FFCP PHASE1:Mm9::chr7:148380006..148380017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70552 | |EntrezGene=70552 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BMW2,Q8K375 | |UniProt=Q8BMW2,Q8K375 | ||
|association_with_transcript=-11bp_to_NM_001172064,NM_001172065,uc009kjx.2,uc012fwq.1_5end | |association_with_transcript=-11bp_to_NM_001172064,NM_001172065,uc009kjx.2,uc012fwq.1_5end | ||
|cluster_id=chr7:148380006..148380017,+ | |||
|description=CAGE_peak_5_at_Lrrc56_5end | |description=CAGE_peak_5_at_Lrrc56_5end | ||
|id=chr7:148380006..148380017,+ | |id=chr7:148380006..148380017,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.49e-07!23;CL:0000337!2.49e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.28e-15,14;UBERON:0003135,5.35e-14,15;UBERON:0003101,3.50e-13,16;UBERON:0000079,3.50e-13,16;UBERON:0004176,1.84e-12,17;UBERON:0009196,1.84e-12,17;UBERON:0009117,1.84e-12,17;UBERON:0000991,8.03e-12,18;UBERON:0005564,8.03e-12,18;UBERON:0003133,4.35e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0.261199789138935,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0,0.191690942036473,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.11981512450592,0.599902730993408,0,0,0,0.125654352112864,0.521472960576829,0.511430914660661,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.710234206755631,0,0.308534225774757,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,0.80275294993896,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.358117032009409,0,0.291480836629851,0.556275906031529,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0,0.26175594198403,0.129614973291793,0,19.7292528539467,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,5.07326653734613,10.3690802252832,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.476872379894642,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0.261199789138935,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.220868540951614,0,0.191690942036473,0,0,0.383062014255563,0.46081959976873,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0.173485326766136,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0.11981512450592,0.599902730993408,0,0,0,0.125654352112864,0.521472960576829,0.511430914660661,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.710234206755631,0,0.308534225774757,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,0.80275294993896,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.358117032009409,0,0.291480836629851,0.556275906031529,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0,0.26175594198403,0.129614973291793,0,19.7292528539467,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,5.07326653734613,10.3690802252832,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.476872379894642,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p5@Lrrc56 | |short_description=p5@Lrrc56 | ||
}} | }} |
Latest revision as of 03:36, 26 September 2015
Short description: | p5@Lrrc56 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lrrc56_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -11bp_to_NM_001172064, NM_001172065, uc009kjx.2, uc012fwq.1_5end |
EntrezGene: | Lrrc56 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.28e-15 | 14 |
male reproductive organ | 5.35e-14 | 15 |
male organism | 3.50e-13 | 16 |
male reproductive system | 3.50e-13 | 16 |
external genitalia | 1.84e-12 | 17 |
indifferent external genitalia | 1.84e-12 | 17 |
indifferent gonad | 1.84e-12 | 17 |
gonad | 8.03e-12 | 18 |
gonad primordium | 8.03e-12 | 18 |
reproductive organ | 4.35e-09 | 24 |
reproductive structure | 1.87e-08 | 26 |
reproductive system | 1.87e-08 | 26 |