FFCP PHASE1:Mm9::chr7:148246861..148246945,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330671 | |EntrezGene=330671 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q766D5 | |UniProt=Q766D5 | ||
|association_with_transcript=-227bp_to_ENSMUST00000048002,NM_177897,uc009kje.1_5end | |association_with_transcript=-227bp_to_ENSMUST00000048002,NM_177897,uc009kje.1_5end | ||
|cluster_id=chr7:148246861..148246945,+ | |||
|description=CAGE_peak_1_at_B4galnt4_5end | |description=CAGE_peak_1_at_B4galnt4_5end | ||
|id=chr7:148246861..148246945,+ | |id=chr7:148246861..148246945,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.09e-15!33;CL:0000047!9.09e-15!33;CL:0000031!9.09e-15!33;CL:0000404!9.09e-15!33;CL:0000117!1.41e-13!23;CL:0000337!1.41e-13!23;CL:0000221!1.07e-09!44;CL:0000133!1.07e-09!44;CL:0002319!1.56e-09!43;CL:0000393!3.45e-09!39;CL:0000211!3.45e-09!39 | |ontology_enrichment_celltype=CL:0000540!9.09e-15!33;CL:0000047!9.09e-15!33;CL:0000031!9.09e-15!33;CL:0000404!9.09e-15!33;CL:0000117!1.41e-13!23;CL:0000337!1.41e-13!23;CL:0000221!1.07e-09!44;CL:0000133!1.07e-09!44;CL:0002319!1.56e-09!43;CL:0000393!3.45e-09!39;CL:0000211!3.45e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.24e-15,33;CL:0000047,3.24e-15,33;CL:0000031,3.24e-15,33;CL:0000404,3.24e-15,33;CL:0000117,5.53e-14,23;CL:0000337,5.53e-14,23;CL:0000393,7.81e-10,39;CL:0000211,7.81e-10,39;CL:0000221,1.25e-09,44;CL:0000133,1.25e-09,44;CL:0002319,1.84e-09,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-26!73;UBERON:0005743!2.98e-26!73;UBERON:0000073!8.71e-25!75;UBERON:0001016!8.71e-25!75;UBERON:0002346!7.02e-23!71;UBERON:0003075!7.02e-23!71;UBERON:0007284!7.02e-23!71;UBERON:0000033!6.37e-22!63;UBERON:0001049!1.30e-21!52;UBERON:0005068!1.30e-21!52;UBERON:0006241!1.30e-21!52;UBERON:0007135!1.30e-21!52;UBERON:0004121!2.24e-21!102;UBERON:0000924!2.24e-21!102;UBERON:0006601!2.24e-21!102;UBERON:0003056!9.91e-21!49;UBERON:0000955!1.36e-20!50;UBERON:0006238!1.36e-20!50;UBERON:0002616!4.09e-20!49;UBERON:0003080!3.20e-18!40;UBERON:0002780!1.21e-17!39;UBERON:0001890!1.21e-17!39;UBERON:0006240!1.21e-17!39;UBERON:0002020!5.33e-16!34;UBERON:0000153!9.02e-14!94;UBERON:0002791!1.32e-13!29;UBERON:0003528!1.32e-13!29;UBERON:0001893!1.32e-13!29;UBERON:0007811!7.88e-12!86;UBERON:0000956!2.14e-09!21;UBERON:0001869!2.14e-09!21;UBERON:0000203!2.14e-09!21;UBERON:0002619!5.21e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!2.98e-26!73;UBERON:0005743!2.98e-26!73;UBERON:0000073!8.71e-25!75;UBERON:0001016!8.71e-25!75;UBERON:0002346!7.02e-23!71;UBERON:0003075!7.02e-23!71;UBERON:0007284!7.02e-23!71;UBERON:0000033!6.37e-22!63;UBERON:0001049!1.30e-21!52;UBERON:0005068!1.30e-21!52;UBERON:0006241!1.30e-21!52;UBERON:0007135!1.30e-21!52;UBERON:0004121!2.24e-21!102;UBERON:0000924!2.24e-21!102;UBERON:0006601!2.24e-21!102;UBERON:0003056!9.91e-21!49;UBERON:0000955!1.36e-20!50;UBERON:0006238!1.36e-20!50;UBERON:0002616!4.09e-20!49;UBERON:0003080!3.20e-18!40;UBERON:0002780!1.21e-17!39;UBERON:0001890!1.21e-17!39;UBERON:0006240!1.21e-17!39;UBERON:0002020!5.33e-16!34;UBERON:0000153!9.02e-14!94;UBERON:0002791!1.32e-13!29;UBERON:0003528!1.32e-13!29;UBERON:0001893!1.32e-13!29;UBERON:0007811!7.88e-12!86;UBERON:0000956!2.14e-09!21;UBERON:0001869!2.14e-09!21;UBERON:0000203!2.14e-09!21;UBERON:0002619!5.21e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.20e-27,73;UBERON:0002346,3.23e-25,64;UBERON:0003075,3.23e-25,64;UBERON:0007284,3.23e-25,64;UBERON:0001016,4.11e-25,75;UBERON:0000073,3.87e-23,54;UBERON:0004121,5.91e-23,95;UBERON:0000924,5.91e-23,95;UBERON:0006601,5.91e-23,95;UBERON:0010371,3.99e-22,73;UBERON:0001049,5.26e-22,52;UBERON:0005068,5.26e-22,52;UBERON:0006241,5.26e-22,52;UBERON:0007135,5.26e-22,52;UBERON:0003056,4.32e-21,49;UBERON:0000955,1.98e-19,47;UBERON:0006238,1.98e-19,47;UBERON:0002616,6.04e-19,46;UBERON:0003080,1.72e-18,40;UBERON:0002780,6.79e-18,39;UBERON:0001890,6.79e-18,39;UBERON:0006240,6.79e-18,39;UBERON:0002020,3.42e-16,34;UBERON:0003528,1.00e-13,29;UBERON:0002791,1.00e-13,29;UBERON:0001893,1.00e-13,29;UBERON:0010314,1.10e-12,92;UBERON:0000956,2.18e-09,21;UBERON:0001869,2.18e-09,21;UBERON:0000203,2.18e-09,21;UBERON:0002619,6.09e-07,17 | |||
|phase1_expression=16.1750335575842,1.74487703819681,1.81999695755814,3.32710632437513,7.01254021924886,5.54001597309236,6.77476657727024,3.22808308603941,0.703943610758334,0.234064526321993,1.36974374580404,2.6324812468461,0,0.262261207256992,1.99865857089398,1.61980213911861,0.699561878128147,0.157731082679119,0.137114433605739,0,5.01755411891312,4.0709289992363,1.82839852397255,3.19984845586813,5.27641346454491,1.72269589234506,4.30761996159075,2.80112602491656,11.2113817479261,9.8291750606373,7.76056787293567,10.1604907753541,9.22597181376855,0,7.22129049378186,8.97667084935859,5.51257261908397,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,1.56478268869608,1.30815093828268,0.659058548203415,0.194429899074283,1.53985063787899,0,0.167782606057736,2.17608642603403,0.336093799142464,0,0,0,39.6540263284812,51.3121249893872,45.0020296489387,0.677689064138264,0.889294796111139,0,0,0.7104801149461,4.79360176829448,9.98967593836042,34.2175720617976,36.8566211645515,36.8068682364919,23.1377297367081,20.5407743085001,33.8074605833273,34.0251422114739,42.284064184061,22.0231761998777,26.3035916455487,20.2760623898241,48.270381309251,41.6268778390964,34.3802824567462,15.6342479440773,16.3201156909187,20.0165704587621,26.2219441071564,19.0778052270798,32.0607046819517,0.454357159999104,0.604572480854284,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,9.01397886570755,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,1.94112595522402,0.776813650941515,0.742210695324124,10.7560902595004,6.08930956624282,4.84292544237723,4.82312449768392,3.05730638552832,0.502666365318702,0.247194967734374,0.144599356919912,0.884610551949874,0.970601099684455,0,0,0,23.4224637609238,23.0391377494801,6.64188343542338,0.11981512450592,1.19980546198682,0.254140454146129,27.5614776504874,31.1100409916666,82.1779462818133,34.591039718263,39.1244649715406,27.0124457927428,30.1768749306029,8.1471491080253,0.497627882440372,8.08712826987759,2.31486041475121,31.7493880828997,23.4500146522142,22.5077662256687,13.2620239695429,17.5534167810426,17.039124797885,14.2426621330788,7.50239775143145,33.8441748904562,29.311442426012,34.1345180878061,23.0155519048954,15.2925987074079,7.66154766348766,3.90986