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FFCP PHASE1:Mm9::chr4:109149271..109149332,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:109149271..109149332,-
|DHSsupport=NA
|short_description=p2@Rnf11
|DPIdataset=NA
|description=CAGE_peak_2_at_Rnf11_5end
|association_with_transcript=0bp_to_ENSMUST00000030284_5end
|EntrezGene=29864
|EntrezGene=29864
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QYK7
|UniProt=Q9QYK7
|association_with_transcript=0bp_to_ENSMUST00000030284_5end
|cluster_id=chr4:109149271..109149332,-
|description=CAGE_peak_2_at_Rnf11_5end
|id=chr4:109149271..109149332,-
|ontology_enrichment_celltype=CL:0000117!2.00e-12!23;CL:0000337!2.00e-12!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-12,23;CL:0000337,2.00e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!2.73e-21!122;UBERON:0001049!4.30e-20!52;UBERON:0005068!4.30e-20!52;UBERON:0006241!4.30e-20!52;UBERON:0007135!4.30e-20!52;UBERON:0000025!3.25e-19!114;UBERON:0002020!3.93e-19!34;UBERON:0000955!3.98e-19!50;UBERON:0006238!3.98e-19!50;UBERON:0002616!1.25e-18!49;UBERON:0001017!2.85e-17!73;UBERON:0005743!2.85e-17!73;UBERON:0000073!1.24e-16!75;UBERON:0001016!1.24e-16!75;UBERON:0002791!3.24e-16!29;UBERON:0003528!3.24e-16!29;UBERON:0001893!3.24e-16!29;UBERON:0003080!5.85e-15!40;UBERON:0000033!7.66e-15!63;UBERON:0002780!2.26e-14!39;UBERON:0001890!2.26e-14!39;UBERON:0006240!2.26e-14!39;UBERON:0002346!4.93e-14!71;UBERON:0003075!4.93e-14!71;UBERON:0007284!4.93e-14!71;UBERON:0004121!4.46e-13!102;UBERON:0000924!4.46e-13!102;UBERON:0006601!4.46e-13!102;UBERON:0000956!7.12e-12!21;UBERON:0001869!7.12e-12!21;UBERON:0000203!7.12e-12!21;UBERON:0003056!1.47e-10!49;UBERON:0002619!5.09e-10!17;UBERON:0002021!6.72e-08!10;UBERON:0000411!6.72e-08!10;UBERON:0001950!6.72e-08!10;UBERON:0007023!7.55e-08!51;UBERON:0000477!1.03e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.26e-21,54;UBERON:0004111,2.73e-21,122;UBERON:0001049,4.30e-20,52;UBERON:0005068,4.30e-20,52;UBERON:0006241,4.30e-20,52;UBERON:0007135,4.30e-20,52;UBERON:0000025,3.25e-19,114;UBERON:0002020,3.93e-19,34;UBERON:0001017,2.85e-17,73;UBERON:0000955,4.50e-17,47;UBERON:0006238,4.50e-17,47;UBERON:0001016,1.24e-16,75;UBERON:0002616,1.37e-16,46;UBERON:0010314,2.71e-16,92;UBERON:0003528,3.24e-16,29;UBERON:0002791,3.24e-16,29;UBERON:0001893,3.24e-16,29;UBERON:0003080,5.85e-15,40;UBERON:0002780,2.26e-14,39;UBERON:0001890,2.26e-14,39;UBERON:0006240,2.26e-14,39;UBERON:0002346,7.11e-14,64;UBERON:0003075,7.11e-14,64;UBERON:0007284,7.11e-14,64;UBERON:0004121,1.23e-12,95;UBERON:0000924,1.23e-12,95;UBERON:0006601,1.23e-12,95;UBERON:0010371,3.93e-12,73;UBERON:0000956,7.12e-12,21;UBERON:0001869,7.12e-12,21;UBERON:0000203,7.12e-12,21;UBERON:0003056,1.47e-10,49;UBERON:0002619,5.09e-10,17;UBERON:0002021,6.72e-08,10;UBERON:0000411,6.72e-08,10;UBERON:0001950,6.72e-08,10;UBERON:0007023,7.55e-08,51
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93770506,15.5527690783394,16.7270636811575,14.8486543347401,19.555330225799,25.5399178191288,33.2430046319718,26.9599144446929,44.7364305422586,31.0031116276305,13.0079395058262,13.0712207461107,23.7230449779738,19.7614529920929,18.4162176784948,19.9507305697782,22.3951541931594,23.1739151180821,16.6693043369944,30.5311806633337,9.79634473947353,11.5553372715394,10.3738066736476,5.97635785697857,6.98204113103178,6.75516606256301,5.88957702647847,5.90758108698309,6.3608863467333,5.18206285253999,5.04130925684203,5.36018344068638,5.77271049841977,5.14258369598903,37.8639740637403,14.2071010159401,8.97138566094757,9.90519236548063,44.626796221436,21.5834846768859,28.2053501371588,31.2977833455436,35.1100472824754,95.4430614022842,86.0808192268421,93.954864204061,72.8657493137235,87.6905625306422,101.22278225022,88.4279475303666,95.4680950835347,92.8941938417619,106.658624220875,14.4264413142006,23.9414924040619,16.9026269696593,23.8244582726928,23.686287376962,29.4149613520023,18.6687251353357,20.6035057238894,20.2179102042844,16.9307131881744,17.7435509923168,19.4285131627658,21.1629806881934,23.5612560849919,22.7444457064229,28.1013277857013,23.292749514916,24.6923802193542,20.6042950401653,19.4302574577404,16.1148548621145,18.4574838405711,17.8827142460491,16.1334522461885,20.6099543109574,18.8690575598439,16.8293735042951,22.0978557607788,20.2348129630334,20.2011217796786,24.4388137335799,22.8530399111307,18.0061658994663,17.6627998952001,19.8693809310576,26.2301106834843,20.8199131516413,25.1399133236509,21.6155815237793,24.7062389413857,34.7801753430632
