FFCP PHASE1:Mm9::chr17:27650332..27650350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268934 | |EntrezGene=268934 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |MCL_coexpression_id=42 | ||
|TSSclassifier=NA | |||
|UniProt=Q68EF4,G3XA00 | |UniProt=Q68EF4,G3XA00 | ||
|association_with_transcript=-46bp_to_ENSMUST00000088073,ENSMUST00000118161,ENSMUST00000169185_5end | |association_with_transcript=-46bp_to_ENSMUST00000088073,ENSMUST00000118161,ENSMUST00000169185_5end | ||
|cluster_id=chr17:27650332..27650350,- | |||
|description=CAGE_peak_1_at_Grm4_5end | |description=CAGE_peak_1_at_Grm4_5end | ||
|id=chr17:27650332..27650350,- | |id=chr17:27650332..27650350,- | ||
|ontology_enrichment_celltype=CL:0000117!6.82e-13!23;CL:0000337!6.82e-13!23;CL:0000540!2.67e-07!33;CL:0000047!2.67e-07!33;CL:0000031!2.67e-07!33;CL:0000404!2.67e-07!33 | |ontology_enrichment_celltype=CL:0000117!6.82e-13!23;CL:0000337!6.82e-13!23;CL:0000540!2.67e-07!33;CL:0000047!2.67e-07!33;CL:0000031!2.67e-07!33;CL:0000404!2.67e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.70e-21,23;CL:0000337,8.70e-21,23;CL:0000540,5.29e-14,33;CL:0000047,5.29e-14,33;CL:0000031,5.29e-14,33;CL:0000404,5.29e-14,33;CL:0002319,3.33e-11,43;CL:0000393,7.49e-11,39;CL:0000211,7.49e-11,39;CL:0000221,8.55e-11,44;CL:0000133,8.55e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.46e-21!63;UBERON:0001049!3.71e-20!52;UBERON:0005068!3.71e-20!52;UBERON:0006241!3.71e-20!52;UBERON:0007135!3.71e-20!52;UBERON:0001017!3.40e-19!73;UBERON:0005743!3.40e-19!73;UBERON:0000955!5.87e-19!50;UBERON:0006238!5.87e-19!50;UBERON:0000073!1.91e-18!75;UBERON:0001016!1.91e-18!75;UBERON:0002616!3.45e-18!49;UBERON:0004121!4.56e-18!102;UBERON:0000924!4.56e-18!102;UBERON:0006601!4.56e-18!102;UBERON:0002346!1.74e-17!71;UBERON:0003075!1.74e-17!71;UBERON:0007284!1.74e-17!71;UBERON:0007811!7.84e-17!86;UBERON:0000153!5.44e-16!94;UBERON:0003056!3.77e-15!49;UBERON:0002020!5.76e-14!34;UBERON:0003080!1.27e-13!40;UBERON:0002780!5.32e-13!39;UBERON:0001890!5.32e-13!39;UBERON:0006240!5.32e-13!39;UBERON:0002791!1.26e-10!29;UBERON:0003528!1.26e-10!29;UBERON:0001893!1.26e-10!29;UBERON:0000064!3.17e-08!99;UBERON:0003076!1.72e-07!12;UBERON:0003057!1.72e-07!12 | |ontology_enrichment_uberon=UBERON:0000033!5.46e-21!63;UBERON:0001049!3.71e-20!52;UBERON:0005068!3.71e-20!52;UBERON:0006241!3.71e-20!52;UBERON:0007135!3.71e-20!52;UBERON:0001017!3.40e-19!73;UBERON:0005743!3.40e-19!73;UBERON:0000955!5.87e-19!50;UBERON:0006238!5.87e-19!50;UBERON:0000073!1.91e-18!75;UBERON:0001016!1.91e-18!75;UBERON:0002616!3.45e-18!49;UBERON:0004121!4.56e-18!102;UBERON:0000924!4.56e-18!102;UBERON:0006601!4.56e-18!102;UBERON:0002346!1.74e-17!71;UBERON:0003075!1.74e-17!71;UBERON:0007284!1.74e-17!71;UBERON:0007811!7.84e-17!86;UBERON:0000153!5.44e-16!94;UBERON:0003056!3.77e-15!49;UBERON:0002020!5.76e-14!34;UBERON:0003080!1.27e-13!40;UBERON:0002780!5.32e-13!39;UBERON:0001890!5.32e-13!39;UBERON:0006240!5.32e-13!39;UBERON:0002791!1.26e-10!29;UBERON:0003528!1.26e-10!29;UBERON:0001893!1.26e-10!29;UBERON:0000064!3.17e-08!99;UBERON:0003076!1.72e-07!12;UBERON:0003057!1.72e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-27,54;UBERON:0001017,3.50e-27,73;UBERON:0001016,4.34e-26,75;UBERON:0001049,1.61e-24,52;UBERON:0005068,1.61e-24,52;UBERON:0006241,1.61e-24,52;UBERON:0007135,1.61e-24,52;UBERON:0004121,4.41e-21,95;UBERON:0000924,4.41e-21,95;UBERON:0006601,4.41e-21,95;UBERON:0002346,2.24e-20,64;UBERON:0003075,2.24e-20,64;UBERON:0007284,2.24e-20,64;UBERON:0002020,9.05e-20,34;UBERON:0000955,5.30e-19,47;UBERON:0006238,5.30e-19,47;UBERON:0002616,7.73e-18,46;UBERON:0010371,1.16e-17,73;UBERON