FFCP PHASE1:Mm9::chr11:98603119..98603130,+: Difference between revisions
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{{FFCP|EntrezGene=21833|HGNC=|MCL_coexpression_id=1|UniProt=P63058|association_with_transcript=0bp_to_ENSMUST00000064187,ENSMUST00000152195_5end|description=CAGE_peak_2_at_Thra_5end|id=chr11:98603119..98603130,+|ontology_enrichment_celltype=CL:0000117!3.79e-13!23;CL:0000337!3.79e-13!23;CL:0000221!1.21e-11!44;CL:0000133!1.21e-11!44;CL:0002319!1.48e-11!43;CL:0000540!2.22e-10!33;CL:0000047!2.22e-10!33;CL:0000031!2.22e-10!33;CL:0000404!2.22e-10!33;CL:0000055!2.26e-08!50;CL:0000393!9.57e-08!39;CL:0000211!9.57e-08!39;CL:0002321!1.74e-07!70;CL:0000220!1.74e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,3.78e-13,23;CL:0000337,3.78e-13,23;CL:0000221,1.21e-11,44;CL:0000133,1.21e-11,44;CL:0002319,1.47e-11,43;CL:0000540,2.21e-10,33;CL:0000047,2.21e-10,33;CL:0000031,2.21e-10,33;CL:0000404,2.21e-10,33;CL:0000393,9.55e-08,39;CL:0000211,9.55e-08,39;CL:0002321,1.67e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.36e-28!73;UBERON:0005743!7.36e-28!73;UBERON:0000073!8.64e-26!75;UBERON:0001016!8.64e-26!75;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!1.55e-23!50;UBERON:0006238!1.55e-23!50;UBERON:0002616!5.31e-23!49;UBERON:0000033!4.48e-22!63;UBERON:0004121!5.50e-21!102;UBERON:0000924!5.50e-21!102;UBERON:0006601!5.50e-21!102;UBERON:0002346!7.84e-21!71;UBERON:0003075!7.84e-21!71;UBERON:0007284!7.84e-21!71;UBERON:0002020!9.66e-21!34;UBERON:0003080!2.44e-18!40;UBERON:0002791!4.29e-18!29;UBERON:0003528!4.29e-18!29;UBERON:0001893!4.29e-18!29;UBERON:0002780!9.47e-18!39;UBERON:0001890!9.47e-18!39;UBERON:0006240!9.47e-18!39;UBERON:0003056!2.02e-17!49;UBERON:0000956!2.56e-13!21;UBERON:0001869!2.56e-13!21;UBERON:0000203!2.56e-13!21;UBERON:0002619!3.59e-11!17;UBERON:0007811!2.50e-09!86;UBERON:0002021!3.89e-08!10;UBERON:0000411!3.89e-08!10;UBERON:0001950!3.89e-08!10;UBERON:0000025!1.10e-07!114;UBERON:0000153!1.63e-07!94;UBERON:0004111!5.85e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.32e-28,73;UBERON:0000073,7.11e-26,54;UBERON:0001016,8.60e-26,75;UBERON:0001049,2.09e-24,52;UBERON:0005068,2.09e-24,52;UBERON:0006241,2.09e-24,52;UBERON:0007135,2.09e-24,52;UBERON:0002346,9.28e-23,64;UBERON:0003075,9.28e-23,64;UBERON:0007284,9.28e-23,64;UBERON:0004121,3.63e-22,95;UBERON:0000924,3.63e-22,95;UBERON:0006601,3.63e-22,95;UBERON:0000955,1.22e-21,47;UBERON:0006238,1.22e-21,47;UBERON:0002616,4.08e-21,46;UBERON:0002020,9.62e-21,34;UBERON:0010371,3.03e-20,73;UBERON:0003080,2.43e-18,40;UBERON:0010314,3.00e-18,92;UBERON:0003528,4.28e-18,29;UBERON:0002791,4.28e-18,29;UBERON:0001893,4.28e-18,29;UBERON:0002780,9.44e-18,39;UBERON:0001890,9.44e-18,39;UBERON:0006240,9.44e-18,39;UBERON:0003056,2.02e-17,49;UBERON:0000956,2.55e-13,21;UBERON:0001869,2.55e-13,21;UBERON:0000203,2.55e-13,21;UBERON:0002619,3.58e-11,17;UBERON:0002021,3.88e-08,10;UBERON:0000411,3.88e-08,10;UBERON:0001950,3.88e-08,10;UBERON:0000025,1.12e-07,114;UBERON:0004111,5.96e-07,122|phase1_expression=12.4916100741739,16.0528687514106,20.4749657725291,29.9439569193762,21.5385163876929,7.21880869221126,5.84031601488814,1.16210991097419,0,0,0.171217968225505,0,3.42401459862411,1.74840804837995,2.33176833270964,2.42970320867791,1.39912375625629,1.26184866143295,0.274228867211478,0.84877930359606,12.5864069423583,1.98581902401771,1.82839852397255,3.51983330145495,5.27641346454491,15.5042630311055,6.46142994238612,7.32602191132023,13.8717096203153,11