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FFCP PHASE1:Mm9::chr17:27760324..27760335,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:27760324..27760335,-
|DHSsupport=NA
|short_description=p4@Nudt3
|DPIdataset=NA
|description=CAGE_peak_4_at_Nudt3_5end
|association_with_transcript=61bp_to_NM_019837,uc008bpg.1_5end
|EntrezGene=56409
|EntrezGene=56409
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q9JI46
|UniProt=Q9JI46
|association_with_transcript=61bp_to_NM_019837,uc008bpg.1_5end
|cluster_id=chr17:27760324..27760335,-
|description=CAGE_peak_4_at_Nudt3_5end
|id=chr17:27760324..27760335,-
|ontology_enrichment_celltype=CL:0000221!1.27e-15!44;CL:0000133!1.27e-15!44;CL:0002319!3.24e-15!43;CL:0000117!1.07e-12!23;CL:0000337!1.07e-12!23;CL:0000055!1.41e-12!50;CL:0000540!2.21e-12!33;CL:0000047!2.21e-12!33;CL:0000031!2.21e-12!33;CL:0000404!2.21e-12!33;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.38e-17,44;CL:0000133,3.38e-17,44;CL:0002319,1.08e-16,43;CL:0000117,1.19e-15,23;CL:0000337,1.19e-15,23;CL:0000540,2.41e-13,33;CL:0000047,2.41e-13,33;CL:0000031,2.41e-13,33;CL:0000404,2.41e-13,33;CL:0000393,5.66e-11,39;CL:0000211,5.66e-11,39;CL:0002321,1.80e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.52e-27!75;UBERON:0001016!3.52e-27!75;UBERON:0001017!1.82e-26!73;UBERON:0005743!1.82e-26!73;UBERON:0004121!3.13e-21!102;UBERON:0000924!3.13e-21!102;UBERON:0006601!3.13e-21!102;UBERON:0001049!3.66e-21!52;UBERON:0005068!3.66e-21!52;UBERON:0006241!3.66e-21!52;UBERON:0007135!3.66e-21!52;UBERON:0002020!3.23e-20!34;UBERON:0000955!5.36e-20!50;UBERON:0006238!5.36e-20!50;UBERON:0002616!1.68e-19!49;UBERON:0000033!4.66e-18!63;UBERON:0002346!1.05e-17!71;UBERON:0003075!1.05e-17!71;UBERON:0007284!1.05e-17!71;UBERON:0002791!2.49e-17!29;UBERON:0003528!2.49e-17!29;UBERON:0001893!2.49e-17!29;UBERON:0007811!1.04e-15!86;UBERON:0003080!2.96e-15!40;UBERON:0000153!6.21e-15!94;UBERON:0002780!9.34e-15!39;UBERON:0001890!9.34e-15!39;UBERON:0006240!9.34e-15!39;UBERON:0003056!2.21e-14!49;UBERON:0000956!5.11e-13!21;UBERON:0001869!5.11e-13!21;UBERON:0000203!5.11e-13!21;UBERON:0002619!4.04e-11!17;UBERON:0002021!3.89e-08!10;UBERON:0000411!3.89e-08!10;UBERON:0001950!3.89e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.28e-30,75;UBERON:0001017,3.32e-29,73;UBERON:0000073,2.08e-26,54;UBERON:0002020,3.50e-25,34;UBERON:0001049,9.34e-25,52;UBERON:0005068,9.34e-25,52;UBERON:0006241,9.34e-25,52;UBERON:0007135,9.34e-25,52;UBERON:0004121,9.06e-24,95;UBERON:0000924,9.06e-24,95;UBERON:0006601,9.06e-24,95;UBERON:0002346,1.23e-22,64;UBERON:0003075,1.23e-22,64;UBERON:0007284,1.23e-22,64;UBERON:0003528,1.60e-21,29;UBERON:0002791,1.60e-21,29;UBERON:0001893,1.60e-21,29;UBERON:0000955,3.33e-21,47;UBERON:0006238,3.33e-21,47;UBERON:0002616,1.35e-20,46;UBERON:0010371,9.13e-19,73;UBERON:0010314,6.80e-18,92;UBERON:0003080,2.23e-17,40;UBERON:0002780,9.30e-17,39;UBERON:0001890,9.30e-17,39;UBERON:0006240,9.30e-17,39;UBERON:0000956,4.64e-16,21;UBERON:0001869,4.64e-16,21;UBERON:0000203,4.64e-16,21;UBERON:0003056,1.19e-15,49;UBERON:0002619,1.17e-13,17;UBERON:0002021,6.95e-10,10;UBERON:0000411,6.95e-10,10;UBERON:0001950,6.95e-10,10;UBERON:0003076,4.94e-08,12;UBERON:0003057,4.94e-08,12;UBERON:0000025,1.31e-07,114
