FFCP PHASE1:Mm9::chr5:65726836..65726918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19687 | |EntrezGene=19687 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=364 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8Z6,E9PX26,G3UWX1,Q5U4B1,G3UZ76,P35601 | |UniProt=G3X8Z6,E9PX26,G3UWX1,Q5U4B1,G3UZ76,P35601 | ||
|association_with_transcript=0bp_to_ENSMUST00000031092,ENSMUST00000163403,ENSMUST00000172660,ENSMUST00000172732,ENSMUST00000173451,ENSMUST00000173994,NM_011258,uc008xni.2,uc008xnj.2,uc008xnk.2,uc008xnl.2_5end | |association_with_transcript=0bp_to_ENSMUST00000031092,ENSMUST00000163403,ENSMUST00000172660,ENSMUST00000172732,ENSMUST00000173451,ENSMUST00000173994,NM_011258,uc008xni.2,uc008xnj.2,uc008xnk.2,uc008xnl.2_5end | ||
|cluster_id=chr5:65726836..65726918,- | |||
|description=CAGE_peak_1_at_Rfc1_5end | |description=CAGE_peak_1_at_Rfc1_5end | ||
|id=chr5:65726836..65726918,- | |id=chr5:65726836..65726918,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.43e-11!193;UBERON:0004120!8.43e-11!193;UBERON:0006603!8.43e-11!193;UBERON:0001048!2.12e-10!147;UBERON:0000991!3.94e-07!18;UBERON:0005564!3.94e-07!18;UBERON:0002323!6.46e-07!37;UBERON:0004458!6.46e-07!37;UBERON:0002553!6.91e-07!39;UBERON:0003886!9.64e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.47e-10,134;UBERON:0000926,5.46e-09,120;UBERON:0004120,5.46e-09,120;UBERON:0006603,5.46e-09,120;UBERON:0000991,3.94e-07,18;UBERON:0005564,3.94e-07,18;UBERON:0002323,6.46e-07,37;UBERON:0004458,6.46e-07,37;UBERON:0002553,6.91e-07,39;UBERON:0003886,9.64e-07,38 | |||
|phase1_expression=28.1861970904437,2.44282785347553,1.36499771816861,6.65421264875026,4.00716583957078,23.6709773395765,24.2957146219347,30.6022276556536,6.05391505252167,6.08567768437183,16.4369249496485,17.549874978974,31.6721350372731,35.055581370018,45.9691471305615,51.6311931844056,37.7763414189199,56.1522654337663,61.0159229545538,32.2536135366503,43.5421645573477,49.2483117956391,51.9787580386481,15.0392877425802,10.3234176480227,4.01962374880514,6.8921919385452,11.4199753323521,19.0023419456374,18.3981994724749,13.7472916606289,11.4305521222734,16.6067492647834,0,30.6182716936351,23.4390849955474,28.9920485892564,50.2237956884289,42.973443948809,50.7818031654584,41.764435650202,31.4200923080885,47.5800145970531,27.697299954627,30.2103255034153,30.6523076110008,7.04152209913235,7.84890562969608,4.83309602015838,8.74934545834275,8.53917171914711,2.87505128729943,48.992520968859,26.8383992544197,40.3312558970957,21.8670520630555,32.0917452731408,19.0798674142654,8.49729135610311,12.6957835025288,6.97214543856797,3.72728985276045,3.55717918444456,9.89889689009539,6.92206453796882,6.3943210345149,6.89080254192331,9.60545763303886,21.1526809109294,9.18040380655497,13.6711224878398,10.5690864229407,8.83474163806454,15.8013130987291,15.7186572469908,11.9498442259303,23.1243350098716,27.4527776883154,27.4955694528676,9.10015385338338,9.14876436024097,8.33461392890816,13.1216009530649,23.0732670112989,26.8924916087186,18.2669722993674,24.6303007782448,15.2847545576746,29.230310626609,40.2796415369167,34.4938741554997,12.0459342777394,7.47968467078526,20.5087212822371,20.1430689408777,23.2973981290615,33.2853275712252,28.6322941931137,25.9786004602869,19.4336765980687,21.5490432258321,23.0987659345772,53.5091003383956,28.4426681261332,22.9480503471887,21.5355885653834,23.25412447068,27.4041311325744,104.869842877105,35.4776712364931,36.9523746011869,33.7956680926477,36.4372485664572,39.6400544653397,44.4485312972964,34.8096457983201,23.2363269670311,49.16378135277,40.6920853896942,46.4270859349064,49.0268170982074,52.8514025917392,16.775258509631,35.4264764383972,29.7414323675106,24.7793343552334,52.7186547826049,39.5935802455649,45.4911412921572,25.9137806170343,21.9600289352941,17.4659549436882,30.0716073932638,24.8043993610421,30.7526305948149,26.76980840618,50.4104851059066,44.7865094196335,36.8975227313165,37.0377666360194,66.1011850250535,36.0946303960553,50.9575827349138,46.8691983469074,45.1762354364817,47.5301902256793,31.5774811766286,36.9945820156792,56.6943821413375,72.6167347844426,64.7500136923332,49.9766269934871,69.5118123063995,57.1133553096353,52.2686626476176,61.3025