FFCP PHASE1:Mm9::chr10:59740429..59740440,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19156 | |EntrezGene=19156 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=866 | |||
|TSSclassifier=NA | |||
|UniProt=Q61207,Q8BFQ1,B2RUD7,Q3TXJ0,Q3UAS4,Q3UFE8 | |UniProt=Q61207,Q8BFQ1,B2RUD7,Q3TXJ0,Q3UAS4,Q3UFE8 | ||
|association_with_transcript=53bp_to_ENSMUST00000004316,NM_001146120,NM_001146121,NM_001146122,NM_001146123,NM_011179,uc007fen.2,uc007feo.2,uc007fep.2_5end | |association_with_transcript=53bp_to_ENSMUST00000004316,NM_001146120,NM_001146121,NM_001146122,NM_001146123,NM_011179,uc007fen.2,uc007feo.2,uc007fep.2_5end | ||
|cluster_id=chr10:59740429..59740440,+ | |||
|description=CAGE_peak_2_at_Psap_5end | |description=CAGE_peak_2_at_Psap_5end | ||
|id=chr10:59740429..59740440,+ | |id=chr10:59740429..59740440,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-07!50 | |ontology_enrichment_celltype=CL:0000055!1.29e-07!50 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.11e-13!75;UBERON:0001016!9.11e-13!75;UBERON:0001017!3.59e-12!73;UBERON:0005743!3.59e-12!73;UBERON:0004121!1.01e-11!102;UBERON:0000924!1.01e-11!102;UBERON:0006601!1.01e-11!102;UBERON:0001049!3.30e-10!52;UBERON:0005068!3.30e-10!52;UBERON:0006241!3.30e-10!52;UBERON:0007135!3.30e-10!52;UBERON:0000955!4.44e-10!50;UBERON:0006238!4.44e-10!50;UBERON:0002616!1.08e-09!49;UBERON:0002020!5.40e-08!34;UBERON:0002346!6.90e-08!71;UBERON:0003075!6.90e-08!71;UBERON:0007284!6.90e-08!71;UBERON:0000033!8.28e-08!63;UBERON:0007023!2.89e-07!51;UBERON:0004111!5.35e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.11e-13,75;UBERON:0001017,3.59e-12,73;UBERON:0004121,3.78e-11,95;UBERON:0000924,3.78e-11,95;UBERON:0006601,3.78e-11,95;UBERON:0000073,3.79e-11,54;UBERON:0001049,3.30e-10,52;UBERON:0005068,3.30e-10,52;UBERON:0006241,3.30e-10,52;UBERON:0007135,3.30e-10,52;UBERON:0000955,1.02e-08,47;UBERON:0006238,1.02e-08,47;UBERON:0002616,2.39e-08,46;UBERON:0002020,5.40e-08,34;UBERON:0010371,1.17e-07,73;UBERON:0002346,1.91e-07,64;UBERON:0003075,1.91e-07,64;UBERON:0007284,1.91e-07,64;UBERON:0007023,2.89e-07,51;UBERON:0004111,5.35e-07,122;UBERON:0010314,7.72e-07,92 | |||
|phase1_expression=40.0372117761985,23.3813523118372,25.9349566452036,29.6414927080693,29.5528480668345,33.7437336542898,35.7427340111154,19.8849918100027,5.63154888606667,3.04283884218592,1.19852577757853,1.7549874978974,22.0848941611255,22.4670434216823,18.6541466616771,18.4252493324742,16.7894850750755,26.0256286420546,29.4796032252338,24.6145998042858,61.9115152299788,25.8156473122302,18.8063848180033,41.9180147718725,42.2113077163593,26.988902313406,34.460959692726,34.6908684624281,68.9785012626637,52.4222669900656,52.7718615359625,10.1604907753541,9.22597181376855,15.8481681015439,21.3750198615943,29.5897668738116,24.5003227514843,51.0608589499027,53.1308034276184,56.5405643491702,57.6466858270394,54.6436387966757,35.4422557712742,159.763062011008,150.646119792199,130.134647282632,124.400223751338,74.7826286384932,126.319555072321,112.963771362159,89.0313641537306,92.0016411935818,22.1473039996212,17.4086914082723,22.8543783416875,80.5222034792514,110.315374376421,91.7896324253847,40.26097571106,62.4209355540999,41.8328726314078,97.58722523591,88.9294796111139,193.478439215501,310.50403784603,220.959315748237,153.095656474905,164.061216372304,27.996