|phase1_expression=24.0223270657191,42.9239751396414,59.1499011206397,29.6414927080693,41.0734498556005,34.2473714700255,25.4637778249123,9.68424925811822,7.180224829735,7.0219357896598,12.3276937122364,15.3162545271046,3.76641605848653,4.98296293788285,22.9845735652807,21.6648536107114,25.1842276126133,8.67520954735154,6.58149281307546,7.63901373236454,36.7387013452621,6.65249373045932,4.70159620450084,20.3190376947626,22.940928106717,41.3447014162815,30.5841017272943,35.1218109277999,14.6318032981408,17.3900789534352,21.9513205548752,10.1604907753541,6.76571266343027,0,16.7533939455739,12.9663023379624,15.5168710759401,49.805264057692,33.5974198145234,32.4584721263755,74.1171674919078,60.1080026763432,54.3771595394892,13.9745467952891,13.2803779897564,16.702754446713,28.9484797408774,17.6600376668162,38.4450819785326,33.636372539851,22.9577731465595,14.3752564364972,7.88578248471361,7.97898356212479,6.38578218370682,22.6388303711633,23.2092086350393,25.2679325215947,56.6486090406874,44.9642332381228,41.1990412279016,31.5125414824293,24.0109594950008,30.5965903875676,22.7439263390404,29.8401648277362,27.2636100571748,21.9004434033286,49.3562554588354,43.8769299577995,50.0573408016289,77.4114167734308,76.4205151692583,45.444086508748,30.3830143127809,40.4456266108409,121.127469099328,92.3179454355907,91.2422807542086,60.4039197804288,45.1948959395904,48.9658568323354,98.8307816464889,87.2282045549104,83.8862380294688,73.6571463684169,62.3587961900071,58.1566270974938,19.764536459961,19.6486056277642,23.4790235848359,22.371020801516,23.1190253460635,44.7953649059388,30.5394916200404,39.8743929516629,34.8302161926745,21.9855116125695,22.3415963958467,16.606960001986,19.858922188512,23.0987659345772,5.09610479413291,7.11066703153331,21.8655951421326,24.5759069510846,20.7265022456061,34.255163915718,6.73238497482646,46.9077159444846,12.1439728736295,23.4438418300349,23.0615497256059,24.2663451289722,26.1046929841265,49.2613038012328,22.0003521283593,39.7648231529757,26.5383165584962,20.544389943321,33.7887523244402,22.7891368973554,27.9587641827183,61.7767481694365,52.1522299965503,16.860165643767,11.3824368280624,9.59844369589452,7.87835407853001,74.4459477841969,73.6575970537989,54.1570257606446,88.4765789778687,87.7104018643034,83.9463700020623,73.1708096435587,21.0807483170155,25.8766498868993,30.326731012041,63.3429986218287,10.4096354370163,15.1735388926092,16.2055916824814,15.5225962370787,12.9949713379036,13.9643955110486,16.7726086961915,26.6464471861186,14.4430555265004,13.4265316919152,19.1786725338704,15.5628970023578,17.5169767012127,17.4126083261083,22.0186885956499,13.1362616100206,3.51106593656617,4.88961023517959,6.25159698670304,20.2983257084792,18.2930326785255,25.2086886045421,25.3316867076175,23.2181793461937,22.0601971428951,24.8811320882936,29.2418007525585,30.0086929883626,30.1144525341669,37.7585167381919,43.290744297487,48.6845958126357,48.9596757099043,44.5565310284434,62.2458247749817,55.7742999095722,23.1293148088659,16.1314845664762,16.6364835417482,13.4697269679054,13.4022159774977,16.9414160683608,16.6783532883653,15.4082757151173,21.353807769503,13.3406153326449,19.3528110776208,12.9321706826748,18.3266241891973,20.6728463990471,18.371734239349,17.7235733196387,21.6221407086513,11.3106027483632,13.5249282807697,13.6446389656361,15.3222464862424,19.8484370289602,21.3107130108747,25.8317758964304,25.9047900938268,28.5047448659359,31.1275258441506,19.3540322630669,20.0490175015467,22.2613491261005,23.9374943238433,22.4294758569748,24.4440817710163,16.686375972147,18.159145398804,18.3956146836015,35.9420516318386,27.5384301274693,20.594486425561,33.3404118890188,32.8297266745099,32.3237159313456,33.0708210398222,13.8328730592454,15.4816727619925,14.0888