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FFCP PHASE1:Mm9::chr2:164268796..164268841,-: Difference between revisions

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{{FFCP|EntrezGene=20971|HGNC=|UniProt=O35988,Q3U5S6|association_with_transcript=-108bp_to_NM_011521,uc008nuq.1_5end|description=CAGE_peak_2_at_Sdc4_5end|id=chr2:164268796..164268841,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!2.31e-09!26;UBERON:0000990!2.31e-09!26;UBERON:0000464!3.15e-08!57;UBERON:0003133!3.66e-08!24;UBERON:0004176!7.99e-08!17;UBERON:0009196!7.99e-08!17;UBERON:0009117!7.99e-08!17;UBERON:0000991!1.32e-07!18;UBERON:0005564!1.32e-07!18;UBERON:0002553!1.60e-07!39;UBERON:0003886!4.46e-07!38;UBERON:0002323!4.62e-07!37;UBERON:0004458!4.62e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.82e-09,26;UBERON:0000990,1.82e-09,26;UBERON:0003133,3.12e-08,24;UBERON:0004176,7.40e-08,17;UBERON:0009196,7.40e-08,17;UBERON:0009117,7.40e-08,17;UBERON:0000991,1.22e-07,18;UBERON:0005564,1.22e-07,18;UBERON:0002553,3.76e-07,39|phase1_expression=5.12476310735341,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0.516493293766305,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,2.5236973228659,3.15363197293199,1.69755860719212,2.38121212422995,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,2.43304634926835,0.917733760808408,10.9534788208725,4.57852828398938,7.68901639570651,5.63846707315422,2.93971485413261,5.75010257459886,3.02008690903925,0,0,1.02903774414379,1.14613375975503,3.6097046459421,0.202316460859598,0.528990979272033,0.633831403506179,1.69422266034566,0,6.29929802096979,3.9554654502679,5.6838409195688,8.38880309451533,14.6002956022191,0.103689612308478,0.270011876663381,0.210324961351382,0.856952953211411,1.76694832761291,0,0.191690942036473,0,2.20231761998777,1.53224805702225,1.38245879930619,0.131886287730194,0.0914876436024097,0.52091337055676,1.3959149950069,1.68828783009504,2.44477196442896,0.589257170947335,2.98980529678116,0.186399445825301,1.21161909333094,1.36028808192214,1.44932244350839,0.860423876981386,2.719885334831,2.15881276655127,1.94932925234301,1.34408066129201,1.54488862144927,2.21559419351475,1.55871602761721,1.7666978725517,9.57735254481427,0,2.54805239706646,0,1.08245520505607,1.01343946190039,0,1.48439043634778,0.517875767294343,4.45326417194474,1.21439728736295,2.74018930480927,4.15107895060905,3.16517545160507,5.52666923537813,4.02133092254962,1.97755974187499,3.03658649531814,2.65383165584962,4.52947179852746,1.98757366614354,0.484875253135222,7.45567044872489,1.17112318804619,1.25668024088073,0.510914110417183,0.239630249011841,0,0.254140454146129,2.54644086988199,0.915001205637253,0.125654352112864,0.869121600961382,1.27857728665165,3.94797284663164,1.62241263067758,5.70300437561771,2.86136032403214,2.0217820674694,5.6819301089348,2.47228841629137,1.60931473103431,1.44049703844279,2.86339153887859,2.99360596265843,3.58718416797579,3.46696380870997,5.43277078551933,1.07783996466421,0.378212160335639,2.28736461413134,3.72632745126877,4.17070873838397,4.179025998266,4.7329891373827,1.79130840136644,0,0,0,1.44988040774851,1.64168241986767,2.52086886045421,2.60419209143731,1.96764231747404,2.31400669331067,0.232533944750408,1.87791380979733,2.80236821681207,1.48103864922132,1.97000956894914,2.26992666728396,2.77779976108131,3.29325172936576,4.56301823785264,1.47202963994889,0.514523061896422,0.330418782983798,1.05780226665418,1.06644125267617,1.85789337488351,1.54640953586512,1.4117846723634,2.00140239460383,2.66315876557583,1.42358718463353,2.9645811850322,1.50801125280162,2.38747766449381,3.8992817423824,0.898819408654221,3.02593269824572,1.1948476395262,2.27601481143698,2.05647322697512,1.1270773567308,2.44381593414377,2.32742984601151,3.22624771495465,2.90888070771584,2.06654207171443,2.19798218977925,1.60416313098341,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,1.78238096246994,0.287696137450811,0.972811360650212,0.823684239564244,0,1.86070473834252,0.624075346229121,1.26289438973556,1.79397413521912,0.964887042726734,4.43407656399851,1.32643988239339,1.62964976442026,1.35796068620151,2.34690248288502,2.01007508930179,2.61848004974615,2.53673742215138,5.2019597555043,3.5434350343804,5.58091690301205,3.76885623846197,4.66249451037918,4.05017364028232,0,0,2.45882136509518,3.86311444826625,1.9266070798535,2.57865710502847,3.93443868904021,2.27223834483936,0.631016438832513,1.17131623288992,1.29254038639679,0.477937595905104,0.891194696329576,1.69845918473299,0.404810701674894,0.292255857911312,1.18586333383957,1.92792789853084,4.82596289708113,8.01295