195323289,35.6415677195663,33.2313438935184,97.406985681697,114.409904212936,25.6005770359254,31.5331599649998,26.6573448116906,161.870345069101,111.343358810284,111.21113007752,42.863043512313,47.8480376040602,37.5057626800867,120.886238567598,86.6654419448787,111.542720877071,68.0592032444172,75.1722474619263,45.1086658897227,55.0529425532248,90.7614436882494,86.0897531443983,67.1130624045481,42.8381940235883,52.8909127805061,71.4754059192436,63.1717910807243,47.3297695844004,139.071143223695,157.170532784736,148.755960868853,53.0979692558086,114.210564898743,254.805239706646,220.430677977533,37.8859321769625,31.9233430498624,22.7486000256652,52.4104007910485,46.3498811728437,61.4550455728375,26.5432549952188,43.8430288769483,45.2006374621875,48.6834128984971,55.9722245965955,61.95362952553,72.9225154816403,90.2299987180249,38.9228642857945,36.3975412381671,36.6596920644253,43.1538975290348,42.8701050801681,78.1724728020831,109.12173424981,40.8731288333746,34.626570982211,21.5964983157627,37.231576532408,105.153028862186,87.8401157411763,46.2408015775341,121.850848454786,126.579151378514,105.348538591697,123.141118668428,52.0399149275116,68.6726477767713,78.5967778728728,115.532578881674,22.5108366325477,26.4387420098494,30.0703756774933,26.5240479390859,27.4867456571365,29.9786105466548,32.7956035959051,61.3126988651467,20.9100953144857,22.1254113796349,22.1698416446576,32.0025769344259,27.2486304241086,39.0042426504827,39.5101701903251,27.4667288209521,30.8973802417823,24.4480511758979,26.9955324425813,28.5833566098993,29.7848096175992,29.7102401410675,34.3279866598555,24.5955289684255,27.6138132068407,22.3232586960392,34.0707219777516,29.5416316188939,21.0636607889255,43.5043779809602,46.2092214411378,61.6963946934902,62.1326826273673,80.1212319999419,115.028601864578,57.0091552581236,33.7027158643474,29.618463466317,20.4756720513825,28.5651106388339,33.6344074050664,31.6643133658648,34.9133528836446,39.9473814836374,36.0642086773829,53.5271602853035,43.2296559136464,47.9485097619174,41.5273505563726,26.9645822596266,37.3918826283221,50.5818834066093,24.8464950248537,22.2784599588971,30.4310886317317,24.641810669283,32.1961128698259,34.2964159263658,56.0908084292162,59.3392794878001,66.4104618769015,84.6504544503552,59.5869780445169,15.1829046201646,17.6903095601883,17.7641068784034,19.0688514105193,25.0824246142514,22.4070749567649,22.1526025837124,47.6677566718604,41.4587733914003,80.5101956553185,74.0560485860322,49.9260276983297,43.9487247627974,51.8458525078326,82.4978421531358,44.7102720203183,19.5176154123599,20.0446921023692,17.8232340063948,22.0608833391192,21.9433197248779,25.4706695748035,21.4647012643579,27.9014205067958,31.2265212404773,25.5127629851979,34.9028860344522,37.6453260467652,50.6271705035291,125.156765669596,118.571439072479,78.1905194100268,85.2644546081623,119.931290720881,123.892752727959,50.9837680121461,78.0135165061512,30.2887890639606,28.5020283336546,35.1140138304462,37.0401636826456,37.6529759199246,35.9507194101817,37.2425845540903,33.3171678018896,36.3664755710802,92.2192178130586,48.6854492264361,44.1602697094793,42.8392703099905,50.4808576295959,17.2568679841952,28.8908957024428,22.6742667723563,28.2907619633847,37.5033403958581,28.8989039067292,28.1686839553361,28.7191646287229,32.0847640546249,23.0706833293146,20.0295356