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|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0.16787927191189,0,0.516493293766305,4.36445038670167,4.68129052643987,3.5955773327356,2.87179772383211,0.342401459862411,0.174840804837995,0.333109761815663,0.404950534779652,0,0.315462165358238,0.274228867211478,1.27316895539409,1.61582251287033,1.19149141441062,0.783599367416806,0.319984845586813,0.68822784320151,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.503587271902309,0.709638518536602,1.65192076945513,3.12956537739216,3.05235218932625,3.51497892375155,2.13872888981712,0.55994568650145,1.43752564364972,0,0.725362142011344,0,0.771778308107841,1.14613375975503,0,5.26022798234954,4.7609188134483,4.43681982454325,1.69422266034566,1.77858959222228,1.7997994345628,0,1.4209602298922,2.99600110518405,4.2264013585371,2.7996195323289,3.10513658162888,3.78584930432488,9.42648248532552,6.62605622854841,4.28717797252339,3.64212789869298,2.75765635983006,6.60695285996332,5.2351808614927,3.07213066512487,5.40733779693795,7.31901148819277,4.68822033501084,2.79182999001381,3.93933827022176,3.20876320331301,2.35702868378934,4.9830088279686,8.01517617048792,2.12033341332915,1.66257432234928,0,0,0,0,0,0,0.280888840263504,1.02258193546835,1.03914401841148,0.70667914902068,2.81686839553361,0,5.09610479413291,7.11066703153331,0.432982082022428,0.253359865475099,1.51657333504435,0.22836775943812,0.258937883647172,0.890652834388949,0.693941307064543,0.608930956624282,0.691846491768175,0.753613202763113,0.117588707135705,0.628332956648377,0.247194967734374,0.144599356919912,0,2.26473589926373,0.441683036920787,1.45462575940567,0,1.75668478206928,3.77004072264219,0.255457055208591,0.359445373517761,1.79970819298022,0.762421362438388,3.74476598512057,8.6925114535539,6.03140890141749,13.0368240144207,16.8772201838018,3.94797284663164,5.67844420737152,0.81471491080253,0.373220911830279,0.758168275301024,0.210441855886474,1.43132487258974,0.459804208866946,1.98068342785884,1.50704817835715,1.56483948048054,0.768682321709099,1.3118241438362,0.776110112217047,0.862271971731369,1.70195472151037,0.527853372491847,0.657587197282725,1.11218899690239,0.348252166522167,1.4404749548556,0.398068533636986,1.40442637462647,0.257347907114715,1.13665399758237,0.621377317606506,0.469052119962192,0.540186184383045,1.42046841351126,0.983821158737019,1.85120535464854,2.32533944750408,0.804820204198858,1.5179494507732,2.79751744852917,2.46251196118643,1.86458261955468,2.04679982395465,1.09775057645525,2.14730270016595,7.99101804543684,3.2929475961371,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.779856348476481,0,0.216138049874694,0.199141273254367,0.948339504765408,0.456994050438915,0,0.407302655690628,0.387904974335251,0.911765658574141,0.69560190836683,0,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0.482443521363367,0.739012760666419,1.13694847062291,1.14075483509418,1.35796068620151,0.234690248288502,0,0.238043640886014,0.585400943573396,0.157635144106191,0.44292937929755,0.956728611944923,0.81931657357869,0.172684981865896,0.578596234326046,1.50791283939272,0,0.983528546038072,0.275936746304732,3.21101179975584,2.93029216480508,0.983609672260053,0.504941854408746,2.83957397474631,0.390438744296638,1.07711698866399,0.955875191810208,1.33679204449436,1.69845918473299,0.809621403349789,1.46127928955656,3.16230222357219,3.21321316421807,0.709700426041343,1.06839362200353,0.488660878060728,0.824850614862677,0,0.728341908464944,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0.905510786479282,1.28602221018955,1.06404140185364,0.891844088010353,0.329098041204242,0.304464949114599,0.469343416127421,0.21183207086382,0.441056796109924,0.98931751764888,1.13025098687134,0.422190474497091,0.596861720015682,0.328281799490123,0,2.59595422814714,0,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0,1.35982743995084,0.559805809294632,1.24379976423981,0,0.949007980743406,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.41326727862668,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,1.48912641411388,1.55560950675238,0.645799117388655,0.675824501963113,1.76035857968631,1.43224823328345,2.09718688851422,1.44950472495604,1.15212002503146,0.316011120628178,0.810900861160657,1.54066435747241,0.51968329191118,0.895133478337407,0.596044064343795,0.841368146639782,0.738447635872886,0.201932899896295,0.762068066549998,0.907435666231565,0.38983152295901,0.865906574762965,0.233753804363138,0,0,0.448569283047378,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,10.1655331671072,14.7304075682297,9.73922372846974,9.45192502890282,26.718218271055,18.8848474347425,27.0009000092722,10.3573876741571,15.8599843144472,13.4617681055473,1.66059756134683,3.19219898720825,2.04880326904961,1.45864030240976,1.04806581313991,1.65459157605013,1.55572709461131,0.618105171716683,1.28367683836726,1.51618327058278,1.01391719956096,1.32038438970253,1.96647165686753,0.89635213366817,1.20614484806788,0.476293691283074,1.85414921511769,0.77163688185482,1.23625770240992,1.32479028120958,1.02860775715625,0.887379030796687,1.90748951957857,1.74415699958794,1.88218760830661,1.4384483341585,1.09756783723664,0.526139422875686,0.679020569229309,1.68342681497322,1.30498519936592,1.0835493061312,1.22769312950907,1.08455788830176,1.15743966588685,3.2475375131933,1.40358965067245,1.07435527024149,0.765153328275374,1.10295709559758,1.39120701372253
|short_description=p4@Nudt3
}}
}}

Latest revision as of 03:44, 26 September 2015

Short description:p4@Nudt3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nudt3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 61bp_to_NM_019837, uc008bpg.1_5end
EntrezGene:Nudt3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nudt3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.38e-1744
neurectodermal cell3.38e-1744
neural cell1.08e-1643
CNS neuron (sensu Vertebrata)1.19e-1523
neuroblast (sensu Vertebrata)1.19e-1523
neuron2.41e-1333
neuronal stem cell2.41e-1333
neuroblast2.41e-1333
electrically signaling cell2.41e-1333
electrically responsive cell5.66e-1139
electrically active cell5.66e-1139
embryonic cell1.80e-0870

Uber anatomy
Ontology termp-valuen
nervous system4.28e-3075
central nervous system3.32e-2973
regional part of nervous system2.08e-2654
gray matter3.50e-2534
neural tube9.34e-2552
neural rod9.34e-2552
future spinal cord9.34e-2552
neural keel9.34e-2552
ectoderm-derived structure9.06e-2495
ectoderm9.06e-2495
presumptive ectoderm9.06e-2495
neurectoderm1.23e-2264
neural plate1.23e-2264
presumptive neural plate1.23e-2264
brain grey matter1.60e-2129
regional part of telencephalon1.60e-2129
telencephalon1.60e-2129
brain3.33e-2147
future brain3.33e-2147
regional part of brain1.35e-2046
ecto-epithelium9.13e-1973
structure with developmental contribution from neural crest6.80e-1892
anterior neural tube2.23e-1740
regional part of forebrain9.30e-1739
forebrain9.30e-1739
future forebrain9.30e-1739
cerebral cortex4.64e-1621
cerebral hemisphere4.64e-1621
pallium4.64e-1621
pre-chordal neural plate1.19e-1549
regional part of cerebral cortex1.17e-1317
occipital lobe6.95e-1010
visual cortex6.95e-1010
neocortex6.95e-1010
posterior neural tube4.94e-0812
chordal neural plate4.94e-0812
tube1.31e-07114
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