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FFCP PHASE1:Mm9::chr14:55735423..55735446,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr14:55735423..55735446,-
|DHSsupport=NA
|short_description=p2@Jph4
|DPIdataset=NA
|description=CAGE_peak_2_at_Jph4_5end
|association_with_transcript=-6bp_to_ENSMUST00000133954_5end
|EntrezGene=319984
|EntrezGene=319984
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-6bp_to_ENSMUST00000133954_5end
|cluster_id=chr14:55735423..55735446,-
|description=CAGE_peak_2_at_Jph4_5end
|id=chr14:55735423..55735446,-
|ontology_enrichment_celltype=CL:0000117!1.93e-14!23;CL:0000337!1.93e-14!23;CL:0000540!2.52e-12!33;CL:0000047!2.52e-12!33;CL:0000031!2.52e-12!33;CL:0000404!2.52e-12!33;CL:0000221!1.04e-08!44;CL:0000133!1.04e-08!44;CL:0002319!1.09e-08!43;CL:0000393!3.92e-08!39;CL:0000211!3.92e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.04e-18,23;CL:0000337,2.04e-18,23;CL:0000540,2.38e-14,33;CL:0000047,2.38e-14,33;CL:0000031,2.38e-14,33;CL:0000404,2.38e-14,33;CL:0000393,1.46e-10,39;CL:0000211,1.46e-10,39;CL:0002319,1.09e-08,43;CL:0000221,2.79e-08,44;CL:0000133,2.79e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.12e-24!71;UBERON:0003075!1.12e-24!71;UBERON:0007284!1.12e-24!71;UBERON:0001017!4.43e-24!73;UBERON:0005743!4.43e-24!73;UBERON:0000073!1.10e-23!75;UBERON:0001016!1.10e-23!75;UBERON:0001049!7.26e-23!52;UBERON:0005068!7.26e-23!52;UBERON:0006241!7.26e-23!52;UBERON:0007135!7.26e-23!52;UBERON:0004121!1.58e-22!102;UBERON:0000924!1.58e-22!102;UBERON:0006601!1.58e-22!102;UBERON:0000955!1.88e-21!50;UBERON:0006238!1.88e-21!50;UBERON:0000033!4.80e-21!63;UBERON:0002616!7.04e-21!49;UBERON:0002020!8.37e-20!34;UBERON:0003056!4.96e-19!49;UBERON:0003080!8.65e-18!40;UBERON:0002780!2.88e-17!39;UBERON:0001890!2.88e-17!39;UBERON:0006240!2.88e-17!39;UBERON:0002791!1.18e-16!29;UBERON:0003528!1.18e-16!29;UBERON:0001893!1.18e-16!29;UBERON:0000956!8.49e-12!21;UBERON:0001869!8.49e-12!21;UBERON:0000203!8.49e-12!21;UBERON:0007811!8.94e-10!86;UBERON:0002619!1.96e-09!17;UBERON:0000153!3.76e-09!94;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.16e-27,54;UBERON:0002346,4.95e-26,64;UBERON:0003075,4.95e-26,64;UBERON:0007284,4.95e-26,64;UBERON:0001017,6.69e-26,73;UBERON:0001049,1.38e-25,52;UBERON:0005068,1.38e-25,52;UBERON:0006241,1.38e-25,52;UBERON:0007135,1.38e-25,52;UBERON:0002020,2.51e-25,34;UBERON:0001016,1.27e-24,75;UBERON:0000955,1.51e-21,47;UBERON:0006238,1.51e-21,47;UBERON:0003528,3.37e-21,29;UBERON:0002791,3.37e-21,29;UBERON:0001893,3.37e-21,29;UBERON:0002616,7.74e-21,46;UBERON:0010371,2.55e-20,73;UBERON:0004121,2.93e-20,95;UBERON:0000924,2.93e-20,95;UBERON:0006601,2.93e-20,95;UBERON:0003056,4.84e-20,49;UBERON:0003080,1.61e-19,40;UBERON:0002780,7.44e-19,39;UBERON:0001890,7.44e-19,39;UBERON:0006240,7.44e-19,39;UBERON:0010314,7.12e-15,92;UBERON:0000956,7.67e-15,21;UBERON:0001869,7.67e-15,21;UBERON:0000203,7.67e-15,21;UBERON:0002619,9.37e-12,17;UBERON:0002021,2.05e-10,10;UBERON:0000411,2.05e-10,10;UBERON:0001950,2.05e-10,10;UBERON:0002420,1.55e-07,8;UBERON:0007245,1.55e-07,8;UBERON:0010009,1.55e-07,8;UBERON:0010011,1.55e-07,8;UBERON:0000454,1.55e-07,8
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,30.1451526680801,33.8554226734101,33.5930643858275,0,0,0,0,0,0.299600110518405,0.384218305321555,25.9224030771194,23.2210213930508,19.7705463670299,26.5655415495537,23.6329338818226,21.5583806618319,18.4981759065196,24.8189072384706,6.60695285996332,36.5185786923637,23.0409799884365,20.5742608859102,31.929187617241,32.2966289745191,20.3803589271008,18.5711661310454,22.1557459276375,26.5165726926301,35.8776635613739,22.5543329448614,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,2.08182392119363,2.13125834818499,0.922461989024234,3.46662073271032,2.3517741427141,0.251333182659351,0,0.289198713839823,0,0.808834249737046,0,0.969750506270444,0,26.0574909340277,32.673686262899,0,0,0,0,16.7765516133401,42.0900554593136,37.3193425775207,53.3640662990289,42.9601968314955,23.0644729461112,32.123770087416,1.2220723662038,0,0,1.05220927943237,0.260240885925407,0.919608417733892,2.16074555766419,3.91832526372859,3.81004395247436,2.69038812598185,3.74806898238915,1.03481348295606,0,0,1.05570674498369,1.09597866213787,0.834141747676794,2.089512999133,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,64.7693041577512,28.9161960785789,0,0,1.91959425481711,0.464473343720877,1.67527699718721,1.4117846723634,1.55664630691409,0.190225626112559,0.949058