Personal tools

FFCP PHASE1:Mm9::chr11:98698150..98698173,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268480
|EntrezGene=268480
|HGNC=
|HGNC=
|MCL_coexpression_id=1610
|TSSclassifier=NA
|UniProt=Q68EF8
|UniProt=Q68EF8
|association_with_transcript=51bp_to_ENSMUST00000107479,NM_001080925,uc007lhr.1_5end
|association_with_transcript=51bp_to_ENSMUST00000107479,NM_001080925,uc007lhr.1_5end
|cluster_id=chr11:98698150..98698173,+
|description=CAGE_peak_2_at_Rapgefl1_5end
|description=CAGE_peak_2_at_Rapgefl1_5end
|id=chr11:98698150..98698173,+
|id=chr11:98698150..98698173,+
|ontology_enrichment_celltype=CL:0000117!2.21e-08!23;CL:0000337!2.21e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.80e-09,23;CL:0000337,2.80e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.41e-18!63;UBERON:0001049!2.77e-17!52;UBERON:0005068!2.77e-17!52;UBERON:0006241!2.77e-17!52;UBERON:0007135!2.77e-17!52;UBERON:0000955!2.10e-16!50;UBERON:0006238!2.10e-16!50;UBERON:0002616!1.01e-15!49;UBERON:0004121!5.64e-15!102;UBERON:0000924!5.64e-15!102;UBERON:0006601!5.64e-15!102;UBERON:0001017!7.58e-15!73;UBERON:0005743!7.58e-15!73;UBERON:0002020!1.99e-14!34;UBERON:0000073!1.83e-13!75;UBERON:0001016!1.83e-13!75;UBERON:0003056!2.36e-13!49;UBERON:0002346!8.14e-13!71;UBERON:0003075!8.14e-13!71;UBERON:0007284!8.14e-13!71;UBERON:0003080!1.21e-12!40;UBERON:0002780!4.45e-12!39;UBERON:0001890!4.45e-12!39;UBERON:0006240!4.45e-12!39;UBERON:0002791!1.05e-11!29;UBERON:0003528!1.05e-11!29;UBERON:0001893!1.05e-11!29;UBERON:0000153!1.93e-10!94;UBERON:0007811!1.04e-09!86;UBERON:0000956!1.82e-08!21;UBERON:0001869!1.82e-08!21;UBERON:0000203!1.82e-08!21;UBERON:0002619!4.33e-08!17;UBERON:0002021!4.39e-08!10;UBERON:0000411!4.39e-08!10;UBERON:0001950!4.39e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.21e-20,54;UBERON:0010371,1.41e-19,73;UBERON:0004121,6.32e-19,95;UBERON:0000924,6.32e-19,95;UBERON:0006601,6.32e-19,95;UBERON:0001049,2.73e-18,52;UBERON:0005068,2.73e-18,52;UBERON:0006241,2.73e-18,52;UBERON:0007135,2.73e-18,52;UBERON:0002020,2.66e-16,34;UBERON:0001017,2.83e-16,73;UBERON:0002346,1.91e-15,64;UBERON:0003075,1.91e-15,64;UBERON:0007284,1.91e-15,64;UBERON:0001016,2.43e-15,75;UBERON:0000955,4.88e-15,47;UBERON:0006238,4.88e-15,47;UBERON:0002616,3.20e-14,46;UBERON:0003080,6.18e-13,40;UBERON:0003528,9.32e-13,29;UBERON:0002791,9.32e-13,29;UBERON:0001893,9.32e-13,29;UBERON:0002780,3.11e-12,39;UBERON:0001890,3.11e-12,39;UBERON:0006240,3.11e-12,39;UBERON:0003056,7.67e-12,49;UBERON:0002021,2.19e-10,10;UBERON:0000411,2.19e-10,10;UBERON:0001950,2.19e-10,10;UBERON:0002619,3.65e-09,17;UBERON:0000956,1.60e-08,21;UBERON:0001869,1.60e-08,21;UBERON:0000203,1.60e-08,21;UBERON:0010314,7.90e-08,92
|phase1_expression=2.40223270657191,0.348975407639361,1.81999695755814,4.53696316960245,10.0179145989269,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.84877930359606,3.40173160604279,0,0.783599367416806,1.11994695955385,1.83527424853736,2.29692785646008,1.29228598847722,0.646413698057667,5.51067916423484,3.2763916868791,0,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0.782391344348039,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,0.335565212115473,0,0,0,0,0,2.63011399117477,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,0.725827286159344,1.21505344498522,0.841299845405528,6.56997264128748,5.96345060569357,1.5923803897944,0.383381884072945,2.75765635983006,6.60695285996332,6.89511625660014,6.45147439676223,1.71452174049252,2.74462930807229,3.12548022334056,4.4669279840221,2.8138130501584,5.34793867218835