541800959,54.7726286104323,46.8373190948782,43.4770154075257,46.3961730479524,49.9540507759735,44.2952671194097,54.4512891845984,44.6654806066607,51.9880170430465,46.5067889500816,39.1679166043444,38.1822669540644,45.5830784260341,37.4301818100337,34.9406569142638,34.0645970701024,39.5190207523891,37.5777972529041,27.5479832619007,24.6971069710283,14.5384264512871,25.9161555330273,61.6403044046826,60.381534683714,63.0161885865036,44.168691892512,37.1371333220933,32.7188076913602,27.5226855695817,28.6576181219779,25.8875265064278,32.2309484706664,33.9237511587269,32.357498711552,33.0691216308282,25.8883655230677,19.7254616991205,61.922693834473,55.2267904798094,55.5968125017708,50.6215991507503,43.0633934126556,38.8904703314182,38.6738587706558,32.3417379353232,24.8028299482819,19.5658733877518,60.23108316351,48.5500717929611,62.5116672429893,64.7123787229324,46.5471918322164,32.3374831762403,40.2774592431135,38.7503191992335,41.4587733914003,81.9478777205921,41.3076451912039,31.5158049845706,36.3713584243841,37.1352645990358,17.3679667690812,41.7542209776527,50.2152241191785,64.8600606239263,64.3333875087963,59.1419425687025,50.5868897474284,36.1826334146741,27.9041116436652,51.3890569786183,47.6149082744866,41.7771493882616,34.7390227197365,35.7457912462404,33.8478797080737,40.7136466636035,34.8099637643974,48.6846630288846,37.2514607511389,28.4174544278392,29.3029216480508,41.8034110710522,25.4995636476417,40.7005603046971,36.701241963884,39.637905182835,37.9960388744558,39.2125666385014,37.3661020641259,41.2906915708392,34.1939353756235,29.2512955680427,39.2012006034605,49.679029822894,43.4480072948103,56.3588879363373,39.5928295134085,25.2215762845929,44.4288564163616,38.3950917345234,39.0412515094709,23.328849537581,43.3483558600938,27.1349707826632,46.1687836436432,47.7706487035527,40.7687417737203,29.5172104009997,25.7838858120467,38.1292358444243,54.558511491487,23.4139217646786,44.3677662515396,42.9163365414302,36.2088699732203,38.6690198414984,15.22324745573,34.4967410853654,22.4541995115649,32.8587313101893,51.2796246648003,51.0227588359062,54.4022582851966,37.1247989849754,39.0655341393246,27.399198643206,32.6348531538497,55.7039071401,49.9456220470998,52.7804403003678,79.3031203989749,94.5924055829494,60.1686595533155,50.1436368481873,55.7006780248159,51.6867902028545,18.1387417422872,64.0580387001799,57.74272866402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| |phase1_expression=28.1861970904437,2.44282785347553,1.36499771816861,6.65421264875026,4.00716583957078,23.6709773395765,24.2957146219347,30.6022276556536,6.05391505252167,6.08567768437183,16.4369249496485,17.549874978974,31.6721350372731,35.055581370018,45.9691471305615,51.6311931844056,37.7763414189199,56.1522654337663,61.0159229545538,32.2536135366503,43.5421645573477,49.2483117956391,51.9787580386481,15.0392877425802,10.3234176480227,4.01962374880514,6.8921919385452,11.4199753323521,19.0023419456374,18.3981994724749,13.7472916606289,11.4305521222734,16.6067492647834,0,30.6182716936351,23.4390849955474,28.9920485892564,50.2237956884289,42.973443948809,50.7818031654584,41.764435650202,31.4200923080885,47.5800145970531,27.697299954627,30.2103255034153,30.6523076110008,7.04152209913235,7.84890562969608,4.83309602015838,8.74934545834275,8.53917171914711,2.87505128729943,48.992520968859,26.8383992544197,40.3312558970957,21.8670520630555,32.0917452731408,19.0798674142654,8.49729135610311,12.6957835025288,6.97214543856797,3.72728985276045,3.55717918444456,9.89889689009539,6.92206453796882,6.3943210345149,6.89080254192331,9.60545763303886,21.1526809109294,9.18040380655497,13.6711224878398,10.5690864229407,8.83474163806454,15.8013130987291,15.7186572469908,11.9498442259303,23.1243350098716,27.4527776883154,27.4955694528676,9.10015385338338,9.14876436024097,8.33461392890816,13.1216009530649,23.0732670112989,26.8924916087186,18.2669722993674,24.6303007782448,15.2847545576746,29.230310626609,40.2796415369167,34.4938741554997,12.0459342777394,7.47968467078526,20.5087212822371,20.1430689408777,23.2973981290615,33.2853275712252,28.6322941931137,25.9786004602869,19.4336765980687,21.5490432258321,23.0987659345772,53.5091003383956,28.4426681261332