:0003528,4.61e-14,29;UBERON:0002791,4.61e-14,29;UBERON:0001893,4.61e-14,29;UBERON:0003080,1.50e-13,40;UBERON:0010314,2.26e-13,92;UBERON:0003076,3.85e-13,12;UBERON:0003057,3.85e-13,12;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0003056,7.94e-12,49;UBERON:0002420,3.90e-10,8;UBERON:0007245,3.90e-10,8;UBERON:0010009,3.90e-10,8;UBERON:0010011,3.90e-10,8;UBERON:0000454,3.90e-10,8;UBERON:0002240,5.99e-09,6;UBERON:0005174,5.99e-09,6;UBERON:0001137,5.99e-09,6;UBERON:0002021,2.70e-08,10;UBERON:0000411,2.70e-08,10;UBERON:0001950,2.70e-08,10;UBERON:0001948,7.72e-08,5;UBERON:0002315,7.72e-08,5;UBERON:0002619,1.21e-07,17;UBERON:0011216,4.51e-07,194;UBERON:0000956,8.02e-07,21;UBERON:0001869,8.02e-07,21;UBERON:0000203,8.02e-07,21 | |||
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0.500895729946347,5.70789524500425,9.1108929832255,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,8.1641558545027,0.0992909512008853,0,0.799962113967033,1.60586496747019,1.72269589234506,3.01533397311352,1.939241094173,1.14014051673824,0.504060259519861,3.99114919179548,0,0,0,0,1.99481574430191,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,10.1413024560989,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.768436610643109,0,0.270011876663381,0.420649922702764,15.7108041422092,9.49734726091938,2.32732518508413,1.0543001812006,6.43453150627015,25.3266526298594,19.6638500651189,11.8277030607307,4.08847491963601,1.9212405156506,1.56274011167028,28.4766658981409,17.4456409109821,7.94550888439413,12.9636577608414,7.97281412474976,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,1.21439728736295,0,0.922461989024234,0.150722640552623,0,0,0.247194967734374,0,0,0.647067399789637,0,0,0,122.675153947838,403.184910615901,0,0,0,0,7.04016005202667,10.0650132620098,1.7591609295801,2.78118912307642,1.02286182932132,7.89594569326328,11.1946471516753,0.101839363850316,0.248813941220186,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.90422890701429,0.612328492361951,0.640568601424249,1.49922759295566,3.10444044886819,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.420814919341911,0.126473074248515,0,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,4.33486592967038,4.57125577709592,0,0,0,0,0,0,0,0,0,0.292255857911312,0,26.0270266301664,1.13552068166615,0,0.162886959353576,2.63952196756057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.905510786479282,1.07168517515796,0.709360934569094,0.535106452806212,0.493647061806363,0.913394847343798,2.81606049676452,0.42366414172764,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,0,1.82452693761148,1.64337531463724,1.68897069871134,1.79026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.304827226619999,0.504130925684203,0.0974578807397524,0.288635524920988,0.116876902181569,2.26730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,2.82375921308533,2.30162618253588,0.572895513439397,3.78077001156113,3.42541259885321,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,1.55328093525546,0.31136204275253,1.59609949360412,0.512200817262403,0,0.209613162627982,0.183843508450014,1.33348036680969,0.824140228955577,0,0.505394423527595,0,0.565879024158229,0.655490552289177,0.640251524048693,0.402048282689293,1.42888107384922,0.347652977834566,0.578727661391115,0,0.147198920134397,0,1.06485483695602,0.238436189947321,0.872078499793971,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.135804113845862,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,1.74867404556562,0.233931608445408,0.859484216193193,0.57386499620653,0.220591419119515,0 