,6.77645746589436,8.39992916714707,3.91438836233131,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0.842666520790511,0.170430322578058,0,0.70667914902068,2.25349471642689,2.56652954828636,5.09610479413291,0,0.216491041011214,0,0.505524445014783,1.02765491747154,0,0.148442139064825,0.173485326766136,0,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.485300549842228,0,1.93950101254089,1.86391761218122,4.68449275218475,9.00620839297857,3.32094171771169,0.11981512450592,0,0.127070227073065,7.48953197024113,7.77751024791665,2.89005009859588,15.8180131374972,13.0414883238469,4.98691306942944,7.46309810111685,0.509196819251581,0.995255764880744,0.252722758433675,0.841767423545896,1.17108398666433,0.919608417733892,1.26043490863744,0.90422890701429,1.08858398642125,0.768682321709099,1.59292931751539,1.81092359517311,0.646703978798527,0.945530400839096,1.05570674498369,0.657587197282725,3.05851974148158,2.43776516565517,4.7329891373827,0,0.702213187313235,0,0,0,0.234526059981096,0,0.473489471170421,0.393528463494808,0.462801338662135,0.232533944750408,0,0.350296027101508,0.658239399653922,0,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,19.9775451135921,3.49875682089567,3.63460661282178,1.58670339998127,0.213288250535234,0.232236671860439,0.644337306610467,0.201683524623343,0.22237804384487,0.190225626112559,1.42358718463353,0,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,1.72910439899755,2.98711909881551,0.758671603812327,0.456994050438915,0,0.203651327845314,1.35766741017338,0.420814919341911,0.505892296994058,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0.651859905768103,0.339490171550376,0,1.50755631697634,0.476087281772027,0,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,1.47529281905711,0.827810238914197,4.17431533968259,4.33683240391152,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0.668396022247182,0,0,0.292255857911312,0,16.0660658210904,0.567760340833074,0.890328018336276,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,0.712994756769443,1.58018378967908,3.16255825724996,1.03135543248187,1.70219802876894,0.36012218806262,1.16422815404479,1.28602221018955,0.354680467284547,0.535106452806212,1.48094118541909,0.608929898229199,0.23467170806371,0.21183207086382,0.441056796109924,9.0687439117814,8.39615018818709,6.21223126760005,6.32673423216623,5.58079059133208,1.7488850197791,4.45020724825223,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0.954670618015114,0.316335993581135,1.01659733563424,1.29606408986162,2.50905955217362,1.52853794622324,2.83215127408124,4.21532624199213,1.57053565190418,3.24037433229482,1.24267862617385,0,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0.419437377702843,0,0,0.632022241256357,0,0.410843828659309,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.682205165178267,0.192423683280659,0.467507608726276,5.44152920676507,0.221985953374065,0.0897138566094757,0.167884616364078,2.12508553435409,0.750729901804728,1.64836461840539,7.28852488868824,1.50471631210609,14.6835479080437,15.1907328047368,17.1868654031819,15.4667864109319,12.3314853558716,15.107877947794,13.5004500046361,13.0593148935024,14.5005570874945,10.8729665467882,0.207574695168353,0.399024873401031,0.512200817262403,1.21553358534147,0.838452650511929,0.735374033800057,2.00022055021454,1.23621034343337,1.60459604795908,2.27427490587418,2.5347929989024,0.565879024158229,2.24739617927718,0.960377286073039,1.03383844120104,1.42888107384922,1.85414921511769,1.54327376370964,0.412085900803307,0.883193520806384,0,1.24233064311536,1.43061713968393,1.45346416632329,1.12931256498397,1.35383372626682,0.914639864363863,0.789209134313529,0.407412341537585,2.80571135828869,1.06771516311757,1.67457620038458,0.409231043169689,1.23949472948773,2.3148793317737,3.49734809113124,2.33931608445408,3.22306581072447,1.72159498861959,1.76473135295612,0
