FFCP PHASE1:Mm9::chr5:65522348..65522397,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=71778|HGNC=|MCL_coexpression_id=13|UniProt=E9QA66|association_with_transcript=-30bp_to_ENSMUST00000031089_5end|description=CAGE_peak_3_at_Klhl5_5end|id=chr5:65522348..65522397,+|ontology_enrichment_celltype=CL:0000117!1.13e-18!23;CL:0000337!1.13e-18!23;CL:0000540!1.55e-15!33;CL:0000047!1.55e-15!33;CL:0000031!1.55e-15!33;CL:0000404!1.55e-15!33;CL:0000221!9.14e-13!44;CL:0000133!9.14e-13!44;CL:0002319!3.11e-12!43;CL:0000393!2.37e-11!39;CL:0000211!2.37e-11!39;CL:0000055!7.22e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-25,23;CL:0000337,1.83e-25,23;CL:0000540,2.77e-15,33;CL:0000047,2.77e-15,33;CL:0000031,2.77e-15,33;CL:0000404,2.77e-15,33;CL:0000393,9.35e-12,39;CL:0000211,9.35e-12,39;CL:0000221,1.33e-10,44;CL:0000133,1.33e-10,44;CL:0002319,5.57e-10,43;CL:0002609,1.22e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.27e-33!73;UBERON:0005743!8.27e-33!73;UBERON:0000073!3.45e-32!75;UBERON:0001016!3.45e-32!75;UBERON:0000033!1.73e-30!63;UBERON:0001049!3.13e-29!52;UBERON:0005068!3.13e-29!52;UBERON:0006241!3.13e-29!52;UBERON:0007135!3.13e-29!52;UBERON:0004121!1.71e-28!102;UBERON:0000924!1.71e-28!102;UBERON:0006601!1.71e-28!102;UBERON:0002346!5.58e-28!71;UBERON:0003075!5.58e-28!71;UBERON:0007284!5.58e-28!71;UBERON:0000955!3.58e-27!50;UBERON:0006238!3.58e-27!50;UBERON:0002616!2.83e-26!49;UBERON:0003056!3.08e-26!49;UBERON:0002020!1.56e-22!34;UBERON:0003080!1.92e-22!40;UBERON:0002780!1.10e-21!39;UBERON:0001890!1.10e-21!39;UBERON:0006240!1.10e-21!39;UBERON:0002791!4.22e-18!29;UBERON:0003528!4.22e-18!29;UBERON:0001893!4.22e-18!29;UBERON:0007811!3.02e-16!86;UBERON:0000153!6.51e-15!94;UBERON:0000956!4.09e-12!21;UBERON:0001869!4.09e-12!21;UBERON:0000203!4.09e-12!21;UBERON:0002619!2.67e-09!17;UBERON:0002021!1.45e-07!10;UBERON:0000411!1.45e-07!10;UBERON:0001950!1.45e-07!10;UBERON:0002420!2.61e-07!8;UBERON:0007245!2.61e-07!8;UBERON:0010009!2.61e-07!8;UBERON:0010011!2.61e-07!8;UBERON:0000454!2.61e-07!8;UBERON:0003076!3.34e-07!12;UBERON:0003057!3.34e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.76e-34,54;UBERON:0001049,5.02e-32,52;UBERON:0005068,5.02e-32,52;UBERON:0006241,5.02e-32,52;UBERON:0007135,5.02e-32,52;UBERON:0002020,1.76e-31,34;UBERON:0002346,1.23e-30,64;UBERON:0003075,1.23e-30,64;UBERON:0007284,1.23e-30,64;UBERON:0001017,8.85e-29,73;UBERON:0001016,1.38e-27,75;UBERON:0010371,2.44e-26,73;UBERON:0000955,4.68e-26,47;UBERON:0006238,4.68e-26,47;UBERON:0003528,3.02e-25,29;UBERON:0002791,3.02e-25,29;UBERON:0001893,3.02e-25,29;UBERON:0004121,3.33e-25,95;UBERON:0000924,3.33e-25,95;UBERON:0006601,3.33e-25,95;UBERON:0002616,6.41e-25,46;UBERON:0003056,3.19e-23,49;UBERON:0003080,2.14e-22,40;UBERON:0002780,2.05e-21,39;UBERON:0001890,2.05e-21,39;UBERON:0006240,2.05e-21,39;UBERON:0010314,9.20e-18,92;UBERON:0000956,7.77e-17,21;UBERON:0001869,7.77e-17,21;UBERON:0000203,7.77e-17,21;UBERON:0002619,6.98e-13,17;UBERON:0003076,5.70e-10,12;UBERON:0003057,5.70e-10,12;UBERON:0002021,6.04