FFCP PHASE1:Mm9::chr17:26978409..26978442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18091 | |EntrezGene=18091 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |MCL_coexpression_id=19 | ||
|TSSclassifier=NA | |||
|UniProt=P42582,Q3UQU2 | |UniProt=P42582,Q3UQU2 | ||
|association_with_transcript=67bp_to_ENSMUST00000015723,NM_008700,uc008beo.1_5end | |association_with_transcript=67bp_to_ENSMUST00000015723,NM_008700,uc008beo.1_5end | ||
|cluster_id=chr17:26978409..26978442,- | |||
|description=CAGE_peak_1_at_Nkx2-5_5end | |description=CAGE_peak_1_at_Nkx2-5_5end | ||
|id=chr17:26978409..26978442,- | |id=chr17:26978409..26978442,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.80e-18!18;UBERON:0000948!8.80e-18!18;UBERON:0005498!8.80e-18!18;UBERON:0004140!8.80e-18!18;UBERON:0009881!8.80e-18!18;UBERON:0004141!8.80e-18!18;UBERON:0003084!8.80e-18!18;UBERON:0007005!8.80e-18!18;UBERON:0004139!8.80e-18!18;UBERON:0004291!8.80e-18!18;UBERON:0004872!8.24e-15!33;UBERON:0004535!2.73e-12!23;UBERON:0001009!2.73e-12!23;UBERON:0000945!3.87e-07!16;UBERON:0010039!3.87e-07!16;UBERON:0002048!8.10e-07!14;UBERON:0000117!8.10e-07!14;UBERON:0000171!8.10e-07!14;UBERON:0000170!8.10e-07!14;UBERON:0005597!8.10e-07!14;UBERON:0000118!8.10e-07!14 | |ontology_enrichment_uberon=UBERON:0007100!8.80e-18!18;UBERON:0000948!8.80e-18!18;UBERON:0005498!8.80e-18!18;UBERON:0004140!8.80e-18!18;UBERON:0009881!8.80e-18!18;UBERON:0004141!8.80e-18!18;UBERON:0003084!8.80e-18!18;UBERON:0007005!8.80e-18!18;UBERON:0004139!8.80e-18!18;UBERON:0004291!8.80e-18!18;UBERON:0004872!8.24e-15!33;UBERON:0004535!2.73e-12!23;UBERON:0001009!2.73e-12!23;UBERON:0000945!3.87e-07!16;UBERON:0010039!3.87e-07!16;UBERON:0002048!8.10e-07!14;UBERON:0000117!8.10e-07!14;UBERON:0000171!8.10e-07!14;UBERON:0000170!8.10e-07!14;UBERON:0005597!8.10e-07!14;UBERON:0000118!8.10e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.25e-21,18;UBERON:0000948,5.25e-21,18;UBERON:0005498,5.25e-21,18;UBERON:0004140,5.25e-21,18;UBERON:0009881,5.25e-21,18;UBERON:0004141,5.25e-21,18;UBERON:0003084,5.25e-21,18;UBERON:0007005,5.25e-21,18;UBERON:0004139,5.25e-21,18;UBERON:0004291,5.25e-21,18;UBERON:0004872,6.33e-18,33;UBERON:0004535,3.82e-15,23;UBERON:0001009,3.82e-15,23;UBERON:0002106,6.95e-08,6;UBERON:0004457,6.95e-08,6;UBERON:0000042,6.95e-08,6;UBERON:0004854,6.95e-08,6;UBERON:0009034,6.95e-08,6;UBERON:0002095,6.95e-08,6;UBERON:0004782,6.95e-08,6;UBERON:0003281,6.95e-08,6;UBERON:0009664,6.95e-08,6;UBERON:0002296,6.95e-08,6;UBERON:0005602,6.95e-08,6;UBERON:0001179,6.95e-08,6;UBERON:0006293,6.95e-08,6;UBERON:0003103,3.05e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.771778308107841,1.14613375975503,7.73508138416164,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,125.932469701585,55.1136240955576,82.2883620876838,111.980259931804,89.1341969815739,89.4749254746794,98.1293246846721,118.308570017232,109.992952509874,106.141103194195,65.3386507034799,80.9877407363099,74.1233936246435,61.6935823967852,79.5844063249005,0,0,0,0,1.2797295032114,0.464473343720877,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0,0,0,1.22190796707189,0,0,0,0,0,0,0,3.33690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,9.09558776498327,3.7481944581666,2.37643120085263,0.704070744865506,2.84760637651087,2.61848004974615,1.95133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0,0.518054945597687,0.723245292907558,0,0,0,0,0,0,2.95082901678016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15614827001476,1.209294227859,0.377210159511796,2.06711325016541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,3.75915937755276,59.6458048413713,28.1495681601962,4.33247451110789,2.46049609897845,5.49067615695654,0,0,0,0,7.75023184273782,6.91286188231286,1.72808545314882,1.25452977608681,0.87345025498471,0.404593039154462,0.743881101528023,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.389762468933385,0.179026695667481,1.58945083825012,0,0,0,0,0,0,0,0,5.66825959038028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66059756134683,1.19707462020309,1.36586884603307,1.45864030240976