|phase1_expression=2.40223270657191,0.348975407639361,1.81999695755814,4.53696316960245,10.0179145989269,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.84877930359606,3.40173160604279,0,0.783599367416806,1.11994695955385,1.83527424853736,2.29692785646008,1.29228598847722,0.646413698057667,5.51067916423484,3.2763916868791,0,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0.782391344348039,0.218025156380447,0.659058548203415,0.388859798148567,0.279972843250725,0,0.335565212115473,0,0,0,0,0,2.63011399117477,2.64495489636016,1.26766280701236,0,0,0,0,0,0.299600110518405,1.15265491596466,0.725827286159344,1.21505344498522,0.841299845405528,6.56997264128748,5.96345060569357,1.5923803897944,0.383381884072945,2.75765635983006,6.60695285996332,6.89511625660014,6.45147439676223,1.71452174049252,2.74462930807229,3.12548022334056,4.4669279840221,2.8138130501584,5.34793867218835,6.77645746589436,8.39992916714707,3.91438836233131,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0.842666520790511,0.170430322578058,0,0.70667914902068,2.25349471642689,2.56652954828636,5.09610479413291,0,0.216491041011214,0,0.505524445014783,1.02765491747154,0,0.148442139064825,0.173485326766136,0,0,0,0.470354828542819,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.485300549842228,0,1.93950101254089,1.86391761218122,4.68449275218475,9.00620839297857,3.32094171771169,0.11981512450592,0,0.127070227073065,7.48953197024113,7.77751024791665,2.89005009859588,15.8180131374972,13.0414883238469,4.98691306942944,7.46309810111685,0.509196819251581,0.995255764880744,0.252722758433675,0.841767423545896,1.17108398666433,0.919608417733892,1.26043490863744,0.90422890701429,1.08858398642125,0.768682321709099,1.59292931751539,1.81092359517311,0.646703978798527,0.945530400839096,1.05570674498369,0.657587197282725,3.05851974148158,2.43776516565517,4.7329891373827,0,0.702213187313235,0,0,0,0.234526059981096,0,0.473489471170421,0.393528463494808,0.462801338662135,0.232533944750408,0,0.350296027101508,0.658239399653922,0,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,19.9775451135921,3.49875682089567,3.63460661282178,1.58670339998127,0.213288250535234,0.232236671860439,0.644337306610467,0.201683524623343,0.22237804384487,0.190225626112559,1.42358718463353,0,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,1.72910439899755,2.98711909881551,0.758671603812327,0.456994050438915,0,0.203651327845314,1.35766741017338,0.420814919341911,0.505892296994058,0.295220295959204,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0.651859905768103,0.339490171550376,0,1.50755631697634,0.476087281772027,0,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,1.47529281905711,0.827810238914197,4.17431533968259,4.33683240391152,0,0,0.315508219416257,0.780877488593277,0,0.238968797952552,0.668396022247182,0,0,0.292255857911312,0,16.0660658210904,0.567760340833074,0.890328018336276,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,0.712994756769443,1.58018378967908,3.16255825724996,1.03135543248187,1.70219802876894,0.36012218806262,1.16422815404479,1.28602221018955,0.354680467284547,0.535106452806212,1.48094118541909,0.608929898229199,0.23467170806371,0.21183207086382,0.441056796109924,9.0687