e-10,10;UBERON:0000411,6.04e-10,10;UBERON:0001950,6.04e-10,10;UBERON:0002420,1.36e-09,8;UBERON:0007245,1.36e-09,8;UBERON:0010009,1.36e-09,8;UBERON:0010011,1.36e-09,8;UBERON:0000454,1.36e-09,8;UBERON:0002240,1.65e-08,6;UBERON:0005174,1.65e-08,6;UBERON:0001137,1.65e-08,6;UBERON:0000025,1.48e-07,114;UBERON:0001948,2.06e-07,5;UBERON:0002315,2.06e-07,5;UBERON:0004111,7.14e-07,122;UBERON:0000369,9.96e-07,5;UBERON:0002435,9.96e-07,5;UBERON:0000204,9.96e-07,5;UBERON:0010082,9.96e-07,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,6.32506635081714,6.21027316325777,5.46844899513593,7.14127461009509,10.6016899656774,4.5321595709533,3.73797336971122,6.43453150627015,3.30347642998166,6.2566795661742,9.83081812839958,5.27545150920775,6.58711033937349,8.85552729946492,2.79182999001381,6.19038871034848,5.80633341551878,8.2496003932627,10.9626194215309,4.65998614563251,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,3.80615036115011,4.81727425670947,0,0,0,0,5.24267237916879,5.03250663100489,3.8952849154988,2.43354048269187,6.39288643325826,6.2336413367868,10.3834408363365,0.101839363850316,0,0,0.841767423545896,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,2.51735046859913,2.562274405697,2.15513966487376,3.62184719034622,0,0.189106080167819,0.879755620819744,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,6.09840850835969,11.5253165864799,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,5.77982123956051,10.6662634798905,0,0,0,0,0.861693590931196,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0.395287777946524,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.646793418913773,0.214337035031592,0.709360934569094,0.713475270408282,1.64549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,6.90487854760765,7.44764167471216,5.84300819968538,2.05524755931193,5.2877572817279,1.35004500046361,3.15224842256954,2.26571204492102,1.03552062350364,1.55681021376265,1.99512436700516,2.04880326904961,1.94485373654635,1.25767897576789,1.10306105070008,1.11123363900808,1.23621034343337,1.28367683836726,1.76888048234658,0.50695859978048,1.32038438970253,1.68554713445788,1.34452820050225,1.09127391015665,2.85776214769844,1.27472758539341,3.27945674788299,1.23625770240992,1.76638704161277,1.02860775715625,0.887379030796687,2.14592570952589,0.872078499793971,1.31753132581463,1.4384483341585,1.64635175585495,1.05227884575137,1.22223702461276,0,0.355905054372522,0.985044823755635,0.409231043169689,1.08455788830176,0.385813221962283,0.999242311751784,1.40358965067245,1.07435527024149,0.765153328275374,1.10295709559758,0.463735671240843|short_description=p3@Klhl5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71778 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=E9QA66 | |||
|association_with_transcript=-30bp_to_ENSMUST00000031089_5end | |||
|cluster_id=chr5:65522348..65522397,+ | |||
|description=CAGE_peak_3_at_Klhl5_5end | |||
