FFCP PHASE1:Mm9::chr9:106363021..106363029,+: Difference between revisions
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|id=chr9:106363021..106363029,+
|short_description=p11@Pcbp4
|description=CAGE_peak_11_at_Pcbp4_5end
|association_with_transcript=39bp_to_uc012gzv.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59092 | |EntrezGene=59092 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_uc012gzv.1_5end | |||
|cluster_id=chr9:106363021..106363029,+ | |||
|description=CAGE_peak_11_at_Pcbp4_5end | |||
|id=chr9:106363021..106363029,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.15e-13!44;CL:0000133!2.15e-13!44;CL:0002319!1.80e-12!43;CL:0000540!1.62e-10!33;CL:0000047!1.62e-10!33;CL:0000031!1.62e-10!33;CL:0000404!1.62e-10!33;CL:0000055!8.71e-10!50;CL:0000393!4.13e-08!39;CL:0000211!4.13e-08!39;CL:0000117!4.24e-08!23;CL:0000337!4.24e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,9.50e-23,2;CL:0000129,9.50e-23,2;CL:0002194,4.02e-12,4;CL:0000766,4.02e-12,4;CL:0000234,4.02e-12,4;CL:0000576,4.02e-12,4;CL:0000235,4.02e-12,4;CL:0000864,4.02e-12,4;CL:0002009,4.02e-12,4;CL:0000040,4.02e-12,4;CL:0000559,4.02e-12,4;CL:0000473,1.64e-07,7;CL:0000557,1.64e-07,7;CL:0002453,9.78e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.49e-13!102;UBERON:0000924!6.49e-13!102;UBERON:0006601!6.49e-13!102;UBERON:0000073!3.36e-12!75;UBERON:0001016!3.36e-12!75;UBERON:0001017!4.49e-11!73;UBERON:0005743!4.49e-11!73;UBERON:0000033!1.70e-07!63;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52;UBERON:0002346!2.57e-07!71;UBERON:0003075!2.57e-07!71;UBERON:0007284!2.57e-07!71;UBERON:0002020!3.70e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.15265491596466,0.414758449233911,0.405017814995072,0,0.285650984403804,0,0,0.287536413054709,0,0,0,0,0.263772575460388,0.274462930807229,0.52091337055676,0.837548997004143,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,6.70229461803056,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.511430914660661,0,0,0,0,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.15265491596466,0.414758449233911,0.405017814995072,0,0.285650984403804,0,0,0.287536413054709,0,0,0,0,0.263772575460388,0.274462930807229,0.52091337055676,0.837548997004143,0,0.15279824777681,0,0.142371680799103,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,6.70229461803056,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.511430914660661,0,0,0,0,0,0.210441855886474,0.390361328888111,0,0.180062129805349,0,0,0,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p11@Pcbp4 | |||
}} | }} |
Latest revision as of 02:56, 26 September 2015
Short description: | p11@Pcbp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Pcbp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 39bp_to_uc012gzv.1_5end |
EntrezGene: | Pcbp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 9.50e-23 | 2 |
microglial cell | 9.50e-23 | 2 |
monopoietic cell | 4.02e-12 | 4 |
myeloid leukocyte | 4.02e-12 | 4 |
phagocyte | 4.02e-12 | 4 |
monocyte | 4.02e-12 | 4 |
macrophage | 4.02e-12 | 4 |
tissue-resident macrophage | 4.02e-12 | 4 |
macrophage dendritic cell progenitor | 4.02e-12 | 4 |
monoblast | 4.02e-12 | 4 |
promonocyte | 4.02e-12 | 4 |
defensive cell | 1.64e-07 | 7 |
granulocyte monocyte progenitor cell | 1.64e-07 | 7 |
oligodendrocyte precursor cell | 9.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.12e-12 | 4 |
regional part of metencephalon | 3.12e-12 | 4 |
metencephalon | 3.12e-12 | 4 |
future metencephalon | 3.12e-12 | 4 |
rhombic lip | 3.12e-12 | 4 |
segmental subdivision of hindbrain | 1.29e-08 | 6 |
segmental subdivision of nervous system | 1.29e-08 | 6 |
hindbrain | 1.29e-08 | 6 |
presumptive hindbrain | 1.29e-08 | 6 |