421193406,14.7854856421756,21.1057884376688,22.3761022432853,23.8063050386515,26.0097987775215,26.1328333785554,28.5424035896902,26.7097202986653,30.5652417902635,30.3763023021174,15.0791283939272,8.15858525728064,24.5882136509518,21.5230662117691,70.8028101846162,63.1770990731975,24.9181116972547,33.3261623909772,20.1925260426404,13.6653560503823,17.2338718186239,18.161628644394,16.0415045339324,18.6830510320629,12.9539424535966,13.7360253218317,16.9973744517005,51.4114106274891,22.5684735481147,14.9575107080494,26.5505743746329,27.5500105364134,54.4255067193848,11.8962511715941,11.7906187216253,13.2023555829129,10.335566250827,20.5981549122431,13.1798429515793,15.6319503675327,16.0423820273125,18.0140952023415,27.4088382294997,21.6584640821192,40.8527526904546,13.8647042404109,18.2395744133684,19.2903331528433,26.0690143454142,24.4365280114837,25.834196234533,16.4411072521884,27.4565898434541,28.5973295666157,29.3302769413099,29.3497530235834,14.3703339759356,16.9479319048118,17.0702451924485,21.338316966858,12.5336759750836,67.4948099318255,22.2132145037208,14.0343070214991,16.6675074632741,22.6042148405629,21.734382207643,31.1138315560871,14.4481665494777,12.4556792568056,17.8277966207707,39.1414953386197,13.2861117304077,19.3153493770506,15.5527690783394,16.7270636811575,14.8486543347401,19.555330225799,25.5399178191288,33.2430046319718,26.9599144446929,44.7364305422586,31.0031116276305,13.0079395058262,13.0712207461107,23.7230449779738,19.7614529920929,18.4162176784948,19.9507305697782,22.3951541931594,23.1739151180821,16.6693043369944,30.5311806633337,9.79634473947353,11.5553372715394,10.3738066736476,5.97635785697857,6.98204113103178,6.75516606256301,5.88957702647847,5.90758108698309,6.3608863467333,5.18206285253999,5.04130925684203,5.36018344068638,5.77271049841977,5.14258369598903,37.8639740637403,14.2071010159401,8.97138566094757,9.90519236548063,44.626796221436,21.5834846768859,28.2053501371588,31.2977833455436,35.1100472824754,95.4430614022842,86.0808192268421,93.954864204061,72.8657493137235,87.6905625306422,101.22278225022,88.4279475303666,95.4680950835347,92.8941938417619,106.658624220875,14.4264413142006,23.9414924040619,16.9026269696593,23.8244582726928,23.686287376962,29.4149613520023,18.6687251353357,20.6035057238894,20.2179102042844,16.9307131881744,17.7435509923168,19.4285131627658,21.1629806881934,23.5612560849919,22.7444457064229,28.1013277857013,23.292749514916,24.6923802193542,20.6042950401653,19.4302574577404,16.1148548621145,18.4574838405711,17.8827142460491,16.1334522461885,20.6099543109574,18.8690575598439,16.8293735042951,22.0978557607788,20.2348129630334,20.2011217796786,24.4388137335799,22.8530399111307,18.0061658994663,17.6627998952001,19.8693809310576,26.2301106834843,20.8199131516413,25.1399133236509,21.6155815237793,24.7062389413857,34.7801753430632
|short_description=p2@Rnf11
}}
}}

Latest revision as of 03:41, 26 September 2015

Short description:p2@Rnf11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnf11_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000030284_5end
EntrezGene:Rnf11
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rnf11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I542.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I659.15
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.46
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.94
GP2+ M cell, pool1.CNhs13228.11845-124H941.34
GP2+ M cell, pool2.CNhs13231.11846-124I130.58
GP2+ M cell, pool3.CNhs13240.11847-124I235.12
Ileum epithelium, pool1.CNhs13199.10252-104B914.63
Ileum epithelium, pool2.CNhs13232.10253-104C117.39
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G849.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H133.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H332.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G974.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H260.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H454.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.70
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B838.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C333.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.64