216502649,8.30723492703238,7.25868541079156,3.98235415019888,1.94224508923985,1.81394134178851,1.13163047853539,1.47650946440386,3.99665692327106,2.58428293168221,3.27180356529755,3.92147116223193,2.52829406348653,2.10837217149998,1.03135543248187,5.44703369206061,2.16073312837572,1.55230420539305,5.14408884075822,3.01478397191865,6.0645397984704,3.62007845324666,8.52501857520878,1.17335854031855,6.35496212591461,13.0111754852428,1.97863503529776,3.06782410722221,1.74907482291652,1.79058516004705,3.77524069413641,2.04036585640896,2.96680483216816,1.19609616558497,4.33412422722767,2.40752885580625,0.941842285023455,0.410082683163076,0.915112692826091,1.69978429993855,1.39951452323658,2.21119958087078,0.954670618015114,0.949007980743406,1.62655573701479,2.80813886136683,2.50905955217362,3.71216358368502,3.77620169877498,3.96736587481612,2.87931536182433,3.36998930558661,5.59205381778233,0.56369293868419,2.69129782879162,3.80554528051325,6.41688921535357,6.07051170345336,5.06868376472335,9.27122185301456,8.33308063001281,8.703325587334,2.89900944991207,2.88030006257865,0.316011120628178,1.62180172232131,1.23253148597793,0.77952493786677,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.457240839929999,0.302478555410522,0.38983152295901,0.192423683280659,0.467507608726276,3.17422537061296,0,0.0897138566094757,0,9.27310051354514,2.25218970541418,4.94509385521616,2.57242054894879,5.517293144389,1.12950368523413,0.920650473014354,0,1.3748254587495,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,2.71885445390523,1.03552062350364,0.518936737920883,1.59609949360412,1.36586884603307,0.972426868273176,0.209613162627982,0.735374033800057,1.55572709461131,2.26638562962784,0.962757628775446,1.51618327058278,1.2673964994512,1.32038438970253,1.87283014939765,1.79270426733634,1.60819313075717,4.28664322154766,1.73826488917283,2.12200142510076,1.23625770240992,0.588795680537589,2.05721551431249,1.77475806159337,2.38436189947321,1.88950341622027,1.50575008664529,2.03075058940024,0.548783918618318,1.31534855718921,1.90125759384206,1.12228454331548,1.06771516311757,1.47756723563345,0.409231043169689,1.08455788830176,1.73615949883027,2.24829520144151,3.27504251823572,1.50409737833809,2.29545998482612,2.8676884485537,3.47801753430632|short_description=p2@Sdc4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20971
|HGNC=
|TSSclassifier=NA
|UniProt=O35988,Q3U5S6
|association_with_transcript=-108bp_to_NM_011521,uc008nuq.1_5end
|cluster_id=chr2:164268796..164268841,-
|description=CAGE_peak_2_at_Sdc4_5end
|id=chr2:164268796..164268841,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005156!2.31e-09!26;UBERON:0000990!2.31e-09!26;UBERON:0000464!3.15e-08!57;UBERON:0003133!3.66e-08!24;UBERON:0004176!7.99e-08!17;UBERON:0009196!7.99e-08!17;UBERON:0009117!7.99e-08!17;UBERON:0000991!1.32e-07!18;UBERON:0005564!1.32e-07!18;UBERON:0002553!1.60e-07!39;UBERON:0003886!4.46e-07!38;UBERON:0002323!4.62e-07!37;UBERON:0004458!4.62e-07!37
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.82e-09,26;UBERON:0000990,1.82e-09,26;UBERON:0003133,3.12e-08,24;UBERON:0004176,7.40e-08,17;UBERON:0009196,7.40e-08,17;UBERON:0009117,7.40e-08,17;UBERON:0000991,1.22e-07,18;UBERON:0005564,1.22e-07,18;UBERON:0002553,3.76e-07,39
|phase1_expression=5.12476310735341,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0.516493293766305,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,2.5236973228659,3.15363197293199,1.69755860719212,2.38121212422995,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,2.43304634926835,0.917733760808408,10.9534788208725,4.57852828398938,7.68901639570651,5.63846707315422,2.93971485413261,5.75010257459886,3.02008690903925,0,0,1.02903774414379,1.14613375975503,3.6097046459421,0.202316460859598,0.528990979272033,0.633831403506179,1.69422266034566,0,6.29929802096979,3.9554654502679,5.6838409195688,8.38880309451533,14.6002956022191,0.103689612308478,0.270011876663381,0.210324961351382,0.856952953211411,1.76694832761291,0,0.191690942036473,0,2.20231761998777,1.53224805702225,1.38245879930619,0.131886287730194,0.0914876436024097,0.52091337055676,1.3959149950069,1.68828783009504,2.44477196442896,0.589257170947335,2.98980529678116,0.186399445825301,1.21161909333094,1.36028808192214,1.44932244350839,0.860423876981386,2.719885334831,2.15881276655127,1.94932925234301,1.34408066129201,1.54488862144927,2.21559419351475,1.55871602761721,1.7666978725517,9.57735254481427,0,2.54805239706646,0,1.08245520505607,1.01343946190039,0,1.48439043634778,0.517875767294343,4.45326417194474,1.21439728736295,2.74018930480927,4.15107895060