|id=chr5:65522348..65522397,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.13e-18!23;CL:0000337!1.13e-18!23;CL:0000540!1.55e-15!33;CL:0000047!1.55e-15!33;CL:0000031!1.55e-15!33;CL:0000404!1.55e-15!33;CL:0000221!9.14e-13!44;CL:0000133!9.14e-13!44;CL:0002319!3.11e-12!43;CL:0000393!2.37e-11!39;CL:0000211!2.37e-11!39;CL:0000055!7.22e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-25,23;CL:0000337,1.83e-25,23;CL:0000540,2.77e-15,33;CL:0000047,2.77e-15,33;CL:0000031,2.77e-15,33;CL:0000404,2.77e-15,33;CL:0000393,9.35e-12,39;CL:0000211,9.35e-12,39;CL:0000221,1.33e-10,44;CL:0000133,1.33e-10,44;CL:0002319,5.57e-10,43;CL:0002609,1.22e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.27e-33!73;UBERON:0005743!8.27e-33!73;UBERON:0000073!3.45e-32!75;UBERON:0001016!3.45e-32!75;UBERON:0000033!1.73e-30!63;UBERON:0001049!3.13e-29!52;UBERON:0005068!3.13e-29!52;UBERON:0006241!3.13e-29!52;UBERON:0007135!3.13e-29!52;UBERON:0004121!1.71e-28!102;UBERON:0000924!1.71e-28!102;UBERON:0006601!1.71e-28!102;UBERON:0002346!5.58e-28!71;UBERON:0003075!5.58e-28!71;UBERON:0007284!5.58e-28!71;UBERON:0000955!3.58e-27!50;UBERON:0006238!3.58e-27!50;UBERON:0002616!2.83e-26!49;UBERON:0003056!3.08e-26!49;UBERON:0002020!1.56e-22!34;UBERON:0003080!1.92e-22!40;UBERON:0002780!1.10e-21!39;UBERON:0001890!1.10e-21!39;UBERON:0006240!1.10e-21!39;UBERON:0002791!4.22e-18!29;UBERON:0003528!4.22e-18!29;UBERON:0001893!4.22e-18!29;UBERON:0007811!3.02e-16!86;UBERON:0000153!6.51e-15!94;UBERON:0000956!4.09e-12!21;UBERON:0001869!4.09e-12!21;UBERON:0000203!4.09e-12!21;UBERON:0002619!2.67e-09!17;UBERON:0002021!1.45e-07!10;UBERON:0000411!1.45e-07!10;UBERON:0001950!1.45e-07!10;UBERON:0002420!2.61e-07!8;UBERON:0007245!2.61e-07!8;UBERON:0010009!2.61e-07!8;UBERON:0010011!2.61e-07!8;UBERON:0000454!2.61e-07!8;UBERON:0003076!3.34e-07!12;UBERON:0003057!3.34e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.76e-34,54;UBERON:0001049,5.02e-32,52;UBERON:0005068,5.02e-32,52;UBERON:0006241,5.02e-32,52;UBERON:0007135,5.02e-32,52;UBERON:0002020,1.76e-31,34;UBERON:0002346,1.23e-30,64;UBERON:0003075,1.23e-30,64;UBERON:0007284,1.23e-30,64;UBERON:0001017,8.85e-29,73;UBERON:0001016,1.38e-27,75;UBERON:0010371,2.44e-26,73;UBERON:0000955,4.68e-26,47;UBERON:0006238,4.68e-26,47;UBERON:0003528,3.02e-25,29;UBERON:0002791,3.02e-25,29;UBERON:0001893,3.02e-25,29;UBERON:0004121,3.33e-25,95;UBERON:0000924,3.33e-25,95;UBERON:0006601,3.33e-25,95;UBERON:0002616,6.41e-25,46;UBERON:0003056,3.19e-23,49;UBERON:0003080,2.14e-22,40;UBERON:0002780,2.05e-21,39;UBERON:0001890,2.05e-21,39;UBERON:0006240,2.05e-21,39;UBERON:0010314,9.20e-18,92;UBERON:0000956,7.77e-17,21;UBERON:0001869,7.77e-17,21;UBERON:0000203,7.77e-17,21;UBERON:0002619,6.98e-13,17;UBERON:0003076,5.70e-10,12;UBERON:0003057,5.70e-10,12;UBERON:0002021,6.04e-10,10;UBERON:0000411,6.04e-10,10;UBERON:0001950,6.04e-10,10;UBERON:0002420,1.36e-09,8;UBERON:0007245,1.36e-09,8;UBERON:0010009,1.36e-09,8;UBERON:0010011,1.36e-09,8;UBERON:0000454,1.36e-09,8;UBERON:0002240,1.65e-08,6;UBERON:0005174,1.65e-08,6;UBERON:0001137,1.65e-08,6;UBERON:0000025,1.48e-07,114;UBERON:0001948,2.06e-07,5;UBERON:0002315,2.06e-07,5;UBERON