.8454160987167,3.10422714917427,1.27006134691926,4.92051830067656,0,7.79899373328441,6.31691652362271,4.28755648150975,5.02237956884289,2.3440060335714,4.71171369576418,4.1176204162171,6.14740936462601,9.22469670759192,4.28049181116963,4.46058497365864,5.32285581268876,22.6893489860931,12.209408757305,18.2339531669612,13.026803237977,12.4587915246573,11.5002051491977,0.838913030288682,1.45072428402269,2.01656279485478,2.57259436035947,6.87680255853016,4.64104883049698,35.0007477287104,27.5075309221457,31.0577387718028,6.09920157724438,6.22506357277798,4.49949858640699,5.93319817540185,4.2628806896766,16.4780060785123,38.4218305321555,33.6991240002552,36.0465855345614,34.0726437389239,48.8463183330504,34.2346238475001,28.7853378155142,24.9198224647415,24.8189072384706,39.6417171597799,39.0723254540674,38.0944202475484,39.8296588945185,36.412082153759,50.5285969440057,44.1109138422182,34.8912818219642,41.866719890846,23.5702868378934,33.172601626191,32.9927019110782,1.51452386666368,2.72057616384428,10.4351215932604,0.860423876981386,0,4.85732872474035,1.29955283489534,1.34408066129201,6.60088774619234,5.79463096765396,7.79358013808606,8.48014978824817,9.29566570526091,20.5322363862909,35.6727335589304,42.6640021891999,1.29894624606728,1.52015919285059,3.0331466700887,2.8545969929765,0.776813650941515,7.86743337043571,4.3371331691534,6.08930956624282,4.15107895060905,6.0289056221049,8.46638691377075,9.17366116706631,5.93267922562497,4.77177877835708,0,9.54424414689714,4.85851340612866,1.93950101254089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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21833 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P63058 | |||
|association_with_transcript=0bp_to_ENSMUST00000064187,ENSMUST00000152195_5end | |||
|cluster_id=chr11:98603119..98603130,+ | |||
|description=CAGE_peak_2_at_Thra_5end | |||
|id=chr11:98603119..98603130,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.79e-13!23;CL:0000337!3.79e-13!23;CL:0000221!1.21e-11!44;CL:0000133!1.21e-11!44;CL:0002319!1.48e-11!43;CL:0000540!2.22e-10!33;CL:0000047!2.22e-10!33;CL:0000031!2.22e-10!33;CL:0000404!2.22e-10!33;CL:0000055!2.26e-08!50;CL:0000393!9.57e-08!39;CL:0000211!9.57e-08!39;CL:0002321!1.74e-07!70;CL:0000220!1.74e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.78e-13,23;CL:0000337,3.78e-13,23;CL:0000221,1.21e-11,44;CL:0000133,1.21e-11,44;CL:0002319,1.47e-11,43;CL:0000540,2.21e-10,33;CL:0000047,2.21e-10,33;CL:0000031,2.21e-10,33;CL:0000404,2.21e-10,33;CL:0000393,9.55e-08,39;CL:0000211,9.55e-08,39;CL:0002321,1.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.36e-28!73;UBERON:0005743!7.36e-28!73;UBERON:0000073!8.64e-26!75;UBERON:0001016!8.64e-26!75;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!1.55e-23!50;UBERON:0006238!1.55e-23!50;UBERON:0002616!5.31e-23!49;UBERON:0000033!4.48e-22!63;UBERON:0004121!5.50e-21!102;UBERON:0000924!5.50e-21!102;UBERON:0006601!5.50e-21!102;UBERON:0002346!7.84e-21!71;UBERON:0003075!7.84e-21!71;UBERON:0007284!7.84e-21!71;UBERON:0002020!9.66e-21!34;UBERON:0003080!2.44e-18!40;UBERON:0002791!4.29e-18!29;UBERON:0003528!4.29e-18!29;UBERON:0001893!4.29e-18!29;UBERON:0002780!9.47e-18!39;UBERON:0001890!9.47e-18!39;UBERON:0006240!9.47e-18!39;UBERON:0003056!2.02e-17!49;UBERON:0000956!2.56e-13!21;UBERON:0001869!2.56e-13!21;UBERON:0000203!2.56e-13!21;UBERON:0002619!3.59e-11!17;UBERON:0007811!2.50e-09!86;UBERON:0002021!3.89e-08!10;UBERON:0000411!3.89e-08!10;UBERON:0001