123089023,1.15289268306808,0.502670417600539,1.79060824837036,0.38992817423824,0,0.432276099749388,0.199141273254367,0.569003702859245,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,0,0.469380496577004,0.502518772325447,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,14.6101036888891,12.5416504653657,0,0.252470927204373,0,1.17131623288992,2.15423397732799,0.238968797952552,2.45078541490634,0.849229592366497,0,1.16902343164525,1.18586333383957,20.5645642509957,0.99358059645788,2.13678724400706,0.977321756121456,2.96946221350564,0,0.971122544619926,1.209294227859,0.377210159511796,0.590603785761546,1.22974059177571,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.709360934569094,2.67553226403106,3.1264313914403,3.04464949114599,0,0.42366414172764,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.820704498725306,0.291480836629851,16.5028518789354,0,0.412773735926445,0,0,0.27338845544205,0,0,0,0,0,0.790839983952838,1.21991680276109,1.83609079397062,1.25452977608681,2.40198820120795,1.07891477107857,0.826534557253359,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0.129159823477731,0.337912250981556,0.352071715937262,1.17183946359555,0.524296722128554,0,0,0,0.405450430580328,0.308132871494482,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0,0.116876902181569,0,0,0,0,0.772758376128762,0.93841237725591,0.73260649706906,0.428736758158132,1.50471631210609,55.9104324190896,49.2548003062679,53.2792827498639,77.1620788723157,27.4033007908257,30.215755895588,46.5765525159946,38.2773022740587,32.6262534468627,31.583379016861,0.830298780673413,3.19219898720825,4.60980735536162,7.29320151204882,5.65955539095552,6.80220981265052,4.4449345560323,6.18105171716683,3.85103051510178,6.06473308233114,3.54871019846336,5.09291121742406,6.9294715527713,7.61899313617944,7.75378830900779,7.1444053692461,4.86714168968393,6.17309505483856,4.12085900803307,3.82717192349433,3.77156177623957,5.50174999093946,3.09967046931517,4.50573891560218,4.23492211868988,5.4153349050673,4.57319932181931,5.26139422875686,5.56796866768033,1.68342681497322,4.03359061622192,4.13718825977367,4.50154147486658,6.8172210121825,3.66522560864169,12.2407183189594,4.21076895201735,3.43793686477277,2.86932498103265,0.661774257358546,1.15933917810211
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,30.1451526680801,33.8554226734101,33.5930643858275,0,0,0,0,0,0.299600110518405,0.384218305321555,25.9224030771194,23.2210213930508,19.7705463670299,26.5655415495537,23.6329338818226,21.5583806618319,18.4981759065196,24.8189072384706,6.60695285996332,36.5185786923637,23.0409799884365,20.5742608859102,31.929187617241,32.2966289745191,20.3803589271008,18.5711661310454,22.1557459276375,26.5165726926301,35.8776635613739,22.5543329448614,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.742210695324124,2.08182392119363,2.13125834818499,0.922461989024234,3.46662073271032,2.3517741427141,0.251333182659351,0,0.289198713839823,0,0.808834249737046,0,0.969750506270444,0,26.0574909340277,32.673686262899,0,0,0,0,16.7765516133401,42.0900554593136,37.3193425775207,53.3640662990289,42.9601968314955,23.0644729461112,32.123770087416,1.2220723662038,0,0,1.05220927943237,0.260240885925407,0.919608417733892,2.16074555766419,3.91832526372859,3.81004395247436,2.69038812598185,3.74806898238915,1.03481348295606,0,0,1.05570674498369,1.09597866213787,0.834141747676794,2.089512999133,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,64.7693041577512,28.9161960785789,0,0,1.91959425481711,0.464473343720877,1.67527699718721,1.4117846723634,1.55664630691409,0.190225626112559,0.949058123089023,1.15289268306808,0.502670417600539,1.79060824837036,0.38992817423824,0,0.432276099749388,0.199141273254367,0.569003702859245,0.456994050438915,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.814824882210129,0,0.469380496577004,0.502518772325447,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,14.6101036888891,12.5416504653657,0,0.252470927204373,0,1.17131623288992,2.15423397732799,0.238968797952552,2.45078541490634,0.849229592366497,0,1.16902343164525,1.18586333383957,20.5645642509957,0.99358059645788,2.13678724400706,0.977321756121456,2.96946221350564,0,0.971122544619926,1.209294227859,0.377210159511796,0.590603785761546,1.22974059177571,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.214337035031592,0.709360934569094,2.67553226403106,3.1264313914403,3.04464949114599,0,0.42366414172764,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