905,3.16517545160507,5.52666923537813,4.02133092254962,1.97755974187499,3.03658649531814,2.65383165584962,4.52947179852746,1.98757366614354,0.484875253135222,7.45567044872489,1.17112318804619,1.25668024088073,0.510914110417183,0.239630249011841,0,0.254140454146129,2.54644086988199,0.915001205637253,0.125654352112864,0.869121600961382,1.27857728665165,3.94797284663164,1.62241263067758,5.70300437561771,2.86136032403214,2.0217820674694,5.6819301089348,2.47228841629137,1.60931473103431,1.44049703844279,2.86339153887859,2.99360596265843,3.58718416797579,3.46696380870997,5.43277078551933,1.07783996466421,0.378212160335639,2.28736461413134,3.72632745126877,4.17070873838397,4.179025998266,4.7329891373827,1.79130840136644,0,0,0,1.44988040774851,1.64168241986767,2.52086886045421,2.60419209143731,1.96764231747404,2.31400669331067,0.232533944750408,1.87791380979733,2.80236821681207,1.48103864922132,1.97000956894914,2.26992666728396,2.77779976108131,3.29325172936576,4.56301823785264,1.47202963994889,0.514523061896422,0.330418782983798,1.05780226665418,1.06644125267617,1.85789337488351,1.54640953586512,1.4117846723634,2.00140239460383,2.66315876557583,1.42358718463353,2.9645811850322,1.50801125280162,2.38747766449381,3.8992817423824,0.898819408654221,3.02593269824572,1.1948476395262,2.27601481143698,2.05647322697512,1.1270773567308,2.44381593414377,2.32742984601151,3.22624771495465,2.90888070771584,2.06654207171443,2.19798218977925,1.60416313098341,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,1.78238096246994,0.287696137450811,0.972811360650212,0.823684239564244,0,1.86070473834252,0.624075346229121,1.26289438973556,1.79397413521912,0.964887042726734,4.43407656399851,1.32643988239339,1.62964976442026,1.35796068620151,2.34690248288502,2.01007508930179,2.61848004974615,2.53673742215138,5.2019597555043,3.5434350343804,5.58091690301205,3.76885623846197,4.66249451037918,4.05017364028232,0,0,2.45882136509518,3.86311444826625,1.9266070798535,2.57865710502847,3.93443868904021,2.27223834483936,0.631016438832513,1.17131623288992,1.29254038639679,0.477937595905104,0.891194696329576,1.69845918473299,0.404810701674894,0.292255857911312,1.18586333383957,1.92792789853084,4.82596289708113,8.01295216502649,8.30723492703238,7.25868541079156,3.98235415019888,1.94224508923985,1.81394134178851,1.13163047853539,1.47650946440386,3.99665692327106,2.58428293168221,3.27180356529755,3.92147116223193,2.52829406348653,2.10837217149998,1.03135543248187,5.44703369206061,2.16073312837572,1.55230420539305,5.14408884075822,3.01478397191865,6.0645397984704,3.62007845324666,8.52501857520878,1.17335854031855,6.35496212591461,13.0111754852428,1.97863503529776,3.06782410722221,1.74907482291652,1.79058516004705,3.77524069413641,2.04036585640896,2.96680483216816,1.19609616558497,4.33412422722767,2.40752885580625,0.941842285023455,0.410082683163076,0.915112692826091,1.69978429993855,1.39951452323658,2.21119958087078,0.954670618015114,0.949007980743406,1.62655573701479,2.80813886136683,2.50905955217362,3.71216358368502,3.77620169877498,3.96736587481612,2.87931536182433,3.36998930558661,5.59205381778233,0.56369293868419,2.69129782879162,3.80554528051325,6.41688921535357,6.07051170345336,5.06868376472335,9.27122185301456,8.33308063001281,8.703325587334,2.89900944991207,2.88030006257865,0.316011120628178,1.62180172232131,1.23253148597793,0.77952493786677,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.4572408399299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|short_description=p2@Sdc4
}}

Latest revision as of 03:07, 26 September 2015

Short description:p2@Sdc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sdc4_5end
Coexpression cluster:NA
Association with transcript: -108bp_to_NM_011521, uc008nuq.1_5end
EntrezGene:Sdc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sdc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I34.02
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D24.56
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D52.91
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G36.35
prostate, adult.CNhs10470.859-1F813.01
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B79.27
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D98.70
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
reproductive structure1.82e-0926
reproductive system1.82e-0926
reproductive organ3.12e-0824
external genitalia7.40e-0817
indifferent external genitalia7.40e-0817
indifferent gonad7.40e-0817
gonad1.22e-0718
gonad primordium1.22e-0718
anatomical cavity3.76e-0739
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