059175093,16.1217756122979,0,0,0,6.21377317606506,4.22146907965973,2.52086886045421,3.07768156260773,0.393528463494808,0.308534225774757,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0,34.2772616159527,57.9352967695371,3.30418782983798,5.55346189993443,25.3813018136928,13.9342003116263,11.0826016737,6.25218926332362,6.67134131534611,4.75564065281398,6.64340686162316,4.11747386810027,3.2673577144035,1.98956472041151,2.14460495831032,5.39291645192533,3.8904848977445,2.78797782556114,24.8464950248537,14.0525670509966,12.3978509240388,10.1825663922657,10.2794818198842,8.83711330618014,1.20149420536089,0,0,0,0,3.33690211432188,2.35870794135844,0.449724224769707,0,0.241177159752417,0,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.739012760666419,21.4125295300648,14.8298128562244,7.97801903143384,4.92849521405854,2.01007508930179,0.714130922658041,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,16.8578119487182,15.2375192569864,0.983609672260053,0.252470927204373,6.94118082715765,7.41833614163613,12.4945570685023,8.60287672629187,9.13474563737816,8.49229592366497,12.5491317519217,11.1057226006299,11.8586333383957,22.1711708331047,1.27746076687442,17.8065603667255,12.2165219515182,4.12425307431339,2.65490276679926,16.5090832585387,11.7906187216253,5.28094223316515,9.7449624650655,12.604841065701,6.46070732920553,2.90826983582004,4.9909632973861,4.42451461110142,2.10837217149998,0,11.9153862013826,25.0284920703521,27.0359649105957,21.6480405381908,13.3005175231705,14.8046118609719,12.8348236069654,15.8321773539592,2.3467170806371,1.0591603543191,0,1.48397627647332,1.61464426695906,2.77439454669517,4.05865969610664,4.43180429311665,4.37221254944776,17.2445530869774,1.87957968877638,4.74689796315412,0.740778109478847,0.565105371014073,0.956859594047176,1.14389086603261,1.86976272993241,1.81936888020755,1.65839968565309,0.954670618015114,36.5368072586211,11.9958485604841,4.86024033698106,5.43629569637619,2.18362563746178,1.07891477107857,1.48776220305605,0.26175594198403,2.46268449254406,0,0,8.22341003241883,7.61109056102649,5.44463327363333,5.42471258606471,3.04121025883401,1.87771581833206,4.4269490846943,2.62148361064277,0.483168241652012,0,0.316011120628178,11.7580624868295,8.01145465885653,6.10627867995637,4.47566739168704,3.57626438606277,2.04332264183947,1.18151621739662,0.706765149637033,0.533447646584999,0.705783295957884,0.292373642219257,0.481059208201647,0.467507608726276,0.453460767230423,3.55177525398503,0.62799699626633,3.52557694364565,0.772758376128762,0.375364950902364,2.19781949120718,3.00115730710692,0,32.1908550291728,23.9369122983732,27.498984645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| |phase1_expression=16.1750335575842,1.74487703819681,1.81999695755814,3.32710632437513,7.01254021924886,5.54001597309236,6.77476657727024,3.22808308603941,0.703943610758334,0.234064526321993,1.36974374580404,2.6324812468461,0,0.262261207256992,1.99865857089398,1.61980213911861,0.699561878128147,0.157731082679119,0.137114433605739,0,5.01755411891312,4.0709289992363,1.82839852397255,3.19984845586813,5.27641346454491,1.72269589234506,4.30761996159075,2.80112602491656,11.2113817479261,9.8291750606373,7.76056787293