FFCP PHASE1:Mm9::chr4:10801685..10801754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67157 | |EntrezGene=67157 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=463 | |MCL_coexpression_id=463 | ||
|TSSclassifier=NA | |||
|UniProt=Q9D005,B1AV75 | |UniProt=Q9D005,B1AV75 | ||
|association_with_transcript=0bp_to_ENSMUST00000072099,ENSMUST00000101504,ENSMUST00000156124_5end | |association_with_transcript=0bp_to_ENSMUST00000072099,ENSMUST00000101504,ENSMUST00000156124_5end | ||
|cluster_id=chr4:10801685..10801754,+ | |||
|description=CAGE_peak_1_at_2610301B20Rik_5end | |description=CAGE_peak_1_at_2610301B20Rik_5end | ||
|id=chr4:10801685..10801754,+ | |id=chr4:10801685..10801754,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.55e-13!50;CL:0000393!9.35e-13!39;CL:0000211!9.35e-13!39;CL:0000221!1.55e-12!44;CL:0000133!1.55e-12!44;CL:0002319!5.23e-12!43;CL:0000540!4.47e-11!33;CL:0000047!4.47e-11!33;CL:0000031!4.47e-11!33;CL:0000404!4.47e-11!33;CL:0000117!5.92e-09!23;CL:0000337!5.92e-09!23 | |ontology_enrichment_celltype=CL:0000055!2.55e-13!50;CL:0000393!9.35e-13!39;CL:0000211!9.35e-13!39;CL:0000221!1.55e-12!44;CL:0000133!1.55e-12!44;CL:0002319!5.23e-12!43;CL:0000540!4.47e-11!33;CL:0000047!4.47e-11!33;CL:0000031!4.47e-11!33;CL:0000404!4.47e-11!33;CL:0000117!5.92e-09!23;CL:0000337!5.92e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.31e-13,39;CL:0000211,9.31e-13,39;CL:0000221,1.66e-12,44;CL:0000133,1.66e-12,44;CL:0002319,5.58e-12,43;CL:0000540,4.45e-11,33;CL:0000047,4.45e-11,33;CL:0000031,4.45e-11,33;CL:0000404,4.45e-11,33;CL:0000117,5.90e-09,23;CL:0000337,5.90e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.01e-27!75;UBERON:0001016!9.01e-27!75;UBERON:0001017!1.55e-25!73;UBERON:0005743!1.55e-25!73;UBERON:0004121!1.35e-23!102;UBERON:0000924!1.35e-23!102;UBERON:0006601!1.35e-23!102;UBERON:0002346!9.73e-22!71;UBERON:0003075!9.73e-22!71;UBERON:0007284!9.73e-22!71;UBERON:0000033!4.32e-20!63;UBERON:0001049!4.04e-19!52;UBERON:0005068!4.04e-19!52;UBERON:0006241!4.04e-19!52;UBERON:0007135!4.04e-19!52;UBERON:0000955!8.18e-19!50;UBERON:0006238!8.18e-19!50;UBERON:0002616!3.70e-18!49;UBERON:0003056!1.44e-17!49;UBERON:0003080!3.20e-16!40;UBERON:0002780!1.33e-15!39;UBERON:0001890!1.33e-15!39;UBERON:0006240!1.33e-15!39;UBERON:0002020!2.18e-14!34;UBERON:0002791!1.82e-12!29;UBERON:0003528!1.82e-12!29;UBERON:0001893!1.82e-12!29;UBERON:0007811!5.14e-11!86;UBERON:0000153!2.35e-09!94;UBERON:0000025!4.12e-09!114;UBERON:0000956!5.33e-09!21;UBERON:0001869!5.33e-09!21;UBERON:0000203!5.33e-09!21;UBERON:0004111!5.70e-09!122;UBERON:0002619!1.20e-07!17;UBERON:0000475!4.60e-07!200 | |ontology_enrichment_uberon=UBERON:0000073!9.01e-27!75;UBERON:0001016!9.01e-27!75;UBERON:0001017!1.55e-25!73;UBERON:0005743!1.55e-25!73;UBERON:0004121!1.35e-23!102;UBERON:0000924!1.35e-23!102;UBERON:0006601!1.35e-23!102;UBERON:0002346!9.73e-22!71;UBERON:0003075!9.73e-22!71;UBERON:0007284!9.73e-22!71;UBERON:0000033!4.32e-20!63;UBERON:0001049!4.04e-19!52;UBERON:0005068!4.04e-19!52;UBERON:0006241!4.04e-19!52;UBERON:0007135!4.04e-19!52;UBERON:0000955!8.18e-19!50;UBERON:0006238!8.18e-19!50;UBERON:0002616!3.70e-18!49;UBERON:0003056!1.44e-17!49;UBERON:0003080!3.20e-16!40;UBERON:0002780!1.33e-15!39;UBERON:0001890!1.33e-15!39;UBERON:0006240!1.33e-15!39;UBERON:0002020!2.18e-14!34;UBERON:0002791!1.82e-12!29;UBERON:0003528!1.82e-12!29;UBERON:0001893!1.82e-12!29;UBERON:0007811!5.14e-11!86;UBERON:0000153!2.35e-09!94;UBERON:0000025!4.12e-09!114;UBERON:0000956!5.33e-09!21;UBERON:0001869!5.33e-09!21;UBERON:0000203!5.33e-09!21;UBERON:0004111!5.70e-09!122;UBERON:0002619!1.20e-07!17;UBERON:0000475!4.60e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.71e-27,75;UBERON:0001017,1.67e-25,73;UBERON:0004121,5.54e-23,95;UBERON:0000924,5.54e-23,95;UBERON:0006601,5.54e-23,95;UBERON:0002346,1.26e-21,64;UBERON:0003075,1.26e-21,64;UBERON:0007284,1.26e-21,64;UBERON:0000073,3.12e-20,54;UBERON:0001049,4.36e-19,52;UBERON:0005068,4.36e-19,52;UBERON:0006241,4.36e-19,52;UBERON:0007135,4.36e-19,52;UBERON:0010371,1.08e-18,73;UBERON:0003056,1.43e-17,49;UBERON:0000955,4.42e-17,47;UBERON:0006238,4.42e-17,47;UBERON:0002616,1.93e-16,46;UBERON:0003080,3.18e-16,40;UBERON:0010314,6.81e-16,92;UBERON:0002780,1.33e-15,39;UBERON:0001890,1.33e-15,39;UBERON:0006240,1.33e-15,39;UBERON:0002020,2.17e-14,34;UBERON:0003528,1.81e-12,29;UBERON:0002791,1.81e-12,29;UBERON:0001893,1.81e-12,29;UBERON:0000025,4.28e-09,114;UBERON:0000956,5.32e-09,21;UBERON:0001869,5.32e-09,21;UBERON:0000203,5.32e-09,21;UBERON:0004111,5.91e-09,122;UBERON:0002619,1.20e-07,17 | |||
|phase1_expression=12.8119077683835,1.39590163055744,2.27499619694768,0.90739263392049,0.500895729946347,1.34303417529512,1.86890112476421,1.54947988129892,0.281577444303333,0.70219357896598,0.34243593645101,1.03703806693937,2.22560948910567,1.48614684112296,3.99731714178795,4.25198061518635,0.699561878128147,1.10411757875383,2.19383093769182,2.12194825899015,15.6479653877968,9.23405846168233,8.8807928307238,2.07990149631429,1.37645568640302,0.57423196411502,1.7230479846363,1.939241094173,0.570070258369122,1.76421090831952,1.55211357458713,3.17515336729816,4.30545351309199,0,2.59966457776147,2.49351968037739,2.45003227514843,0,0,0,0,0,0.485510353031154,8.81277725829041,8.21153142878068,8.81024410376071,0.782391344348039,4.57852828398938,7.24964403023757,13.026803237977,7.55926676776958,5.75010257459886,1.51004345451963,1.45072428402269,0.672187598284928,4.88792928468299,7.16333599846892,6.70373719960675,7.89034197352431,8.46385566835253,6.33831403506179,2.03306719241479,0.889294796111139,2.2497492932035,0,1.4209602298922,2.99600110518405,6.91592949578798,8.70992743391212,6.48028503992115,6.73039876324422,5.71301968807607,7.28866185140325,7.22695715368229,5.75072826109418,2.75765635983006,8.8092704799511,13.4071704989447,13.8245879930619,8.83638127792299,12.6252948171325,8