292498,24.7525303795648,72.8540756313106,19.2665370613502,22.2496936106338,24.2200849585699,30.3251799528288,48.3379495701611,38.0108237590899,66.068893957868,61.9533309288195,140.656495053577,54.0294575234657,40.7269044765456,44.5641817680699,34.9814964583304,40.9447139930758,24.7852758615042,41.098797964809,118.301342682705,26.8267282852629,50.3583957830263,31.8534587075904,23.5460571255864,26.5186801778789,25.1655990527175,23.457023339152,24.9113585136111,26.6725949442538,49.6428721367859,21.0363435731455,28.6680448648857,30.7815221342134,42.0267474989082,43.8908753129817,49.8998081623837,54.7165876901724,60.7273785402949,69.7328556309846,47.2217877946063,14.6560164057889,49.190943648469,42.5228320474741,51.7240160995167,54.3762856841248,47.8145835138902,54.6884732089214,36.1968189866181,55.8900305789039,26.3326691700347,35.1396607634596,22.4367895646007,25.1379266959804,25.8831612055365,30.401472576804,23.9895772194425,24.2391252833143,27.8853442886328,24.6641510381544,26.8570756862073,26.5961755225949,28.432984208589,28.5551590567475,28.6711288088182,29.4529793497554,28.3412979519014,37.2936401668429,38.5769583420745,42.4748079401118,74.9575624844899,75.6360376068263,49.8172418006961,40.5156236459434,50.1572104035363,101.655331671072,104.033503450622,112.287520634122,115.829044899645,117.14911088078,112.553690711065,122.179072541957,138.248609389836,137.755292331198,122.709193885181,5.81209146471389,23.9414924040619,22.5368359595457,25.2830985751026,10.8998844566551,11.7659845408009,32.6702689868374,28.0207677844896,24.0689407193861,37.6518845528058,34.4731847850726,33.1982360839494,37.1756784655433,33.1650289457223,34.2889749665011,31.4353836246829,27.0010479451513,29.5151107309469,25.549325849805,33.5613537906426,24.3437169193645,30.7033144655654,33.1426304026776,29.5053225763627,32.3736268628737,30.2074150173285,29.8172595782619,26.3069711437843,34.6300490306947,19.0788372363631,28.9469444222985,30.240876089298,20.8707832016542,31.2972419195651,35.8806296424923,56.9568117698517,44.680937213073,48.7757292689637,49.9262546699681,54.9272633607594,53.0977343570765 | |phase1_expression=40.0372117761985,23.3813523118372,25.9349566452036,29.6414927080693,29.5528480668345,33.7437336542898,35.7427340111154,19.8849918100027,5.63154888606667,3.04283884218592,1.19852577757853,1.7549874978974,22.0848941611255,22.4670434216823,18.6541466616771,18.4252493324742,16.7894850750755,26.0256286420546,29.4796032252338,24.6145998042858,61.9115152299788,25.8156473122302,18.8063848180033,41.9180147718725,42.2113077163593,26.988902313406,34.460959692726,34.6908684624281,68.9785012626637,52.4222669900656,52.7718615359625,10.1604907753541,9.22597181376855,15.8481681015439,21.3750198615943,29.5897668738116,24.5003227514843,51.0608589499027,53.1308034276184,56.5405643491702,57.6466858270394,54.6436387966757,35.4422557712742,159.763062011008,150.646119792199,130.134647282632,124.400223751338,74.7826286384932,126.319555072321,112.963771362159,89.0313641537306,92.0016411935818,22.1473039996212,17.4086914082723,22.8543783416875,80.5222034792514,110.315374376421,91.7896324253847,40.26097571106,62.4209355540999,41.8328726314078,97.58722523591,88.9294796111139,193.478439215501,310.50403784603,220.959315748237,153.095656474905,164.061216372304,27.996195323289,35.6415677195663,33.2313438935184,