567,10.1604907753541,9.22597181376855,0,7.22129049378186,8.97667084935859,5.51257261908397,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,1.56478268869608,1.30815093828268,0.659058548203415,0.194429899074283,1.53985063787899,0,0.167782606057736,2.17608642603403,0.336093799142464,0,0,0,39.6540263284812,51.3121249893872,45.0020296489387,0.677689064138264,0.889294796111139,0,0,0.7104801149461,4.79360176829448,9.98967593836042,34.2175720617976,36.8566211645515,36.8068682364919,23.1377297367081,20.5407743085001,33.8074605833273,34.0251422114739,42.284064184061,22.0231761998777,26.3035916455487,20.2760623898241,48.270381309251,41.6268778390964,34.3802824567462,15.6342479440773,16.3201156909187,20.0165704587621,26.2219441071564,19.0778052270798,32.0607046819517,0.454357159999104,0.604572480854284,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,9.01397886570755,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,1.94112595522402,0.776813650941515,0.742210695324124,10.7560902595004,6.08930956624282,4.84292544237723,4.82312449768392,3.05730638552832,0.502666365318702,0.247194967734374,0.144599356919912,0.884610551949874,0.970601099684455,0,0,0,23.4224637609238,23.0391377494801,6.64188343542338,0.11981512450592,1.19980546198682,0.254140454146129,27.5614776504874,31.1100409916666,82.1779462818133,34.591039718263,39.1244649715406,27.0124457927428,30.1768749306029,8.1471491080253,0.497627882440372,8.08712826987759,2.31486041475121,31.7493880828997,23.4500146522142,22.5077662256687,13.2620239695429,17.5534167810426,17.039124797885,14.2426621330788,7.50239775143145,33.8441748904562,29.311442426012,34.1345180878061,23.0155519048954,15.2925987074079,7.66154766348766,3.90986059175093,16.1217756122979,0,0,0,6.21377317606506,4.22146907965973,2.52086886045421,3.07768156260773,0.393528463494808,0.308534225774757,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0,34.2772616159527,57.9352967695371,3.30418782983798,5.55346189993443,25.3813018136928,13.9342003116263,11.0826016737,6.25218926332362,6.67134131534611,4.75564065281398,6.64340686162316,4.11747386810027,3.2673577144035,1.98956472041151,2.14460495831032,5.39291645192533,3.8904848977445,2.78797782556114,24.8464950248537,14.0525670509966,12.3978509240388,10.1825663922657,10.2794818198842,8.83711330618014,1.20149420536089,0,0,0,0,3.33690211432188,2.35870794135844,0.449724224769707,0,0.241177159752417,0,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0.739012760666419,21.4125295300648,14.8298128562244,7.97801903143384,4.92849521405854,2.01007508930179,0.714130922658041,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,16.8578119487182,15.2375192569864,0.983609672260053,0.252470927204373,6.94118082715765,7.41833614163613,12.4945570685023,8.60287672629187,9.13474563737816,8.49229592366497,12.5491317519217,11.1057226006299,11.8586333383957,22.1711708331047,1.27746076687442,17.8065603667255,12.2165219515182,4.12425307431339,2.65490276679926,16.5090832585387,11.7906187216253,5.28094223316515,9.7449624650655,12.604841065701,6.46070732920553,2.90826983582004,4.9909632973861,4.42451461110142,2.10837217149998,0,11.9153862013826,25.0284920703521,27.0359649105957,21.6480405381908,13.3005175