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C356.65
Mouse Granule cells, donor2.CNhs12357.11731-123E344.96
Mouse Granule cells, donor3.CNhs12108.11636-122C741.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C631.51
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.84
Mouse Microglia, donor1.CNhs12629.11718-123C827.26
Mouse Microglia, donor2.CNhs12634.11736-123E821.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D549.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F543.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F177.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D576.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D245.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3121.13
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F392.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D791.24
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D460.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.97
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E498.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E587.23
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I683.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D673.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F662.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E158.16
Mouse Schwann, donor1.CNhs12507.11728-123D919.76
Mouse Schwann, donor2.CNhs12573.11746-123F919.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C844.80
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F639.87
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.26
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D746.91
adrenal gland, embryo E14.CNhs11038.406-44C512.14
adrenal gland, embryo E16.CNhs11004.1254-43D623.44
adrenal gland, embryo E17.CNhs11043.1263-45I123.06
adrenal gland, embryo E18.CNhs11026.1262-18F524.27
adrenal gland, neonate N00.CNhs11191.1311-23C126.10
adrenal gland, neonate N25.CNhs11223.1377-27I349.26
amnion, adult pregnant day17.5.CNhs10488.583-22A822.00
aorta, adult.CNhs10498.46-23H139.76
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F520.54
bone (os femoris), neonate N16.CNhs11225.1525-43A633.79
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B261.78
cerebellum, neonate N30.CNhs11135.1395-42I252.15
colon, adult.CNhs10468.36-18H716.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.38
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.88
corpora quadrigemina, adult.CNhs10501.16-22A474.45
corpus striatum, adult.CNhs10487.19-21D873.66
corpus striatum, neonate N00.CNhs11226.630-43F154.16
cortex, adult.CNhs10473.12-14D588.48
cortex, neonate N30.CNhs11107.1392-42F287.71
diencephalon, adult.CNhs10482.20-12F283.95
diencephalon, neonate N30.CNhs11201.1388-42B273.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.08
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.88
epididymis, adult.CNhs10490.58-23B230.33
eyeball, adult.CNhs10484.31-12G463.34
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E215.17
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C612.99
eyeball, neonate N01.CNhs11140.1532-43E713.96
eyeball, neonate N02.CNhs11205.1551-44G816.77
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E214.44
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E219.18
forelimb, embryo E14.CNhs10577.413-26A815.56
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B522.02
gonad, embryo E13.CNhs11044.1564-45I613.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E920.30
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I925.21
heart, embryo E14.CNhs10597.403-26D425.33
heart, embryo E15.CNhs11017.431-16C823.22
heart, embryo E16.CNhs11021.457-17C622.06
heart, embryo E17.CNhs11025.479-18E524.88
heart, embryo E18.CNhs11030.1283-20G329.24
heart, neonate N00.CNhs11213.639-21E330.01
heart, neonate N03.CNhs11221.1349-25I230.11
heart, neonate N10.CNhs11118.749-24G137.76
heart, neonate N16.CNhs11209.782-15G143.29
heart, neonate N20.CNhs11127.821-26I648.68
heart, neonate N25.CNhs11196.1351-25D348.96