439117814,8.39615018818709,6.21223126760005,6.32673423216623,5.58079059133208,1.7488850197791,4.45020724825223,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0,0,0.954670618015114,0.316335993581135,1.01659733563424,1.29606408986162,2.50905955217362,1.52853794622324,2.83215127408124,4.21532624199213,1.57053565190418,3.24037433229482,1.24267862617385,0,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0.419437377702843,0,0,0.632022241256357,0,0.410843828659309,0.25984164595559,0.179026695667481,0,0.240390899039938,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.682205165178267,0.192423683280659,0.467507608726276,5.44152920676507,0.221985953374065,0.0897138566094757,0.167884616364078,2.12508553435409,0.750729901804728,1.64836461840539,7.28852488868824,1.50471631210609,14.6835479080437,15.1907328047368,17.1868654031819,15.4667864109319,12.3314853558716,15.107877947794,13.5004500046361,13.0593148935024,14.5005570874945,10.8729665467882,0.207574695168353,0.399024873401031,0.512200817262403,1.21553358534147,0.838452650511929,0.735374033800057,2.00022055021454,1.23621034343337,1.60459604795908,2.27427490587418,2.5347929989024,0.565879024158229,2.24739617927718,0.960377286073039,1.03383844120104,1.42888107384922,1.85414921511769,1.54327376370964,0.412085900803307,0.883193520806384,0,1.24233064311536,1.43061713968393,1.45346416632329,1.12931256498397,1.35383372626682,0.914639864363863,0.789209134313529,0.407412341537585,2.80571135828869,1.06771516311757,1.67457620038458,0.409231043169689,1.23949472948773,2.3148793317737,3.49734809113124,2.33931608445408,3.22306581072447,1.72159498861959,1.76473135295612,0
|short_description=p2@Rapgefl1
|short_description=p2@Rapgefl1
}}
}}

Latest revision as of 03:29, 26 September 2015

Short description:p2@Rapgefl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rapgefl1_5end
Coexpression cluster:MCL_coexpression_mm9:1610
Association with transcript: 51bp_to_ENSMUST00000107479, NM_001080925, uc007lhr.1_5end
EntrezGene:Rapgefl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rapgefl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B95.51
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I29.01
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C39.07
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H36.21
skin, neonate N06.CNhs11097.693-20I56.33
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.80e-0923
neuroblast (sensu Vertebrata)2.80e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.21e-2054
ecto-epithelium1.41e-1973
ectoderm-derived structure6.32e-1995
ectoderm6.32e-1995
presumptive ectoderm6.32e-1995
neural tube2.73e-1852
neural rod2.73e-1852
future spinal cord2.73e-1852
neural keel2.73e-1852
gray matter2.66e-1634
central nervous system2.83e-1673
neurectoderm1.91e-1564
neural plate1.91e-1564
presumptive neural plate1.91e-1564
nervous system2.43e-1575
brain4.88e-1547
future brain4.88e-1547
regional part of brain3.20e-1446
anterior neural tube6.18e-1340
brain grey matter9.32e-1329
regional part of telencephalon9.32e-1329
telencephalon9.32e-1329
regional part of forebrain3.11e-1239
forebrain3.11e-1239
future forebrain3.11e-1239
pre-chordal neural plate7.67e-1249
occipital lobe2.19e-1010
visual cortex2.19e-1010
neocortex2.19e-1010
regional part of cerebral cortex3.65e-0917
cerebral cortex1.60e-0821
cerebral hemisphere1.60e-0821
pallium1.60e-0821
structure with developmental contribution from neural crest7.90e-0892
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:98698150..98698173,%2B&oldid=4230579"