231705,14.8046118609719,12.8348236069654,15.8321773539592,2.3467170806371,1.0591603543191,0,1.48397627647332,1.61464426695906,2.77439454669517,4.05865969610664,4.43180429311665,4.37221254944776,17.2445530869774,1.87957968877638,4.74689796315412,0.740778109478847,0.565105371014073,0.956859594047176,1.14389086603261,1.86976272993241,1.81936888020755,1.65839968565309,0.954670618015114,36.5368072586211,11.9958485604841,4.86024033698106,5.43629569637619,2.18362563746178,1.07891477107857,1.48776220305605,0.26175594198403,2.46268449254406,0,0,8.22341003241883,7.61109056102649,5.44463327363333,5.42471258606471,3.04121025883401,1.87771581833206,4.4269490846943,2.62148361064277,0.483168241652012,0,0.316011120628178,11.7580624868295,8.01145465885653,6.10627867995637,4.47566739168704,3.57626438606277,2.04332264183947,1.18151621739662,0.706765149637033,0.533447646584999,0.705783295957884,0.292373642219257,0.481059208201647,0.467507608726276,0.453460767230423,3.55177525398503,0.62799699626633,3.52557694364565,0.772758376128762,0.375364950902364,2.19781949120718,3.00115730710692,0,32.1908550291728,23.9369122983732,27.498984645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| ||
|short_description=p1@B4galnt4 | |short_description=p1@B4galnt4 | ||
}} | }} |
Latest revision as of 03:24, 26 September 2015
Short description: | p1@B4galnt4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B4galnt4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -227bp_to_ENSMUST00000048002, NM_177897, uc009kje.1_5end |
EntrezGene: | B4galnt4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.24e-15 | 33 |
neuronal stem cell | 3.24e-15 | 33 |
neuroblast | 3.24e-15 | 33 |
electrically signaling cell | 3.24e-15 | 33 |
CNS neuron (sensu Vertebrata) | 5.53e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.53e-14 | 23 |
electrically responsive cell | 7.81e-10 | 39 |
electrically active cell | 7.81e-10 | 39 |
ectodermal cell | 1.25e-09 | 44 |
neurectodermal cell | 1.25e-09 | 44 |
neural cell | 1.84e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.20e-27 | 73 |
neurectoderm | 3.23e-25 | 64 |
neural plate | 3.23e-25 | 64 |
presumptive neural plate | 3.23e-25 | 64 |
nervous system | 4.11e-25 | 75 |
regional part of nervous system | 3.87e-23 | 54 |
ectoderm-derived structure | 5.91e-23 | 95 |
ectoderm | 5.91e-23 | 95 |
presumptive ectoderm | 5.91e-23 | 95 |
ecto-epithelium | 3.99e-22 | 73 |
neural tube | 5.26e-22 | 52 |
neural rod | 5.26e-22 | 52 |
future spinal cord | 5.26e-22 | 52 |
neural keel | 5.26e-22 | 52 |
pre-chordal neural plate | 4.32e-21 | 49 |
brain | 1.98e-19 | 47 |
future brain | 1.98e-19 | 47 |
regional part of brain | 6.04e-19 | 46 |
anterior neural tube | 1.72e-18 | 40 |
regional part of forebrain | 6.79e-18 | 39 |
forebrain | 6.79e-18 | 39 |
future forebrain | 6.79e-18 | 39 |
gray matter | 3.42e-16 | 34 |
brain grey matter | 1.00e-13 | 29 |
regional part of telencephalon | 1.00e-13 | 29 |
telencephalon | 1.00e-13 | 29 |
structure with developmental contribution from neural crest | 1.10e-12 | 92 |
cerebral cortex | 2.18e-09 | 21 |
cerebral hemisphere | 2.18e-09 | 21 |
pallium | 2.18e-09 | 21 |
regional part of cerebral cortex | 6.09e-07 | 17 |