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|phase1_expression=2.88267924788629,0.348975407639361,0,0,0.500895729946347,5.70789524500425,9.1108929832255,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,8.1641558545027,0.0992909512008853,0,0.799962113967033,1.60586496747019,1.72269589234506,3.01533397311352,1.939241094173,1.14014051673824,0.504060259519861,3.99114919179548,0,0,0,0,1.99481574430191,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,10.1413024560989,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.768436610643109,0,0.270011876663381,0.420649922702764,15.7108041422092,9.49734726091938,2.32732518508413,1.0543001812006,6.43453150627015,25.3266526298594,19.6638500651189,11.8277030607307,4.08847491963601,1.9212405156506,1.56274011167028,28.4766658981409,17.4456409109821,7.94550888439413,12.9636577608414,7.97281412474976,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0,1.21439728736295,0,0.922461989024234,0.150722640552623,0,0,0.247194967734374,0,0,0.647067399789637,0,0,0,122.675153947838,403.184910615901,0,0,0,0,7.04016005202667,10.0650132620098,1.7591609295801,2.78118912307642,1.02286182932132,7.89594569326328,11.1946471516753,0.101839363850316,0.248813941220186,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.90422890701429,0.612328492361951,0.640568601424249,1.49922759295566,3.10444044886819,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.420814919341911,0.126473074248515,0,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,4.33486592967038,4.57125577709592,0,0,0,0,0,0,0,0,0,0.292255857911312,0,26.0270266301664,1.13552068166615,0,0.162886959353576,2.63952196756057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0.905510786479282,1.07168517515796,0.709360934569094,0.535106452806212,0.493647061806363,0.913394847343798,2.81606049676452,0.42366414172764,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,0,1.82452693761148,1.64337531463724,1.68897069871134,1.79026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.304827226619999,0.504130925684203,0.0974578807397524,0.288635524920988,0.116876902181569,2.26730383615211,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.643105137237198,0,2.82375921308533,2.30162618253588,0.572895513439397,3.78077001156113,3.42541259885321,1.5107877947794,1.35004500046361,3.15224842256954,2.26571204492102,1.55328093525546,0.31136204275253,1.59609949360412,0.512200817262403,0,0.209613162627982,0.183843508450014,1.33348036680969,0.824140228955577,0,0.505394423527595,0,0.565879024158229,0.655490552289177,0.640251524048693,0.402048282689293,1.42888107384922,0.347652977834566,0.578727661391115,0,0.147198920134397,0,1.06485483695602,0.238436189947321,0.872078499793971,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.135804113845862,0.561142271657738,0.949080144993393,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,1.74867404556562,0.233931608445408,0.859484216193193,0.57386499620653,0.220591419119515,0 | ||
|short_description=p1@Grm4 | |short_description=p1@Grm4 | ||
}} | }} |
Latest revision as of 03:36, 26 September 2015
Short description: | p1@Grm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -46bp_to_ENSMUST00000088073, ENSMUST00000118161, ENSMUST00000169185_5end |
EntrezGene: | Grm4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.70e-21 | 23 |
neuroblast (sensu Vertebrata) | 8.70e-21 | 23 |
neuron | 5.29e-14 | 33 |
neuronal stem cell | 5.29e-14 | 33 |
neuroblast | 5.29e-14 | 33 |
electrically signaling cell | 5.29e-14 | 33 |
neural cell | 3.33e-11 | 43 |
electrically responsive cell | 7.49e-11 | 39 |
electrically active cell | 7.49e-11 | 39 |
ectodermal cell | 8.55e-11 | 44 |
neurectodermal cell | 8.55e-11 | 44 |