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FFCP PHASE1:Mm9::chr9:107134147..107134225,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=208869
|EntrezGene=208869
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000167053,ENSMUST00000169164_5end
|association_with_transcript=0bp_to_ENSMUST00000167053,ENSMUST00000169164_5end
|cluster_id=chr9:107134147..107134225,-
|description=CAGE_peak_1_at_Dock3_5end
|description=CAGE_peak_1_at_Dock3_5end
|id=chr9:107134147..107134225,-
|id=chr9:107134147..107134225,-
|ontology_enrichment_celltype=CL:0000221!1.65e-13!44;CL:0000133!1.65e-13!44;CL:0000540!1.74e-13!33;CL:0000047!1.74e-13!33;CL:0000031!1.74e-13!33;CL:0000404!1.74e-13!33;CL:0002319!3.09e-13!43;CL:0000117!6.45e-13!23;CL:0000337!6.45e-13!23;CL:0000393!6.44e-09!39;CL:0000211!6.44e-09!39;CL:0000055!1.06e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.13e-15,33;CL:0000047,1.13e-15,33;CL:0000031,1.13e-15,33;CL:0000404,1.13e-15,33;CL:0000117,5.31e-15,23;CL:0000337,5.31e-15,23;CL:0000221,1.08e-14,44;CL:0000133,1.08e-14,44;CL:0002319,2.26e-14,43;CL:0000393,3.78e-11,39;CL:0000211,3.78e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.99e-32!102;UBERON:0000924!5.99e-32!102;UBERON:0006601!5.99e-32!102;UBERON:0000073!2.38e-30!75;UBERON:0001016!2.38e-30!75;UBERON:0001017!2.58e-30!73;UBERON:0005743!2.58e-30!73;UBERON:0002346!1.67e-27!71;UBERON:0003075!1.67e-27!71;UBERON:0007284!1.67e-27!71;UBERON:0000033!2.49e-26!63;UBERON:0001049!2.06e-24!52;UBERON:0005068!2.06e-24!52;UBERON:0006241!2.06e-24!52;UBERON:0007135!2.06e-24!52;UBERON:0000955!1.40e-23!50;UBERON:0006238!1.40e-23!50;UBERON:0002616!8.21e-23!49;UBERON:0003056!1.22e-21!49;UBERON:0002020!2.52e-19!34;UBERON:0003080!1.35e-18!40;UBERON:0002780!5.92e-18!39;UBERON:0001890!5.92e-18!39;UBERON:0006240!5.92e-18!39;UBERON:0002791!1.39e-16!29;UBERON:0003528!1.39e-16!29;UBERON:0001893!1.39e-16!29;UBERON:0007811!5.74e-14!86;UBERON:0000153!2.41e-12!94;UBERON:0000956!4.08e-12!21;UBERON:0001869!4.08e-12!21;UBERON:0000203!4.08e-12!21;UBERON:0002619!4.47e-10!17;UBERON:0002021!3.35e-08!10;UBERON:0000411!3.35e-08!10;UBERON:0001950!3.35e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.00e-34,95;UBERON:0000924,1.00e-34,95;UBERON:0006601,1.00e-34,95;UBERON:0001016,2.14e-34,75;UBERON:0001017,2.42e-34,73;UBERON:0002346,3.59e-32,64;UBERON:0003075,3.59e-32,64;UBERON:0007284,3.59e-32,64;UBERON:0010371,3.17e-30,73;UBERON:0000073,1.51e-29,54;UBERON:0001049,6.10e-28,52;UBERON:0005068,6.10e-28,52;UBERON:0006241,6.10e-28,52;UBERON:0007135,6.10e-28,52;UBERON:0003056,2.47e-25,49;UBERON:0000955,1.21e-24,47;UBERON:0006238,1.21e-24,47;UBERON:0002616,9.35e-24,46;UBERON:0002020,1.36e-22,34;UBERON:0003080,9.93e-22,40;UBERON:0002780,5.73e-21,39;UBERON:0001890,5.73e-21,39;UBERON:0006240,5.73e-21,39;UBERON:0003528,2.41e-19,29;UBERON:0002791,2.41e-19,29;UBERON:0001893,2.41e-19,29;UBERON:0010314,3.54e-19,92;UBERON:0000956,4.72e-14,21;UBERON:0001869,4.72e-14,21;UBERON:0000203,4.72e-14,21;UBERON:0002619,1.22e-11,17;UBERON:0002021,2.01e-09,10;UBERON:0000411,2.01e-09,10;UBERON:0001950,2.01e-09,10
|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.563154888606667,0.234064526321993,0.856089841127525,0.797721589953364,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0,0,0,28.3194156203062,0,0,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,1.96222640742402,1.09843091367236,2.52758868796568,0.699932108126813,2.87505128729943,0,0,0,0,0,0,46.3304695368479,43.3772603003067,42.466704034914,0.338844532069132,0,0,0,0,2.39680088414724,4.61061966385865,37.7430188802859,34.5615202129128,32.8106939708156,43.1332986449743,45.2780508950808,36.7472397644862,31.2456235519451,32.1726575313507,66.0695285996332,95.5101288877204,87.709330489315,54.4690368325701,51.4160557045542,42.7148963856543,65.8871877643259,50.6486349028512,66.3144395351356,52.1492596288392,55.5249555116501,52.5646437227348,1.8931548333296,1.66257432234928,0.869593466105033,0,0,0,0,0,2.80888840263504,0,0,0,8.30976176682415,0,0,0,0.216491041011214,0.253359865475099,0,2.16949371466214,1.29468941823586,5.19547486726887,0.867426633830679,1.21786191324856,0.461230994512117,1.3565037649736,2.82212897125692,1.75933227861546,0,1.59059292611903,1.76922110389