FFCP PHASE1:Mm9::chr9:107877983..107877991,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74153 | |EntrezGene=74153 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBK7 | |UniProt=Q9DBK7 | ||
|association_with_transcript=85bp_to_ENSMUST00000035216,NM_023738,uc009rno.1,uc009rnp.1,uc012han.1_5end | |association_with_transcript=85bp_to_ENSMUST00000035216,NM_023738,uc009rno.1,uc009rnp.1,uc012han.1_5end | ||
|cluster_id=chr9:107877983..107877991,+ | |||
|description=CAGE_peak_8_at_Uba7_5end | |description=CAGE_peak_8_at_Uba7_5end | ||
|id=chr9:107877983..107877991,+ | |id=chr9:107877983..107877991,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.97e-16,13;CL:0002194,6.32e-14,4;CL:0000766,6.32e-14,4;CL:0000234,6.32e-14,4;CL:0000576,6.32e-14,4;CL:0000235,6.32e-14,4;CL:0000864,6.32e-14,4;CL:0002009,6.32e-14,4;CL:0000040,6.32e-14,4;CL:0000559,6.32e-14,4;CL:0000763,4.77e-13,16;CL:0002476,4.84e-13,2;CL:0002031,5.93e-11,25;CL:0000049,6.19e-11,19;CL:0000764,4.94e-09,3;CL:0000765,4.94e-09,3;CL:0000038,4.94e-09,3;CL:0000547,4.94e-09,3;CL:0002293,8.49e-09,3;CL:0000988,2.00e-08,32;CL:0002032,2.00e-08,32;CL:0000037,2.00e-08,32;CL:0000837,2.00e-08,32;CL:0000473,3.43e-08,7;CL:0000557,3.43e-08,7;CL:0000219,8.08e-08,54;CL:0000213,1.38e-07,1;CL:0002078,1.38e-07,1;CL:0000115,1.38e-07,1;CL:0002262,1.38e-07,1;CL:1000398,1.38e-07,1;CL:0002320,1.97e-07,46;CL:0000134,1.97e-07,46;CL:0000815,8.26e-07,1;CL:0000792,8.26e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.94e-09,3;DOID:0060083,4.94e-09,3;DOID:1240,4.94e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.14e-11!48;UBERON:0002390!2.38e-10!45;UBERON:0003061!2.38e-10!45;UBERON:0002405!2.23e-08!70;UBERON:0004177!4.97e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.38e-07,1;UBERON:0001281,1.38e-07,1;UBERON:0000353,1.38e-07,1;UBERON:0003497,1.38e-07,1;UBERON:0003909,1.38e-07,1;UBERON:0003928,1.38e-07,1;UBERON:0003835,1.38e-07,1;UBERON:0003513,1.38e-07,1;UBERON:0001280,1.38e-07,1;UBERON:0004647,1.38e-07,1;UBERON:0002294,1.38e-07,1;UBERON:0001173,1.38e-07,1;UBERON:0004912,1.38e-07,1;UBERON:0005171,1.38e-07,1;UBERON:0002384,1.97e-07,46 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,1.03298658753261,0,0.234064526321993,0,0,0.513602189793617,0.961624426608971,0.666219523631325,1.21485160433896,0,0.157731082679119,0.411343300817216,0.84877930359606,0.255129870453209,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0.665191531965914,0,1.23012957516914,15.8481681015439,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.405507724878058,0,0.782391344348039,0,0,0.58328969722285,1.1198913730029,0,0.335565212115473,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,1.15265491596466,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0,3.18850937571846,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0.470354828542819,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0.292780797011547,0,0,0.838705871541442,0,0.762421362438388,0.299581278809645,0.457500602818626,0,0.347648640384553,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.204109497453984,0.384341160854549,0.0937017245597288,0,0,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.492502392237286,0.0810688095458557,0,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.561086559122548,0.0632365371242573,0.147610147979602,0.470996183524124,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.972811360650212,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0.476087281772027,0.390267295715598,0,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,3.01582567878545,2.71952841909355,0.491764273019036,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0.322928853391811,0.120625849856312,0.119372344003136,0,0,0,0.512612642393558,0.206386867963223,0.925972636848558,0.376736914009382,0.410082683163076,1.14389086603261,3.0596117398894,2.93898049879682,3.04039942369732,0,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0.632022241256357,0,0.410843828659309,0.389762468933385,0.358053391334963,0.198681354781265,0.480781798079875,0.443068581523732,0.201932899896295,0.381034033274999,0.504130925684203,0.292373642219257,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,1.03298658753261,0,0.234064526321993,0,0,0.513602189793617,0.961624426608971,0.666219523631325,1.21485160433896,0,0.157731082679119,0.411343300817216,0.84877930359606,0.255129870453209,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0.665191531965914,0,1.23012957516914,15.8481681015439,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0.125896817975577,0.405507724878058,0,0.782391344348039,0,0,0.58328969722285,1.1198913730029,0,0.335565212115473,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,1.15265491596466,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0,3.18850937571846,0.860423876981386,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0.470354828542819,0.125666591329675,0,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0.292780797011547,0,0,0.838705871541442,0,0.762421362438388,0.299581278809645,0.457500602818626,0,0.347648640384553,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0.204109497453984,0.384341160854549,0.0937017245597288,0,0,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.492502392237286,0.0810688095458557,0,0.439100230582101,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.561086559122548,0.0632365371242573,0.147610147979602,0.470996183524124,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.972811360650212,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0,0,0,0,0.476087281772027,0.390267295715598,0,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0.289298117163023,3.01582567878545,2.71952841909355,0.491764273019036,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0,0.322928853391811,0.120625849856312,0.119372344003136,0,0,0,0.512612642393558,0.206386867963223,0.925972636848558,0.376736914009382,0.410082683163076,1.14389086603261,3.0596117398894,2.93898049879682,3.04039942369732,0,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0.632022241256357,0,0.410843828659309,0.389762468933385,0.358053391334963,0.198681354781265,0.480781798079875,0.443068581523732,0.201932899896295,0.381034033274999,0.504130925684203,0.292373642219257,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0.859484216193193,0,0.220591419119515,0.231867835620421 | ||
|short_description=p8@Uba7 | |short_description=p8@Uba7 | ||
}} | }} |
Latest revision as of 03:54, 26 September 2015
Short description: | p8@Uba7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Uba7_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 85bp_to_ENSMUST00000035216, NM_023738, uc009rno.1, uc009rnp.1, uc012han.1_5end |
EntrezGene: | Uba7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bile duct | 1.38e-07 | 1 |
hepatic sinusoid | 1.38e-07 | 1 |
parenchyma | 1.38e-07 | 1 |
abdomen blood vessel | 1.38e-07 | 1 |
sinusoid | 1.38e-07 | 1 |
digestive system duct | 1.38e-07 | 1 |
abdominal segment blood vessel | 1.38e-07 | 1 |
trunk blood vessel | 1.38e-07 | 1 |
liver parenchyma | 1.38e-07 | 1 |
liver lobule | 1.38e-07 | 1 |
biliary system | 1.38e-07 | 1 |
biliary tree | 1.38e-07 | 1 |
biliary bud | 1.38e-07 | 1 |
hepatic duct | 1.38e-07 | 1 |
connective tissue | 1.97e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.94e-09 | 3 |
immune system cancer | 4.94e-09 | 3 |
leukemia | 4.94e-09 | 3 |