heart, neonate N30.CNhs11202.1390-42D244.56
hippocampus, adult.CNhs10478.13-16E862.25
hippocampus, neonate N00.CNhs11228.627-43G155.77
intestinal mucosa, adult.CNhs10506.860-29I323.13
intestine, adult.CNhs10496.178-9A316.13
intestine, embryo E12.CNhs11019.1251-16I516.64
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D813.40
intestine, embryo E16.CNhs10585.463-22H416.94
intestine, embryo E17.CNhs10582.482-18D316.68
intestine, embryo E18.CNhs10526.1289-20F715.41
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E913.34
intestine, neonate N06.CNhs11102.688-20B819.35
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A518.33
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E318.37
intestine, neonate N30.CNhs11131.1384-42G117.72
kidney, embryo E14.CNhs10606.411-4I921.62
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I213.64
kidney, embryo E18.CNhs11001.1288-20C715.32
kidney, neonate N00.CNhs11214.646-21G719.85
kidney, neonate N10.CNhs11206.758-6D521.31
kidney, neonate N20.CNhs11113.832-19I125.83
kidney, neonate N25.CNhs11122.1353-25F325.90
kidney, neonate N30.CNhs11203.1385-42H128.50
liver, adult pregnant day01.CNhs10466.508-5B231.13
liver, embryo E12.CNhs10601.355-15F819.35
liver, embryo E13.CNhs10524.378-3H620.05
liver, embryo E14.CNhs10594.409-16E122.26
liver, embryo E15.CNhs10520.433-16D723.94
liver, embryo E16.CNhs10523.462-17F522.43
liver, embryo E17.CNhs10510.481-18A324.44
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F418.16
liver, neonate N03.CNhs11123.1345-25G218.40
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H227.54
liver, neonate N10.CNhs11115.751-24B920.59
liver, neonate N20.CNhs11220.823-25A333.34
liver, neonate N25.CNhs11198.1368-26H132.83
liver, neonate N30.CNhs11106.1382-42D132.32
lung, adult.CNhs10474.28-22B133.07
lung, embryo E12.CNhs10522.354-16G213.83
lung, embryo E14.CNhs10604.404-26F815.48
lung, embryo E15.CNhs11020.432-17C514.09
lung, embryo E16.CNhs10998.458-17B614.79
lung, embryo E17.CNhs10605.480-44A621.11
lung, embryo E18.CNhs10583.1287-20I622.38
lung, neonate N00.CNhs11224.640-42C623.81
lung, neonate N06.CNhs11212.683-20E526.01
lung, neonate N07.CNhs11111.715-19A326.13
lung, neonate N10.CNhs11219.750-23E628.54
lung, neonate N20.CNhs11109.822-18A426.71
lung, neonate N25.CNhs11119.1359-25C730.57
lung, neonate N30.CNhs11133.1394-42H230.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B624.59
mammary gland, adult pregnant day19.CNhs10476.588-5H221.52
medulla oblongata, adult.CNhs10477.17-12C270.80
medulla oblongata, neonate N30.CNhs11200.1396-42A363.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.74
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.00
olfactory brain, adult.CNhs10489.18-22I951.41
ovary, adult.CNhs10507.91-2I722.57
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I426.55
oviduct, adult pregnant day01.CNhs10500.988-6G627.55
pancreas, adult.CNhs10486.34-16E454.43
pancreas, embryo E14.CNhs11012.405-44F411.90
pancreas, embryo E15.CNhs11042.1556-45F211.79
pancreas, embryo E16.CNhs11003.460-26E513.20
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I720.60
pancreas, neonate N00.CNhs11105.645-26G913.18
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G840.85
pituitary gland, embryo E12.CNhs11018.346-16E613.86
pituitary gland, embryo E13.CNhs11009.370-44C718.24
pituitary gland, embryo E14.CNhs11037.398-44A519.29
pituitary gland, embryo E15.CNhs10592.427-16B926.07
pituitary gland, embryo E16.CNhs11036.449-43F624.44
pituitary gland, embryo E17.CNhs11039.1265-44F525.83
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I727.46
placenta, adult pregnant day17.CNhs10464.577-18G328.60
prostate, adult.CNhs10470.859-1F829.33
skin, adult.CNhs10492.30-1C329.35
skin, neonate N00.CNhs11124.650-25G414.37
skin, neonate N03.CNhs11215.662-22H316.95
skin, neonate N06.CNhs11097.693-20I517.07
skin, neonate N10.CNhs11108.762-6C421.34
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C967.49
spleen, adult.CNhs10465.25-2G222.21
spleen, embryo E16.CNhs11035.461-43C114.03
spleen, embryo E18.CNhs11011.1271-21F216.67
spleen, neonate N10.CNhs11116.752-24D122.60
spleen, neonate N20.CNhs11112.824-19H121.73