975,0.485300549842228,0,0,1.86391761218122,102.18049815703,111.844541438385,0.766371165625774,0,0,0,94.3681028250383,140.910185668137,55.1622605775475,158.180131374972,155.986428971502,78.3360927989542,112.595436569024,0.611036183101898,0.124406970610093,0,9.46988351489133,3.513251959993,7.35686734187113,7.20248519221397,11.6042709733501,24.0849206995701,18.9608306021578,18.3655380137068,21.9897865128163,0,0.378212160335639,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,2.38841120182192,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.700592054203017,0.658239399653922,0,0.810688095458557,0.584799949701329,1.3173006917463,0.402619256281115,82.643949785702,42.9112233621616,0,0.264450566663544,0,0,1.28867461322093,1.21010114774006,1.11189021922435,0.380451252225118,0,0.494096864172033,0.754005626400808,1.1937388322469,0.779856348476481,0,0.432276099749388,0.796565093017469,0.189667900953082,1.02823661348756,1.1270773567308,0.203651327845314,0.581857461502877,0.561086559122548,0.126473074248515,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.568474235311454,0.651859905768103,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.275936746304732,75.4587772942622,79.4695235095137,0,0,3.15508219416257,3.12350995437311,2.15423397732799,3.34556317133573,1.78238939265915,5.66153061577665,2.83367491172426,6.42962887404886,6.32460444714438,169.657655070714,1.27746076687442,1.6025904330053,1.62886959353576,0.824850614862677,0,0,0.302323556964751,0.377210159511796,0,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,12.9367050186439,2.16073312837572,1.03486947026204,1.28602221018955,1.95074257006501,5.17269571046005,4.93647061806363,3.65357938937519,0.469343416127421,0.21183207086382,0.882113592219848,1.31909002353184,0.484393280087717,1.44751019827574,2.626191568069,2.46211349617592,1.45740418314925,73.6138448981723,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.690999869022119,0,0.474503990371703,0.609958401380546,1.18805874903981,0.836353184057875,0.218362563746178,0.809186078308924,0.909188012978695,0.523511883968059,0.129614973291793,0.621339313086926,16.9107881605257,1.04661582230785,1.48912641411388,6.61134040369762,3.87479470433193,2.36538575687089,1.99507305697782,8.07267186032491,24.1176492179135,28.2653421366427,22.1783104818556,0.316011120628178,0.405450430580328,0.821687657318618,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.226730383615211,2.44184548711471,0.62799699626633,0.335769232728157,11.5913756419314,0.187682475451182,0.36630324853453,0,0,136.105194070713,143.621473790239,132.338863604501,114.969778987927,179.491620179908,191.114656039594,167.405580057488,166.618845192962,151.349564600724,149.114969784524,1.3492355185943,7.98049746802062,7.85374586469017,7.53630822911712,6.49800804146745,9.37601893095072,7.3341420174533,9.27157757575024,11.2321723357135,10.1078884705519,10.6461305953901,11.8834595073228,6.367622507952,10.308049537184,8.55788487438638,10.9547548995107,10.429589335037,10.6100071255038,13.1867488257058,10.4511233295422,7.88599280486455,8.69631450180754,8.10683045820891,8.1393993314104,11.0107975085937,9.81529451543447,9.3293266165114,6.83981249738391,8.55565917228929,7.2948495315506,11.1516917036724,9.55493479042966,6.13846564754534,8.6764631064141,6.75173138433995,14.2392029424629,9.12333272937093,7.52048689169044,3.82576664137687,2.64709702943419,2.08681052058379
|phase1_expression=4.64431656603902,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.563154888606667,0.234064526321993,0.856089841127525,0.797721589953364,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0,0,0,28.3194156203062,0,0,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,1.96222640742402,1.09843091367236,2.52758868796568,0.699932108126813,2.87505128729943,0,0,0,0,0,0,46.3304695368479,43.3772603003067,42.466704034914,0.338844532069132,0,0,0,0,2.39680088414724,4.61061966385865,37.7430188802859,34.5615202129128,32.8106939708156,43.1332986449743,45.2780508950808,36.7472397644862,31.2456235519451,32.1726575313507,66.0695285996332,95.5101288877204,87.709330489315,54.4690368325701,51.4160557045542,42.7148963856543,65.8871877643259,50.6486349028512,66.3144395351356,52.1492596288392,55.5249555116501