97.406985681697,114.409904212936,25.6005770359254,31.5331599649998,26.6573448116906,161.870345069101,111.343358810284,111.21113007752,42.863043512313,47.8480376040602,37.5057626800867,120.886238567598,86.6654419448787,111.542720877071,68.0592032444172,75.1722474619263,45.1086658897227,55.0529425532248,90.7614436882494,86.0897531443983,67.1130624045481,42.8381940235883,52.8909127805061,71.4754059192436,63.1717910807243,47.3297695844004,139.071143223695,157.170532784736,148.755960868853,53.0979692558086,114.210564898743,254.805239706646,220.430677977533,37.8859321769625,31.9233430498624,22.7486000256652,52.4104007910485,46.3498811728437,61.4550455728375,26.5432549952188,43.8430288769483,45.2006374621875,48.6834128984971,55.9722245965955,61.95362952553,72.9225154816403,90.2299987180249,38.9228642857945,36.3975412381671,36.6596920644253,43.1538975290348,42.8701050801681,78.1724728020831,109.12173424981,40.8731288333746,34.626570982211,21.5964983157627,37.231576532408,105.153028862186,87.8401157411763,46.2408015775341,121.850848454786,126.579151378514,105.348538591697,123.141118668428,52.0399149275116,68.6726477767713,78.5967778728728,115.532578881674,22.5108366325477,26.4387420098494,30.0703756774933,26.5240479390859,27.4867456571365,29.9786105466548,32.7956035959051,61.3126988651467,20.9100953144857,22.1254113796349,22.1698416446576,32.0025769344259,27.2486304241086,39.0042426504827,39.5101701903251,27.4667288209521,30.8973802417823,24.4480511758979,26.9955324425813,28.5833566098993,29.7848096175992,29.7102401410675,34.3279866598555,24.5955289684255,27.6138132068407,22.3232586960392,34.0707219777516,29.5416316188939,21.0636607889255,43.5043779809602,46.2092214411378,61.6963946934902,62.1326826273673,80.1212319999419,115.028601864578,57.0091552581236,33.7027158643474,29.618463466317,20.4756720513825,28.5651106388339,33.6344074050664,31.6643133658648,34.9133528836446,39.9473814836374,36.0642086773829,53.5271602853035,43.2296559136464,47.9485097619174,41.5273505563726,26.9645822596266,37.3918826283221,50.5818834066093,24.8464950248537,22.2784599588971,30.4310886317317,24.641810669283,32.1961128698259,34.2964159263658,56.0908084292162,59.3392794878001,66.4104618769015,84.6504544503552,59.5869780445169,15.1829046201646,17.6903095601883,17.7641068784034,19.0688514105193,25.0824246142514,22.4070749567649,22.1526025837124,47.6677566718604,41.4587733914003,80.5101956553185,74.0560485860322,49.9260276983297,43.9487247627974,51.8458525078326,82.4978421531358,44.7102720203183,19.5176154123599,20.0446921023692,17.8232340063948,22.0608833391192,21.9433197248779,25.4706695748035,21.4647012643579,27.9014205067958,31.2265212404773,25.5127629851979,34.9028860344522,37.6453260467652,50.6271705035291,125.156765669596,118.571439072479,78.1905194100268,85.2644546081623,119.931290720881,123.892752727959,50.9837680121461,78.0135165061512,30.2887890639606,28.5020283336546,35.1140138304462,37.0401636826456,37.6529759199246,35.9507194101817,37.2425845540903,33.3171678018896,36.3664755710802,92.2192178130586,48.6854492264361,44.1602697094793,42.8392703099905,50.4808576295959,17.2568679841952,28.8908957024428,22.6742667723563,28.2907619633847,37.5033403958581,28.8989039067292,28.1686839553361,28.7191646287229,32.0847640546249,23.0706833293146,20.0295356292498,24.7525303795648,72.8540756313106,19.