.33461392890816,11.1673199600552,18.0084035210138,19.2525792198781,9.72274332063103,10.1083893367363,11.7431650869939,13.8578933799727,9.06858721281426,4.34796733052517,3.44169550792555,2.03991400112325,1.07940638327563,3.24888208723835,1.34408066129201,4.91555470461132,5.62420064507591,5.45550609666024,5.65343319216544,11.6900038414645,16.6824420638613,20.3844191765317,28.4426681261332,1.94841936910093,3.04031838570118,2.52762222507392,4.79572294820052,3.88406825470758,7.57054909230606,2.77576522825817,3.65358573974569,4.38169444786511,5.72746034099966,7.2904998424137,7.03732911446183,1.48316980640624,2.16899035379867,2.65383165584962,5.01477234836968,3.5334642953663,4.84875253135222,3.72783522436244,6.44117753425404,7.54008144528438,0.766371165625774,6.11057134980193,6.59893004092748,6.86179226194549,13.7807388252437,5.94750783664214,6.65968066198181,13.9059456153821,8.95004100656157,10.389402227978,11.1946471516753,3.86989582631202,4.10543003013307,5.55990068554084,3.15662783829711,4.94457683258274,8.73627996847197,10.6236656585156,8.28876498096433,11.1579858608178,8.19927809823039,8.62055865949505,3.10444044886819,2.15567992932842,3.21480336285293,3.87092473160687,4.16471891612392,2.78047249225598,4.52727816478817,2.67516777330327,5.37392520409932,3.51106593656617,3.3455227924913,6.25159698670304,3.72826390563903,3.28336483973535,3.96136535214233,4.26140524053378,2.75469924446365,3.5481435964097,2.79040733700489,2.41446061259657,3.61972561338225,1.81015834904829,2.62667942526552,2.59420190546738,3.21639972335731,1.09775057645525,3.48936688776967,10.7247873767705,9.46722433889417,0,1.58670339998127,4.47905326123991,3.71578674976702,4.38149368495117,4.43703754171354,3.55804870151792,1.71203063501303,2.37264530772256,1.64698954724011,2.5133520880027,2.78539060857611,2.33956904542944,1.79763881730844,1.29682829924817,1.39398891278057,2.65535061334314,5.1411830674378,6.76246414038483,3.46207257337034,3.68509725618489,4.27828501330943,5.05892296994058,3.39503340353085,3.92496819603437,4.56569506510662,3.85388415213294,4.00428253718626,4.91397487783007,4.04751802292737,3.85434230638156,3.61765739628625,2.80088436959562,4.60313819921297,3.40483976227574,2.47105271869273,2.87536413054709,1.48856379067401,4.05648975048929,1.26289438973556,2.51156378930677,3.85954817090694,5.72734889516475,5.87423376488503,3.09633455239849,3.73439188705414,4.69380496577004,6.19773152534718,5.2369600994923,7.02481132288076,5.2019597555043,5.53661724121937,4.9430978283821,5.73521601505083,7.08008425650172,6.07526046042349,4.52373851817817,5.4390568381871,0.983528546038072,1.37968373152366,10.5963389391943,10.1974167335217,5.40985319743029,2.01976741763498,7.57219726599016,7.02789739733949,6.46270193198397,4.30143836314594,6.46116154838943,6.51076020814315,4.85772842009873,6.72188473196017,9.48690667071656,14.1381379225595,6.81312408999689,2.31485284767432,4.23506094319298,8.24850614862677,1.32745