,52.5646437227348,1.8931548333296,1.66257432234928,0.869593466105033,0,0,0,0,0,2.80888840263504,0,0,0,8.30976176682415,0,0,0,0.216491041011214,0.253359865475099,0,2.16949371466214,1.29468941823586,5.19547486726887,0.867426633830679,1.21786191324856,0.461230994512117,1.3565037649736,2.82212897125692,1.75933227861546,0,1.59059292611903,1.76922110389975,0.485300549842228,0,0,1.86391761218122,102.18049815703,111.844541438385,0.766371165625774,0,0,0,94.3681028250383,140.910185668137,55.1622605775475,158.180131374972,155.986428971502,78.3360927989542,112.595436569024,0.611036183101898,0.124406970610093,0,9.46988351489133,3.513251959993,7.35686734187113,7.20248519221397,11.6042709733501,24.0849206995701,18.9608306021578,18.3655380137068,21.9897865128163,0,0.378212160335639,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,2.38841120182192,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.700592054203017,0.658239399653922,0,0.810688095458557,0.584799949701329,1.3173006917463,0.402619256281115,82.643949785702,42.9112233621616,0,0.264450566663544,0,0,1.28867461322093,1.21010114774006,1.11189021922435,0.380451252225118,0,0.494096864172033,0.754005626400808,1.1937388322469,0.779856348476481,0,0.432276099749388,0.796565093017469,0.189667900953082,1.02823661348756,1.1270773567308,0.203651327845314,0.581857461502877,0.561086559122548,0.126473074248515,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.568474235311454,0.651859905768103,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.275936746304732,75.4587772942622,79.4695235095137,0,0,3.15508219416257,3.12350995437311,2.15423397732799,3.34556317133573,1.78238939265915,5.66153061577665,2.83367491172426,6.42962887404886,6.32460444714438,169.657655070714,1.27746076687442,1.6025904330053,1.62886959353576,0.824850614862677,0,0,0.302323556964751,0.377210159511796,0,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,12.9367050186439,2.16073312837572,1.03486947026204,1.28602221018955,1.95074257006501,5.17269571046005,4.93647061806363,3.65357938937519,0.469343416127421,0.21183207086382,0.882113592219848,1.31909002353184,0.484393280087717,1.44751019827574,2.626191568069,2.46211349617592,1.45740418314925,73.6138448981723,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.690999869022119,0,0.474503990371703,0.609958401380546,1.18805874903981,0.836353184057875,0.218362563746178,0.809186078308924,0.909188012978695,0.523511883968059,0.129614973291793,0.621339313086926,16.9107881605257,1.04661582230785,1.48912641411388,6.61134040369762,3.87479470433193,2.36538575687089,1.99507305697782,8.07267186032491,24.1176492179135,28.2653421366427,22.1783104818556,0.316011120628178,0.405450430580328,0.821687657318618,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0.226730383615211,2.44184548711471,0.62799699626633,0.335769232728157,11.5913756419314,0.187682475451182,0.36630324853453,0,0,136.105194070713,143.621473790239,132.338863604501,114.969778987927,179.491620179908,191.114656039594,167.405580057488,166.618845192962,151.349564600724,149.114969784524,1.3492355185943,7.98049746802062,7.85374586469017,7.53630822911712,6.49800804146745,9.37601893095072,7.3341420174533,9.27157757575024,11.2321723357135,10.1078884705519,10.6461305953901,11.8834595073228,6.367622507952,10.308049537184,8.55788487438638,10.9547548995107,10.429589335037,10.6100071255038,13.1867488257058,10.4511233295422,7.88599280486455,8.69631450180754,8.10683045820891,8.1393993314104,11.0107975085937,9.81529451543447,9.3293266165114,6.83981249738391,8.55565917228929,7.2948495315506,11.1516917036724,9.55493479042966,6.13846564754534,8.6764631064141,6.75173138433995,14.2392029424629,9.12333272937093,7.52048689169044,3.82576664137687,2.64709702943419,2.08681052058379
|short_description=p1@Dock3
|short_description=p1@Dock3
}}
}}

Latest revision as of 03:12, 26 September 2015

Short description:p1@Dock3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dock3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000167053, ENSMUST00000169164_5end
EntrezGene:Dock3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dock3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A328.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C346.33