950!3.89e-08!10;UBERON:0000025!1.10e-07!114;UBERON:0000153!1.63e-07!94;UBERON:0004111!5.85e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.32e-28,73;UBERON:0000073,7.11e-26,54;UBERON:0001016,8.60e-26,75;UBERON:0001049,2.09e-24,52;UBERON:0005068,2.09e-24,52;UBERON:0006241,2.09e-24,52;UBERON:0007135,2.09e-24,52;UBERON:0002346,9.28e-23,64;UBERON:0003075,9.28e-23,64;UBERON:0007284,9.28e-23,64;UBERON:0004121,3.63e-22,95;UBERON:0000924,3.63e-22,95;UBERON:0006601,3.63e-22,95;UBERON:0000955,1.22e-21,47;UBERON:0006238,1.22e-21,47;UBERON:0002616,4.08e-21,46;UBERON:0002020,9.62e-21,34;UBERON:0010371,3.03e-20,73;UBERON:0003080,2.43e-18,40;UBERON:0010314,3.00e-18,92;UBERON:0003528,4.28e-18,29;UBERON:0002791,4.28e-18,29;UBERON:0001893,4.28e-18,29;UBERON:0002780,9.44e-18,39;UBERON:0001890,9.44e-18,39;UBERON:0006240,9.44e-18,39;UBERON:0003056,2.02e-17,49;UBERON:0000956,2.55e-13,21;UBERON:0001869,2.55e-13,21;UBERON:0000203,2.55e-13,21;UBERON:0002619,3.58e-11,17;UBERON:0002021,3.88e-08,10;UBERON:0000411,3.88e-08,10;UBERON:0001950,3.88e-08,10;UBERON:0000025,1.12e-07,114;UBERON:0004111,5.96e-07,122 | |||
|phase1_expression=12.4916100741739,16.0528687514106,20.4749657725291,29.9439569193762,21.5385163876929,7.21880869221126,5.84031601488814,1.16210991097419,0,0,0.171217968225505,0,3.42401459862411,1.74840804837995,2.33176833270964,2.42970320867791,1.39912375625629,1.26184866143295,0.274228867211478,0.84877930359606,12.5864069423583,1.98581902401771,1.82839852397255,3.51983330145495,5.27641346454491,15.5042630311055,6.46142994238612,7.32602191132023,13.8717096203153,11.8454160987167,3.10422714917427,1.27006134691926,4.92051830067656,0,7.79899373328441,6.31691652362271,4.28755648150975,5.02237956884289,2.3440060335714,4.71171369576418,4.1176204162171,6.14740936462601,9.22469670759192,4.28049181116963,4.46058497365864,5.32285581268876,22.6893489860931,12.209408757305,18.2339531669612,13.026803237977,12.4587915246573,11.5002051491977,0.838913030288682,1.45072428402269,2.01656279485478,2.57259436035947,6.87680255853016,4.64104883049698,35.0007477287104,27.5075309221457,31.0577387718028,6.09920157724438,6.22506357277798,4.49949858640699,5.93319817540185,4.2628806896766,16.4780060785123,38.4218305321555,33.6991240002552,36.0465855345614,34.0726437389239,48.8463183330504,34.2346238475001,28.7853378155142,24.9198224647415,24.8189072384706,39.6417171597799,39.0723254540674,38.0944202475484,39.8296588945185,36.412082153759,50.5285969440057,44.1109138422182,34.8912818219642,41.866719890846,23.5702868378934,33.172601626191,32.9927019110782,1.51452386666368,2.72057616384428,10.4351215932604,0.860423876981386,0,4.85732872474035,1.29955283489534,1.34408066129201,6.60088774619234,5.79463096765396,7.79358013808606,8.48014978824817,9.29566570526091,20.5322363862909,35.6727335589304,42.6640021891999,1.29894624606728,1.52015919285059,3.0331466700887,2.8545969929765,0.776813650941515,7.86743337043571,4.3371331691534,6.08930956624282,4.15107895060905,6.0289056221049,8.46638691377075,9.17366116706631,5.93267922562497,4.77177877835708,0,9.54424414689714,4.85851340612866,1.93950101254089,7.45567044872489,35.1336956413857,29.1130922470703,8.9409969323007,2.39630249011841,2.39961092397363,2.1601938602421,37.148078572396,40.7175536508578,35.5601816479406,44.6728502894151,45.5173514047988,33.2460871295296,33.9084239811613,9.47106083807942,5.47390670684409,2.0217820674694,10.9429765060966,4.03373373184381,4.13823787980251,7.20248519221397,9.49440352