:0004111,7.14e-07,122;UBERON:0000369,9.96e-07,5;UBERON:0002435,9.96e-07,5;UBERON:0000204,9.96e-07,5;UBERON:0010082,9.96e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,6.32506635081714,6.21027316325777,5.46844899513593,7.14127461009509,10.6016899656774,4.5321595709533,3.73797336971122,6.43453150627015,3.30347642998166,6.2566795661742,9.83081812839958,5.27545150920775,6.58711033937349,8.85552729946492,2.79182999001381,6.19038871034848,5.80633341551878,8.2496003932627,10.9626194215309,4.65998614563251,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,3.80615036115011,4.81727425670947,0,0,0,0,5.24267237916879,5.03250663100489,3.8952849154988,2.43354048269187,6.39288643325826,6.2336413367868,10.3834408363365,0.101839363850316,0,0,0.841767423545896,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,2.51735046859913,2.562274405697,2.15513966487376,3.62184719034622,0,0.189106080167819,0.879755620819744,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,6.09840850835969,11.5253165864799,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,5.77982123956051,10.6662634798905,0,0,0,0,0.861693590931196,0.238968797952552,0.445597348164788,0,0.404810701674894,0,0.395287777946524,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.646793418913773,0.214337035031592,0.709360934569094,0.713475270408282,1.64549020602121,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,6.90487854760765,7.44764167471216,5.84300819968538,2.05524755931193,5.2877572817279,1.35004500046361,3.15224842256954,2.26571204492102,1.03552062350364,1.55681021376265,1.99512436700516,2.04880326904961,1.94485373654635,1.25767897576789,1.10306105070008,1.11123363900808,1.23621034343337,1.28367683836726,1.76888048234658,0.50695859978048,1.32038438970253,1.68554713445788,1.34452820050225,1.09127391015665,2.85776214769844,1.27472758539341,3.27945674788299,1.23625770240992,1.76638704161277,1.02860775715625,0.887379030796687,2.14592570952589,0.872078499793971,1.31753132581463,1.4384483341585,1.64635175585495,1.05227884575137,1.22223702461276,0,0.355905054372522,0.985044823755635,0.409231043169689,1.08455788830176,0.385813221962283,0.999242311751784,1.40358965067245,1.07435527024149,0.765153328275374,1.10295709559758,0.463735671240843 | |||
|short_description=p3@Klhl5 | |||
}} |
Latest revision as of 03:20, 26 September 2015
Short description: | p3@Klhl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Klhl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -30bp_to_ENSMUST00000031089_5end |
EntrezGene: | Klhl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.83e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-25 | 23 |
neuron | 2.77e-15 | 33 |
neuronal stem cell | 2.77e-15 | 33 |
neuroblast | 2.77e-15 | 33 |
electrically signaling cell | 2.77e-15 | 33 |
electrically responsive cell | 9.35e-12 | 39 |
electrically active cell | 9.35e-12 | 39 |
ectodermal cell | 1.33e-10 | 44 |
neurectodermal cell | 1.33e-10 | 44 |
neural cell | 5.57e-10 | 43 |
neuron of cerebral cortex | 1.22e-07 | 6 |