spleen, neonate N25.CNhs11099.1354-25G331.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.83
stomach, adult.CNhs10503.33-1H639.14
stomach, embryo E12.CNhs10588.356-43E313.29
stomach, embryo E15.CNhs10603.1252-16G819.32
stomach, embryo E16.CNhs11022.459-17D415.55
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C614.85
stomach, neonate N03.CNhs11193.1340-24B819.56
stomach, neonate N07.CNhs11210.718-18A925.54
stomach, neonate N25.CNhs11104.1355-25E433.24
stomach, neonate N30.CNhs11134.1386-42I126.96
submandibular gland, adult.CNhs10469.59-29C144.74
testis, adult.CNhs10504.57-7G531.00
testis, embryo E13.CNhs11031.389-23F513.01
testis, embryo E15.CNhs11034.443-27C513.07
testis, embryo E16.CNhs11033.470-26G523.72
testis, embryo E17.CNhs11029.486-18I519.76
testis, embryo E18.CNhs11027.503-18G518.42
testis, neonate N00.CNhs11189.1300-22B719.95
testis, neonate N07.CNhs11222.726-26I422.40
testis, neonate N10.CNhs11204.763-44D923.17
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E230.53
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I411.56
thymus, embryo E15.CNhs11005.430-45I210.37
thymus, embryo E16.CNhs11002.456-26C55.98
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C75.91
thymus, neonate N06.CNhs11197.681-26C46.36
thymus, neonate N07.CNhs11211.713-19D35.18
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G75.77
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B437.86
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.91
urinary bladder, adult.CNhs10481.879-12E444.63
uterus, adult pregnant day19.CNhs10497.590-15F521.58
uterus, adult.CNhs10509.92-27E528.21
vagina, adult.CNhs10502.89-27D531.30
vesicular gland, adult.CNhs10491.51-27F835.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A195.44
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A286.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A393.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D772.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A487.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5101.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A688.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A892.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9106.66
whole body, embryo E11.CNhs11014.324-5I814.43
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H216.90
whole body, embryo E14.5.CNhs10578.420-27D223.82
whole body, embryo E14.CNhs10519.395-14B123.69
whole body, embryo E16.CNhs10514.453-14F229.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.16
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.66
whole body, embryo E17.5.CNhs10513.490-9F919.87
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B320.82
whole body, neonate N00.CNhs10525.657-19C225.14
whole body, neonate N01.CNhs10576.659-23C621.62
whole body, neonate N06.CNhs10515.692-21D124.71
whole body, neonate N10.CNhs10518.761-6B434.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.00e-1223
neuroblast (sensu Vertebrata)2.00e-1223

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.26e-2154
anatomical conduit2.73e-21122
neural tube4.30e-2052
neural rod4.30e-2052
future spinal cord4.30e-2052
neural keel4.30e-2052
tube3.25e-19114
gray matter3.93e-1934
central nervous system2.85e-1773
brain4.50e-1747
future brain4.50e-1747
nervous system1.24e-1675
regional part of brain1.37e-1646
structure with developmental contribution from neural crest2.71e-1692
brain grey matter3.24e-1629
regional part of telencephalon3.24e-1629
telencephalon3.24e-1629
anterior neural tube5.85e-1540
regional part of forebrain2.26e-1439
forebrain2.26e-1439
future forebrain2.26e-1439
neurectoderm7.11e-1464
neural plate7.11e-1464
presumptive neural plate7.11e-1464
ectoderm-derived structure1.23e-1295
ectoderm1.23e-1295
presumptive ectoderm1.23e-1295
ecto-epithelium3.93e-1273
cerebral cortex7.12e-1221
cerebral hemisphere7.12e-1221
pallium7.12e-1221
pre-chordal neural plate1.47e-1049
regional part of cerebral cortex5.09e-1017
occipital lobe6.72e-0810
visual cortex6.72e-0810
neocortex6.72e-0810
adult organism7.55e-0851
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