.820704498725306,0.291480836629851,16.5028518789354,0,0.412773735926445,0,0,0.27338845544205,0,0,0,0,0,0.790839983952838,1.21991680276109,1.83609079397062,1.25452977608681,2.40198820120795,1.07891477107857,0.826534557253359,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0.129159823477731,0.337912250981556,0.352071715937262,1.17183946359555,0.524296722128554,0,0,0,0.405450430580328,0.308132871494482,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0,0.116876902181569,0,0,0,0,0.772758376128762,0.93841237725591,0.73260649706906,0.428736758158132,1.50471631210609,55.9104324190896,49.2548003062679,53.2792827498639,77.1620788723157,27.4033007908257,30.215755895588,46.5765525159946,38.2773022740587,32.6262534468627,31.583379016861,0.830298780673413,3.19219898720825,4.60980735536162,7.29320151204882,5.65955539095552,6.80220981265052,4.4449345560323,6.18105171716683,3.85103051510178,6.06473308233114,3.54871019846336,5.09291121742406,6.9294715527713,7.61899313617944,7.75378830900779,7.1444053692461,4.86714168968393,6.17309505483856,4.12085900803307,3.82717192349433,3.77156177623957,5.50174999093946,3.09967046931517,4.50573891560218,4.23492211868988,5.4153349050673,4.57319932181931,5.26139422875686,5.56796866768033,1.68342681497322,4.03359061622192,4.13718825977367,4.50154147486658,6.8172210121825,3.66522560864169,12.2407183189594,4.21076895201735,3.43793686477277,2.86932498103265,0.661774257358546,1.15933917810211
|short_description=p2@Jph4
}}
}}

Latest revision as of 03:27, 26 September 2015

Short description:p2@Jph4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Jph4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -6bp_to_ENSMUST00000133954_5end
EntrezGene:Jph4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Jph4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C330.15
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D624.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.04
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.55
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B226.06
cerebellum, neonate N30.CNhs11135.1395-42I232.67
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.78
corpus striatum, adult.CNhs10487.19-21D842.09
corpus striatum, neonate N00.CNhs11226.630-43F137.32
cortex, adult.CNhs10473.12-14D553.36
cortex, neonate N30.CNhs11107.1392-42F242.96
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B232.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C63.81
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E864.77
hippocampus, neonate N00.CNhs11228.627-43G128.92
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.61
medulla oblongata, neonate N30.CNhs11200.1396-42A312.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C916.50
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A249.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D777.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.04e-1823
neuroblast (sensu Vertebrata)2.04e-1823
neuron2.38e-1433
neuronal stem cell2.38e-1433
neuroblast2.38e-1433
electrically signaling cell2.38e-1433
electrically responsive cell1.46e-1039
electrically active cell1.46e-1039
neural cell1.09e-0843
ectodermal cell2.79e-0844
neurectodermal cell2.79e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.16e-2754
neurectoderm4.95e-2664
neural plate4.95e-2664
presumptive neural plate4.95e-2664
central nervous system6.69e-2673
neural tube1.38e-2552
neural rod1.38e-2552
future spinal cord1.38e-2552
neural keel1.38e-2552
gray matter2.51e-2534
nervous system1.27e-2475
brain1.51e-2147
future brain1.51e-2147
brain grey matter3.37e-2129
regional part of telencephalon3.37e-2129
telencephalon3.37e-2129
regional part of brain7.74e-2146
ecto-epithelium2.55e-2073
ectoderm-derived structure2.93e-2095
ectoderm2.93e-2095
presumptive ectoderm2.93e-2095
pre-chordal neural plate4.84e-2049
anterior neural tube1.61e-1940
regional part of forebrain7.44e-1939
forebrain7.44e-1939
future forebrain7.44e-1939
structure with developmental contribution from neural crest7.12e-1592
cerebral cortex7.67e-1521
cerebral hemisphere7.67e-1521
pallium7.67e-1521
regional part of cerebral cortex9.37e-1217
occipital lobe2.05e-1010
visual cortex2.05e-1010
neocortex2.05e-1010
basal ganglion1.55e-078
nuclear complex of neuraxis1.55e-078
aggregate regional part of brain1.55e-078
collection of basal ganglia1.55e-078
cerebral subcortex1.55e-078
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