365005,10.4776208693045,10.6334387836425,10.1197862524507,9.31332134660456,2.15567992932842,3.59301552318857,5.10258260075452,5.91828477554452,4.17070873838397,8.70630416305416,6.99659263787008,6.17006227137329,2.1066395619397,2.05878325691772,2.55747149456033,4.76389276831654,5.8631514995274,4.50155153652537,4.7348947117042,7.28027657465394,7.71335564436891,9.99895962426754,5.09719462659276,10.8591768401468,10.0381508447223,7.05920095540109,8.91756905004413,7.74859933354261,8.56245449635098,5.77087600669599,49.2078479640058,45.7925525087816,17.8426142811251,5.55346189993443,2.98603550749328,5.57368012465052,4.51036114627327,7.46229041106367,8.00560957841533,6.46767128782701,8.54152310780121,11.3642278759568,8.29406189040889,10.1467800740987,7.79856348476481,8.08937467788799,9.29393614461185,11.3510525754989,4.36236172192088,4.68418901699888,1.1270773567308,3.86937522906097,3.68509725618489,6.66290288958026,6.89278254654404,6.9376769550413,6.27994911365499,7.52722699922983,0.592905254174298,3.83743743147016,3.73462090715086,2.69834534861824,4.05720242777006,3.61765739628625,2.80088436959562,4.02774592431135,2.91843408195064,2.47105271869273,10.0637744569148,2.23284568601102,4.68056509671841,3.03094653536534,2.51156378930677,2.8946611281802,7.944387177164,3.60033682363921,6.68156403412306,7.46878377410828,3.28566347603903,8.37531287209079,7.61739650835244,9.17128144931655,9.77337893458384,10.6303051031412,11.3212885746816,7.04612253277673,9.15230403889247,9.11289069063523,3.01582567878545,3.80733978673097,4.91764273019036,3.03530420935206,26.6513979379735,26.3726294832457,4.26230857979356,8.83648245215305,5.99465616890888,7.02789739733949,7.97066571611356,5.73525115086125,5.79276552614225,8.49229592366497,7.69140333182299,6.42962887404886,6.32460444714438,31.4894890093371,5.96148357874728,10.1497394090335,12.7051828295789,5.27904393512113,3.98235415019888,5.82673526771955,6.65111825322452,7.73280826999182,3.54362271456927,7.07100840271033,7.49442050187841,4.36240475373007,9.26893183800275,6.0046984007805,4.21674434299995,3.09406629744561,15.3197822589205,3.78128297465751,5.82114077022395,7.07312215604255,7.62563004661776,10.8804978737263,9.87294123612726,14.0053876592716,1.17335854031855,1.0591603543191,3.30792597082443,6.76033637060068,4.68246837418126,6.51379589224083,6.08798954415996,6.07321329056727,11.3677526285642,23.5490133553347,0.854354403989263,4.12773735926445,2.96311243791539,2.44878994106098,1.91371918809435,0.915112692826091,3.56954702987096,3.49878630809145,3.73139929271944,6.68269432610579,5.53587988766987,6.30290348093231,5.29226170026826,4.59994251231831,7.42432716737004,5.7991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| |||
|short_description=p2@Thra | |||
}} |
Latest revision as of 03:19, 26 September 2015
Short description: | p2@Thra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Thra_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000064187, ENSMUST00000152195_5end |
EntrezGene: | Thra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.78e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.78e-13 | 23 |
ectodermal cell | 1.21e-11 | 44 |
neurectodermal cell | 1.21e-11 | 44 |
neural cell | 1.47e-11 | 43 |
neuron | 2.21e-10 | 33 |
neuronal stem cell | 2.21e-10 | 33 |
neuroblast | 2.21e-10 | 33 |
electrically signaling cell | 2.21e-10 | 33 |
electrically responsive cell | 9.55e-08 | 39 |
electrically active cell | 9.55e-08 | 39 |
embryonic cell | 1.67e-07 | 70 |