138339963,5.58395463156457,6.95344181018927,4.71512699389745,2.65771703592696,6.7635732547664,4.65170927702798,4.36240475373007,5.34746067577082,5.68866164284469,1.05418608574999,3.09406629744561,16.3411010761818,6.66226047915848,3.23396709456886,8.57348140126369,11.8817956540323,11.2372355089304,9.21474515371877,4.87143918583359,3.98941903708308,3.60114520468494,2.8668691747145,2.96795255294664,3.55221738730992,3.25689794612042,3.58117032009409,4.10352249362653,2.62332752966866,11.3109434226411,2.56306321196779,3.50857675537478,3.51869602002452,6.02779062415011,3.8274383761887,3.43167259809784,3.22959016988325,2.93898049879682,4.28419918793714,1.90934123603023,4.9032079005076,4.87966721104437,4.10420295122845,3.55450103224597,3.49380101993884,3.64133735239016,3.140831317562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| ||
|short_description=p1@2610301B20Rik | |short_description=p1@2610301B20Rik | ||
}} | }} |
Latest revision as of 03:19, 26 September 2015
Short description: | p1@2610301B20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2610301B20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_ENSMUST00000072099, ENSMUST00000101504, ENSMUST00000156124_5end |
EntrezGene: | 2610301B20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.31e-13 | 39 |
electrically active cell | 9.31e-13 | 39 |
ectodermal cell | 1.66e-12 | 44 |
neurectodermal cell | 1.66e-12 | 44 |
neural cell | 5.58e-12 | 43 |
neuron | 4.45e-11 | 33 |
neuronal stem cell | 4.45e-11 | 33 |
neuroblast | 4.45e-11 | 33 |
electrically signaling cell | 4.45e-11 | 33 |
CNS neuron (sensu Vertebrata) | 5.90e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.90e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.71e-27 | 75 |
central nervous system | 1.67e-25 | 73 |
ectoderm-derived structure | 5.54e-23 | 95 |
ectoderm | 5.54e-23 | 95 |
presumptive ectoderm | 5.54e-23 | 95 |
neurectoderm | 1.26e-21 | 64 |
neural plate | 1.26e-21 | 64 |
presumptive neural plate | 1.26e-21 | 64 |
regional part of nervous system | 3.12e-20 | 54 |
neural tube | 4.36e-19 | 52 |
neural rod | 4.36e-19 | 52 |
future spinal cord | 4.36e-19 | 52 |
neural keel | 4.36e-19 | 52 |
ecto-epithelium | 1.08e-18 | 73 |
pre-chordal neural plate | 1.43e-17 | 49 |
brain | 4.42e-17 | 47 |
future brain | 4.42e-17 | 47 |
regional part of brain | 1.93e-16 | 46 |
anterior neural tube | 3.18e-16 | 40 |
structure with developmental contribution from neural crest | 6.81e-16 | 92 |
regional part of forebrain | 1.33e-15 | 39 |
forebrain | 1.33e-15 | 39 |
future forebrain | 1.33e-15 | 39 |
gray matter | 2.17e-14 | 34 |
brain grey matter | 1.81e-12 | 29 |
regional part of telencephalon | 1.81e-12 | 29 |
telencephalon | 1.81e-12 | 29 |
tube | 4.28e-09 | 114 |
cerebral cortex | 5.32e-09 | 21 |
cerebral hemisphere | 5.32e-09 | 21 |
pallium | 5.32e-09 | 21 |
anatomical conduit | 5.91e-09 | 122 |
regional part of cerebral cortex | 1.20e-07 | 17 |