Mouse Granule cells, donor2.CNhs12357.11731-123E343.38
Mouse Granule cells, donor3.CNhs12108.11636-122C742.47
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D932.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F143.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D545.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D236.75
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D366.07
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F395.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D787.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D454.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F451.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E465.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E550.65
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I666.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D652.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2102.18
cerebellum, neonate N30.CNhs11135.1395-42I2111.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A494.37
corpus striatum, adult.CNhs10487.19-21D8140.91
corpus striatum, neonate N00.CNhs11226.630-43F155.16
cortex, adult.CNhs10473.12-14D5158.18
cortex, neonate N30.CNhs11107.1392-42F2155.99
diencephalon, adult.CNhs10482.20-12F278.34
diencephalon, neonate N30.CNhs11201.1388-42B2112.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C624.08
eyeball, neonate N01.CNhs11140.1532-43E718.96
eyeball, neonate N02.CNhs11205.1551-44G818.37
eyeball, neonate N16.CNhs11188.777-19A221.99
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E882.64
hippocampus, neonate N00.CNhs11228.627-43G142.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C275.46
medulla oblongata, neonate N30.CNhs11200.1396-42A379.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I9169.66
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C973.61
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G516.91
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I48.07
testis, neonate N10.CNhs11204.763-44D924.12
testis, neonate N20.CNhs11110.839-18H328.27
testis, neonate N30.CNhs11130.1391-42E222.18
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E411.59
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1136.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2143.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3132.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7114.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4179.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5191.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6167.41
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7166.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8151.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9149.11
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.13e-1533
neuronal stem cell1.13e-1533
neuroblast1.13e-1533
electrically signaling cell1.13e-1533
CNS neuron (sensu Vertebrata)5.31e-1523
neuroblast (sensu Vertebrata)5.31e-1523
ectodermal cell1.08e-1444
neurectodermal cell1.08e-1444
neural cell2.26e-1443
electrically responsive cell3.78e-1139
electrically active cell3.78e-1139

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.00e-3495
ectoderm1.00e-3495
presumptive ectoderm1.00e-3495
nervous system2.14e-3475
central nervous system2.42e-3473
neurectoderm3.59e-3264
neural plate3.59e-3264
presumptive neural plate3.59e-3264
ecto-epithelium3.17e-3073
regional part of nervous system1.51e-2954
neural tube6.10e-2852
neural rod6.10e-2852
future spinal cord6.10e-2852
neural keel6.10e-2852
pre-chordal neural plate2.47e-2549
brain1.21e-2447
future brain1.21e-2447
regional part of brain9.35e-2446
gray matter1.36e-2234
anterior neural tube9.93e-2240
regional part of forebrain5.73e-2139
forebrain5.73e-2139
future forebrain5.73e-2139
brain grey matter2.41e-1929
regional part of telencephalon2.41e-1929
telencephalon2.41e-1929
structure with developmental contribution from neural crest3.54e-1992
cerebral cortex4.72e-1421
cerebral hemisphere4.72e-1421
pallium4.72e-1421
regional part of cerebral cortex1.22e-1117
occipital lobe2.01e-0910
visual cortex2.01e-0910
neocortex2.01e-0910
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