FFCP PHASE1:Mm9::chr9:106588223..106588292,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:106588223..106588292,-
|short_description=p1@Tex264
|description=CAGE_peak_1_at_Tex264_5end
|association_with_transcript=0bp_to_ENSMUST00000046735,ENSMUST0...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21767 | |EntrezGene=21767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3536 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q137,Q3TXY2 | |UniProt=E9Q137,Q3TXY2 | ||
|association_with_transcript=0bp_to_ENSMUST00000046735,ENSMUST00000169068,NM_001081654,uc009rkm.1,uc009rkn.1_5end | |||
|cluster_id=chr9:106588223..106588292,- | |||
|description=CAGE_peak_1_at_Tex264_5end | |||
|id=chr9:106588223..106588292,- | |||
|ontology_enrichment_celltype=CL:0000055!6.09e-09!50;CL:0000333!6.23e-07!10;CL:0000095!6.23e-07!10;CL:0000243!6.23e-07!10;CL:0000123!6.23e-07!10;CL:0000125!6.23e-07!10;CL:0000030!6.23e-07!10;CL:0000339!6.23e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,6.23e-07,10;CL:0000095,6.23e-07,10;CL:0000243,6.23e-07,10;CL:0000123,6.23e-07,10;CL:0000125,6.23e-07,10;CL:0000030,6.23e-07,10;CL:0000339,6.23e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.73e-14!102;UBERON:0000924!3.73e-14!102;UBERON:0006601!3.73e-14!102;UBERON:0000073!7.00e-13!75;UBERON:0001016!7.00e-13!75;UBERON:0001017!2.80e-12!73;UBERON:0005743!2.80e-12!73;UBERON:0004111!2.23e-11!122;UBERON:0000025!8.51e-10!114;UBERON:0001049!1.42e-09!52;UBERON:0005068!1.42e-09!52;UBERON:0006241!1.42e-09!52;UBERON:0007135!1.42e-09!52;UBERON:0000955!3.84e-09!50;UBERON:0006238!3.84e-09!50;UBERON:0002346!6.16e-09!71;UBERON:0003075!6.16e-09!71;UBERON:0007284!6.16e-09!71;UBERON:0002616!8.82e-09!49;UBERON:0002020!1.74e-08!34;UBERON:0000033!3.36e-08!63;UBERON:0002791!3.87e-07!29;UBERON:0003528!3.87e-07!29;UBERON:0001893!3.87e-07!29;UBERON:0002619!7.00e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.33e-13,95;UBERON:0000924,6.33e-13,95;UBERON:0006601,6.33e-13,95;UBERON:0001016,7.00e-13,75;UBERON:0001017,2.80e-12,73;UBERON:0004111,2.23e-11,122;UBERON:0000073,3.69e-10,54;UBERON:0000025,8.51e-10,114;UBERON:0001049,1.42e-09,52;UBERON:0005068,1.42e-09,52;UBERON:0006241,1.42e-09,52;UBERON:0007135,1.42e-09,52;UBERON:0002020,1.74e-08,34;UBERON:0000955,2.29e-08,47;UBERON:0006238,2.29e-08,47;UBERON:0010371,2.78e-08,73;UBERON:0002616,5.15e-08,46;UBERON:0002346,6.28e-08,64;UBERON:0003075,6.28e-08,64;UBERON:0007284,6.28e-08,64;UBERON:0010314,6.77e-08,92;UBERON:0003528,3.87e-07,29;UBERON:0002791,3.87e-07,29;UBERON:0001893,3.87e-07,29;UBERON:0002619,7.00e-07,17 | |||
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| ||
|short_description=p1@Tex264 | |||
}} | }} |
Latest revision as of 03:06, 26 September 2015
Short description: | p1@Tex264 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tex264_5end |
Coexpression cluster: | MCL_coexpression_mm9:3536 |
Association with transcript: | 0bp_to_ENSMUST00000046735, ENSMUST00000169068, NM_001081654, uc009rkm.1, uc009rkn.1_5end |
EntrezGene: | Tex264 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 6.23e-07 | 10 |
neuron associated cell | 6.23e-07 | 10 |
glial cell (sensu Vertebrata) | 6.23e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 6.23e-07 | 10 |
glial cell | 6.23e-07 | 10 |
glioblast | 6.23e-07 | 10 |
glioblast (sensu Vertebrata) | 6.23e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.33e-13 | 95 |
ectoderm | 6.33e-13 | 95 |
presumptive ectoderm | 6.33e-13 | 95 |
nervous system | 7.00e-13 | 75 |
central nervous system | 2.80e-12 | 73 |
anatomical conduit | 2.23e-11 | 122 |
regional part of nervous system | 3.69e-10 | 54 |
tube | 8.51e-10 | 114 |
neural tube | 1.42e-09 | 52 |
neural rod | 1.42e-09 | 52 |
future spinal cord | 1.42e-09 | 52 |
neural keel | 1.42e-09 | 52 |
gray matter | 1.74e-08 | 34 |
brain | 2.29e-08 | 47 |
future brain | 2.29e-08 | 47 |
ecto-epithelium | 2.78e-08 | 73 |
regional part of brain | 5.15e-08 | 46 |
neurectoderm | 6.28e-08 | 64 |
neural plate | 6.28e-08 | 64 |
presumptive neural plate | 6.28e-08 | 64 |
structure with developmental contribution from neural crest | 6.77e-08 | 92 |
brain grey matter | 3.87e-07 | 29 |
regional part of telencephalon | 3.87e-07 | 29 |
telencephalon | 3.87e-07 | 29 |
regional part of cerebral cortex | 7.00e-07 | 17 |