,22.9480503471887,21.5355885653834,23.25412447068,27.4041311325744,104.869842877105,35.4776712364931,36.9523746011869,33.7956680926477,36.4372485664572,39.6400544653397,44.4485312972964,34.8096457983201,23.2363269670311,49.16378135277,40.6920853896942,46.4270859349064,49.0268170982074,52.8514025917392,16.775258509631,35.4264764383972,29.7414323675106,24.7793343552334,52.7186547826049,39.5935802455649,45.4911412921572,25.9137806170343,21.9600289352941,17.4659549436882,30.0716073932638,24.8043993610421,30.7526305948149,26.76980840618,50.4104851059066,44.7865094196335,36.8975227313165,37.0377666360194,66.1011850250535,36.0946303960553,50.9575827349138,46.8691983469074,45.1762354364817,47.5301902256793,31.5774811766286,36.9945820156792,56.6943821413375,72.6167347844426,64.7500136923332,49.9766269934871,69.5118123063995,57.1133553096353,52.2686626476176,61.3025541800959,54.7726286104323,46.8373190948782,43.4770154075257,46.3961730479524,49.9540507759735,44.2952671194097,54.4512891845984,44.6654806066607,51.9880170430465,46.5067889500816,39.1679166043444,38.1822669540644,45.5830784260341,37.4301818100337,34.9406569142638,34.0645970701024,39.5190207523891,37.5777972529041,27.5479832619007,24.6971069710283,14.5384264512871,25.9161555330273,61.6403044046826,60.381534683714,63.0161885865036,44.168691892512,37.1371333220933,32.7188076913602,27.5226855695817,28.6576181219779,25.8875265064278,32.2309484706664,33.9237511587269,32.357498711552,33.0691216308282,25.8883655230677,19.7254616991205,61.922693834473,55.2267904798094,55.5968125017708,50.6215991507503,43.0633934126556,38.8904703314182,38.6738587706558,32.3417379353232,24.8028299482819,19.5658733877518,60.23108316351,48.5500717929611,62.5116672429893,64.7123787229324,46.5471918322164,32.3374831762403,40.2774592431135,38.7503191992335,41.4587733914003,81.9478777205921,41.3076451912039,31.5158049845706,36.3713584243841,37.1352645990358,17.3679667690812,41.7542209776527,50.2152241191785,64.8600606239263,64.3333875087963,59.1419425687025,50.5868897474284,36.1826334146741,27.9041116436652,51.3890569786183,47.6149082744866,41.7771493882616,34.7390227197365,35.7457912462404,33.8478797080737,40.7136466636035,34.8099637643974,48.6846630288846,37.2514607511389,28.4174544278392,29.3029216480508,41.8034110710522,25.4995636476417,40.7005603046971,36.701241963884,39.637905182835,37.9960388744558,39.2125666385014,37.3661020641259,41.2906915708392,34.1939353756235,29.2512955680427,39.2012006034605,49.679029822894,43.4480072948103,56.3588879363373,39.5928295134085,25.2215762845929,44.4288564163616,38.3950917345234,39.0412515094709,23.328849537581,43.3483558600938,27.1349707826632,46.1687836436432,47.7706487035527,40.7687417737203,29.5172104009997,25.7838858120467,38.1292358444243,54.558511491487,23.4139217646786,44.3677662515396,42.9163365414302,36.2088699732203,38.6690198414984,15.22324745573,34.4967410853654,22.4541995115649,32.8587313101893,51.2796246648003,51.0227588359062,54.4022582851966,37.1247989849754,39.0655341393246,27.399198643206,32.6348531538497,55.7039071401,49.9456220470998,52.7804403003678,79.3031203989749,94.5924055829494,60.1686595533155,50.1436368481873,55.7006780248159,51.6867902028545,18.1387417422872,64.0580387001799,57.74272866402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| ||
|short_description=p1@Rfc1 | |short_description=p1@Rfc1 | ||
}} | }} |
Latest revision as of 03:22, 26 September 2015
Short description: | p1@Rfc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rfc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:364 |
Association with transcript: | 0bp_to_ENSMUST00000031092, ENSMUST00000163403, ENSMUST00000172660, ENSMUST00000172732, ENSMUST00000173451, ENSMUST00000173994, NM_011258, uc008xni.2, uc008xnj.2, uc008xnk.2, uc008xnl.2_5end |
EntrezGene: | Rfc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 1.47e-10 | 134 |
mesoderm | 5.46e-09 | 120 |
mesoderm-derived structure | 5.46e-09 | 120 |
presumptive mesoderm | 5.46e-09 | 120 |
gonad | 3.94e-07 | 18 |
gonad primordium | 3.94e-07 | 18 |
body cavity | 6.46e-07 | 37 |
body cavity or lining | 6.46e-07 | 37 |
anatomical cavity | 6.91e-07 | 39 |
body cavity precursor | 9.64e-07 | 38 |