,1.88651846365184,3.30918315210025,1.77797382241292,2.88449080134452,1.60459604795908,2.27427490587418,2.78827229879264,3.01802146217722,2.52832070168682,2.17685518176556,2.12511235135769,5.23923060411381,2.78122382267653,2.50781986602817,3.29668720642645,2.06078488188156,1.71434626192708,2.12970967391205,2.86123427936785,2.18019624948493,2.25862512996793,2.5384382367503,1.82927972872773,2.10455769150274,2.58027816307137,0.561142271657738,3.08451047122853,2.56111654176465,2.04615521584845,2.63392630016142,1.54325288784913,5.9954538705107,1.63752125911786,2.57845264857958,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0.771778308107841,1.14613375975503,7.73508138416164,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,125.932469701585,55.1136240955576,82.2883620876838,111.980259931804,89.1341969815739,89.4749254746794,98.1293246846721,118.308570017232,109.992952509874,106.141103194195,65.3386507034799,80.9877407363099,74.1233936246435,61.6935823967852,79.5844063249005,0,0,0,0,1.2797295032114,0.464473343720877,0.128867461322093,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0.898819408654221,0,0.199141273254367,0,0,0,1.22190796707189,0,0,0,0,0,0,0,3.33690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,9.09558776498327,3.7481944581666,2.37643120085263,0.704070744865506,2.84760637651087,2.61848004974615,1.95133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0,0.518054945597687,0.723245292907558,0,0,0,0,0,0,2.95082901678016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15614827001476,1.209294227859,0.377210159511796,2.06711325016541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,3.75915937755276,59.6458048413713,28.1495681601962,4.33247451110789,2.46049609897845,5.49067615695654,0,0,0,0,7.75023184273782,6.91286188231286,1.72808545314882,1.25452977608681,0.87345025498471,0.404593039154462,0.743881101528023,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.389762468933385,0.179026695667481,1.58945083825012,0,0,0,0,0,0,0,0,5.66825959038028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66059756134683,1.19707462020309,1.36586884603307,1.45864030240976,1.88651846365184,3.30918315210025,1.77797382241292,2.88449080134452,1.60459604795908,2.27427490587418,2.78827229879264,3.01802146217722,2.52832070168682,2.17685518176556,2.12511235135769,5.23923060411381,2.78122382267653,2.50781986602817,3.29668720642645,2.06078488188156,1.71434626192708,2.12970967391205,2.86123427936785,2.18019624948493,2.25862512996793,2.5384382367503,1.82927972872773,2.10455769150274,2.58027816307137,0.561142271657738,3.08451047122853,2.56111654176465,2.04615521584845,2.63392630016142,1.54325288784913,5.9954538705107,1.63752125911786,2.57845264857958,0,0,0 | ||
|short_description=p1@Nkx2-5 | |short_description=p1@Nkx2-5 | ||
}} | }} |
Latest revision as of 03:11, 26 September 2015
Short description: | p1@Nkx2-5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nkx2-5_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 67bp_to_ENSMUST00000015723, NM_008700, uc008beo.1_5end |
EntrezGene: | Nkx2-5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.25e-21 | 18 |
heart | 5.25e-21 | 18 |
primitive heart tube | 5.25e-21 | 18 |
primary heart field | 5.25e-21 | 18 |
anterior lateral plate mesoderm | 5.25e-21 | 18 |
heart tube | 5.25e-21 | 18 |
heart primordium | 5.25e-21 | 18 |
cardiac mesoderm | 5.25e-21 | 18 |
cardiogenic plate | 5.25e-21 | 18 |
heart rudiment | 5.25e-21 | 18 |
splanchnic layer of lateral plate mesoderm | 6.33e-18 | 33 |
cardiovascular system | 3.82e-15 | 23 |
circulatory system | 3.82e-15 | 23 |
spleen | 6.95e-08 | 6 |
cavity lining | 6.95e-08 | 6 |
serous membrane | 6.95e-08 | 6 |
gastrointestinal system mesentery | 6.95e-08 | 6 |
stomach region | 6.95e-08 | 6 |
mesentery | 6.95e-08 | 6 |
gastrointestinal system serosa | 6.95e-08 | 6 |
mesentery of stomach | 6.95e-08 | 6 |
gut mesentery | 6.95e-08 | 6 |
dorsal mesentery | 6.95e-08 | 6 |
dorsal mesogastrium | 6.95e-08 | 6 |
peritoneal cavity | 6.95e-08 | 6 |
spleen primordium | 6.95e-08 | 6 |
compound organ | 3.05e-07 | 43 |