2665370613502,22.2496936106338,24.2200849585699,30.3251799528288,48.3379495701611,38.0108237590899,66.068893957868,61.9533309288195,140.656495053577,54.0294575234657,40.7269044765456,44.5641817680699,34.9814964583304,40.9447139930758,24.7852758615042,41.098797964809,118.301342682705,26.8267282852629,50.3583957830263,31.8534587075904,23.5460571255864,26.5186801778789,25.1655990527175,23.457023339152,24.9113585136111,26.6725949442538,49.6428721367859,21.0363435731455,28.6680448648857,30.7815221342134,42.0267474989082,43.8908753129817,49.8998081623837,54.7165876901724,60.7273785402949,69.7328556309846,47.2217877946063,14.6560164057889,49.190943648469,42.5228320474741,51.7240160995167,54.3762856841248,47.8145835138902,54.6884732089214,36.1968189866181,55.8900305789039,26.3326691700347,35.1396607634596,22.4367895646007,25.1379266959804,25.8831612055365,30.401472576804,23.9895772194425,24.2391252833143,27.8853442886328,24.6641510381544,26.8570756862073,26.5961755225949,28.432984208589,28.5551590567475,28.6711288088182,29.4529793497554,28.3412979519014,37.2936401668429,38.5769583420745,42.4748079401118,74.9575624844899,75.6360376068263,49.8172418006961,40.5156236459434,50.1572104035363,101.655331671072,104.033503450622,112.287520634122,115.829044899645,117.14911088078,112.553690711065,122.179072541957,138.248609389836,137.755292331198,122.709193885181,5.81209146471389,23.9414924040619,22.5368359595457,25.2830985751026,10.8998844566551,11.7659845408009,32.6702689868374,28.0207677844896,24.0689407193861,37.6518845528058,34.4731847850726,33.1982360839494,37.1756784655433,33.1650289457223,34.2889749665011,31.4353836246829,27.0010479451513,29.5151107309469,25.549325849805,33.5613537906426,24.3437169193645,30.7033144655654,33.1426304026776,29.5053225763627,32.3736268628737,30.2074150173285,29.8172595782619,26.3069711437843,34.6300490306947,19.0788372363631,28.9469444222985,30.240876089298,20.8707832016542,31.2972419195651,35.8806296424923,56.9568117698517,44.680937213073,48.7757292689637,49.9262546699681,54.9272633607594,53.0977343570765 | ||
|short_description=p2@Psap | |short_description=p2@Psap | ||
}} | }} |
Latest revision as of 03:16, 26 September 2015
Short description: | p2@Psap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psap_5end |
Coexpression cluster: | MCL_coexpression_mm9:866 |
Association with transcript: | 53bp_to_ENSMUST00000004316, NM_001146120, NM_001146121, NM_001146122, NM_001146123, NM_011179, uc007fen.2, uc007feo.2, uc007fep.2_5end |
EntrezGene: | Psap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 9.11e-13 | 75 |
central nervous system | 3.59e-12 | 73 |
ectoderm-derived structure | 3.78e-11 | 95 |
ectoderm | 3.78e-11 | 95 |
presumptive ectoderm | 3.78e-11 | 95 |
regional part of nervous system | 3.79e-11 | 54 |
neural tube | 3.30e-10 | 52 |
neural rod | 3.30e-10 | 52 |
future spinal cord | 3.30e-10 | 52 |
neural keel | 3.30e-10 | 52 |
brain | 1.02e-08 | 47 |
future brain | 1.02e-08 | 47 |
regional part of brain | 2.39e-08 | 46 |
gray matter | 5.40e-08 | 34 |
ecto-epithelium | 1.17e-07 | 73 |
neurectoderm | 1.91e-07 | 64 |
neural plate | 1.91e-07 | 64 |
presumptive neural plate | 1.91e-07 | 64 |
adult organism | 2.89e-07 | 51 |
anatomical conduit | 5.35e-07 | 122 |
structure with developmental contribution from neural crest | 7.72e-07 | 92 |