!5.34e-15!34;UBERON:0002791!2.03e-12!29;UBERON:0003528!2.03e-12!29;UBERON:0001893!2.03e-12!29;UBERON:0007811!5.98e-11!86;UBERON:0000025!6.67e-10!114;UBERON:0000153!8.21e-10!94;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0004111!2.09e-08!122;UBERON:0002619!4.13e-08!17;UBERON:0002021!6.35e-08!10;UBERON:0000411!6.35e-08!10;UBERON:0001950!6.35e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-24,54;UBERON:0002346,6.48e-23,64;UBERON:0003075,6.48e-23,64;UBERON:0007284,6.48e-23,64;UBERON:0001049,2.25e-22,52;UBERON:0005068,2.25e-22,52;UBERON:0006241,2.25e-22,52;UBERON:0007135,2.25e-22,52;UBERON:0001017,2.44e-22,73;UBERON:0001016,3.39e-21,75;UBERON:0010371,1.26e-19,73;UBERON:0004121,1.63e-19,95;UBERON:0000924,1.63e-19,95;UBERON:0006601,1.63e-19,95;UBERON:0003056,4.15e-19,49;UBERON:0010314,5.02e-19,92;UBERON:0000955,7.04e-19,47;UBERON:0006238,7.04e-19,47;UBERON:0002616,3.90e-18,46;UBERON:0003080,1.09e-16,40;UBERON:0002780,8.44e-16,39;UBERON:0001890,8.44e-16,39;UBERON:0006240,8.44e-16,39;UBERON:0002020,2.55e-14,34;UBERON:0003528,3.97e-11,29;UBERON:0002791,3.97e-11,29;UBERON:0001893,3.97e-11,29;UBERON:0000025,1.43e-10,114;UBERON:0002021,4.83e-10,10;UBERON:0000411,4.83e-10,10;UBERON:0001950,4.83e-10,10;UBERON:0004111,9.56e-10,122
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6390692990977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,0.777719596297134,1.25987779462826,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,3.80298842103708,0,0,0,0,0,0.299600110518405,4.61061966385865,1.45165457231869,0.675029691658453,0.420649922702764,4.57041575046086,5.30084498283872,0.857435594504678,0.575072826109418,0.919218786610021,14.3150645299205,18.1316020080967,17.8183578577242,2.90149833006426,2.47016637726506,2.08365348222704,10.8881369610539,16.8828783009504,15.5854212732346,4.71405736757868,7.40332740155335,2.60959224155421,0,0,0.289864488701678,0,0,0,0,0,3.23022166303029,0,0,0,1.26759077799012,0,0,0,0.216491041011214,0.253359865475099,0,3.53970027129086,0,2.52351636410202,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.940709657085638,0.502666365318702,0,0,0,0,0,0,0,4.09893115816166,3.77004072264219,0,0,0,0,27.2618963716777,16.9275223042892,2.01046963380583,25.0307021076878,20.9686675010871,15.9996794310861,16.5486088329113,0.611036183101898,0.746441823660558,0.758168275301024,0.841767423545896,0.650602214813519,1.83921683546778,2.16074555766419,2.56198190320716,5.10273743634959,2.94661556655154,2.06143794031403,2.84573707812917,0.215567992932842,0.378212160335639,0.703804496655795,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,1.03562886267751,0.938104239924385,1.08037236876609,1.18372367792605,2.16440654922144,2.31400669331067,1.86027155800326,1.07309360559848,1.5179494507732,1.48103864922132,0.656669856316381,0.405344047729279,0.146199987425332,0.439100230582101,0.402619256281115,15.9820360908737,2.98423375899925,0,0,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.799739588268102,1.1270773567308,1.22190796707189,0.969762435838129,0.631222379012867,1.20149420536089,1.18088118383682,1.09899109488962,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0.162964976442026,0.169745085775188,1.17345124144251,1.00503754465089,2.14239276797412,1.56106918286239,1.26108115284953,0.8858587585951,1.11618338060241,1.63863314715738,1.55416483679306,0.867894351489069,0,0,0,0,17.6605648986571,14.5342491374332,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0,0,0.566153061577665,0,1.16902343164525,0.395287777946524,11.2462460747632,2.41298144854057,0.178065603667255,0.488660878060728,3.79431282836832,0,1.45668381692989,0.906970670894253,0.943025398779491,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,20.7668159509811,1.8006109403131,1.03486947026204,3.21505552547388,6.7389288784064,3.21063871683727,5.26556865926787,0.608929898229199,0,0,0,0,0,0,0,0,0.582961673259701,12.6089205367147,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,163.470952218415,0.598066184175915,0.165458490457098,0.583353565032143,0.516639293910924,0.337912250981556,0.352071715937262,0.651021924219751,2.9360616439199,66.4356332271517,106.57110231541,0,0.405450430580328,0,0.129920822977795,0,0.198681354781265,0,0.443068581523732,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,14.1187960654267,10.1271552031579,18.9055519435001,11.3423100346834,23.9778881919725,19.6402413321322,24.9758325085768,22.0657389579868,27.1885445390523,21.7459330935764,0.31136204275253,1.59609949360412,1.53660245178721,1.70174701947806,0.209613162627982,0.367687016900028,2.00022055021454,2.26638562962784,0.64183841918363,2.02157769411038,1.2673964994512,1.32038438970253,1.31098110457835,2.11283002936069,1.49332219284595,2.38146845641537,1.85414921511769,1.54327376370964,1.23625770240992,1.47198920134397,1.02860775715625,1.4198064492747,1.1921809497366,2.18019624948493,1.12931256498397,1.52306294205018,1.64635175585495,2.10455769150274,1.35804113845862,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,1.39443157067369,1.15743966588685,2.49810577937946,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0
|short_description=p1@Agbl4
}}

Latest revision as of 03:56, 26 September 2015

Short description:p1@Agbl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Agbl4_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 12bp_to_ENSMUST00000106587, ENSMUST00000106591, ENSMUST00000106592_5end
EntrezGene:Agbl4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Agbl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A427.26
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D525.03
cortex, neonate N30.CNhs11107.1392-42F220.97
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.66
medulla oblongata, neonate N30.CNhs11200.1396-42A314.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G820.77
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5163.47
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H366.44
testis, neonate N30.CNhs11130.1391-42E2106.57
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A827.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.78e-0823
neuroblast (sensu Vertebrata)2.78e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.81e-2454
neurectoderm6.48e-2364
neural plate6.48e-2364
presumptive neural plate6.48e-2364
neural tube2.25e-2252
neural rod2.25e-2252
future spinal cord2.25e-2252
neural keel2.25e-2252
central nervous system2.44e-2273
nervous system3.39e-2175
ecto-epithelium1.26e-1973
ectoderm-derived structure1.63e-1995
ectoderm1.63e-1995
presumptive ectoderm1.63e-1995
pre-chordal neural plate4.15e-1949
structure with developmental contribution from neural crest5.02e-1992
brain7.04e-1947
future brain7.04e-1947
regional part of brain3.90e-1846
anterior neural tube1.09e-1640
regional part of forebrain8.44e-1639
forebrain8.44e-1639
future forebrain8.44e-1639
gray matter2.55e-1434
brain grey matter3.97e-1129
regional part of telencephalon3.97e-1129
telencephalon3.97e-1129
tube1.43e-10114
occipital lobe4.83e-1010
visual cortex4.83e-1010
neocortex4.83e-1010
anatomical conduit9.56e-10122
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