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FFCP PHASE1:Mm9::chr17:26338308..26338332,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:26338308..26338332,-
|DHSsupport=NA
|short_description=p3@Arhgdig
|DPIdataset=NA
|description=CAGE_peak_3_at_Arhgdig_5end
|association_with_transcript=0bp_to_ENSMUST00000121959_5end
|EntrezGene=14570
|EntrezGene=14570
|HGNC=
|HGNC=
|MCL_coexpression_id=85
|TSSclassifier=NA
|UniProt=D3Z6W0
|UniProt=D3Z6W0
|association_with_transcript=0bp_to_ENSMUST00000121959_5end
|cluster_id=chr17:26338308..26338332,-
|description=CAGE_peak_3_at_Arhgdig_5end
|id=chr17:26338308..26338332,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.44e-09!59;UBERON:0001264!2.47e-09!12;UBERON:0003922!2.47e-09!12;UBERON:0002114!2.47e-09!12;UBERON:0003923!2.47e-09!12;UBERON:0003924!2.47e-09!12;UBERON:0003921!2.47e-09!12;UBERON:0002020!8.01e-09!34;UBERON:0001045!6.53e-08!13;UBERON:0001049!1.50e-07!52;UBERON:0005068!1.50e-07!52;UBERON:0006241!1.50e-07!52;UBERON:0007135!1.50e-07!52;UBERON:0002791!2.22e-07!29;UBERON:0003528!2.22e-07!29;UBERON:0001893!2.22e-07!29;UBERON:0002616!4.84e-07!49;UBERON:0002346!5.33e-07!71;UBERON:0003075!5.33e-07!71;UBERON:0007284!5.33e-07!71;UBERON:0003080!5.66e-07!40;UBERON:0000955!7.21e-07!50;UBERON:0006238!7.21e-07!50;UBERON:0002021!7.47e-07!10;UBERON:0000411!7.47e-07!10;UBERON:0001950!7.47e-07!10;UBERON:0000160!8.11e-07!43;UBERON:0002323!8.11e-07!37;UBERON:0004458!8.11e-07!37;UBERON:0000073!9.20e-07!75;UBERON:0001016!9.20e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0001264,3.44e-13,12;UBERON:0000073,2.24e-10,54;UBERON:0002020,6.54e-10,34;UBERON:0002021,1.73e-09,10;UBERON:0000411,1.73e-09,10;UBERON:0001950,1.73e-09,10;UBERON:0001049,3.50e-09,52;UBERON:0005068,3.50e-09,52;UBERON:0006241,3.50e-09,52;UBERON:0007135,3.50e-09,52;UBERON:0002075,5.61e-08,19;UBERON:0001017,6.41e-08,73;UBERON:0003528,7.07e-08,29;UBERON:0002791,7.07e-08,29;UBERON:0001893,7.07e-08,29;UBERON:0002323,7.63e-08,37;UBERON:0004458,7.63e-08,37;UBERON:0003886,1.89e-07,38;UBERON:0001016,2.04e-07,75;UBERON:0003080,2.70e-07,40;UBERON:0002553,4.44e-07,39;UBERON:0002780,6.80e-07,39;UBERON:0001890,6.80e-07,39;UBERON:0006240,6.80e-07,39;UBERON:0002616,7.13e-07,46;UBERON:0002346,7.71e-07,64;UBERON:0003075,7.71e-07,64;UBERON:0007284,7.71e-07,64
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0,0.503637815735669,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0,0,0,0.850432901510698,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0,5.71527606113668,5.53558308826113,0,1.44425809875637,1.49611180822643,2.6542016314108,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.58328969722285,0,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,0.528990979272033,0,0,0.889294796111139,0,0,0,1.19840044207362,2.68952813725088,0.311068836925433,0.540023753326763,0.630974884054146,2.57085885963423,1.32521124570968,0.122490799214954,0.479227355091182,0.919218786610021,4.40463523997555,3.44755812830007,4.76180253094355,1.18697658957174,0.457438218012048,1.56274011167028,5.862842979029,4.50210088025344,3.81995619442025,1.47314292736834,2.27794689278565,1.67759501242771,0.605809546665472,0.604572480854284,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,1.26759077799012,0,0,0,1.73192832808971,1.26679932737549,1.01104889002957,0.5709193985953,0,0.742210695324124,1.04091196059682,0.304465478312141,0.230615497256059,0.753613202763113,1.05829836422134,0.376999773989026,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0,3.0654846625031,0,0,0,2.24685959107234,2.74500361691176,1.00523481690292,3.47648640384553,2.81287003063364,2.0778804455956,2.43361894601636,0.611036183101898,0.124406970610093,0,1.89397670297827,0.130120442962704,0.919608417733892,0.720248519221397,0,0.408218994907967,0.2562274405697,0.749613796477831,1.55222022443409,0,0.567318240503458,0,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0,3.57492912559016,1.02904612379284,2.31293148088659,0.793351699990633,0.213288250535234,0.232236671860439,1.67527699718721,4.03367049246685,1.77902435075896,2.09248188723815,2.84717436926707,1.81168850196412,4.52403375840485,3.78017296878187,2.33956904542944,4.49409704327111,0.648414149624083,0.597423819763102,0,0.799739588268102,0,0,0.969762435838129,0.701358198903186,0.252946148497029,0,0.31399745568275,0.123397163921801,0,1.16791574001266,2.16214894624523,0.449724224769707,0.405720242777006,1.20588579876208,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,2.21703828199926,0.189491411770485,0.325929952884052,1.35796068620151,0.469380496577004,0.837531287209079,0.238043640886014,0.975668239288994,0.315270288212382,0.44292937929755,1.11618338060241,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0.491764273019036,0.275936746304732,2.88991061978026,3.16471553798949,0.327869890753351,0.252470927204373,0,0.780877488593277,0.646270193198397,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.567760340833074,0.534196811001766,0,1.15479086080775,83.6294371541766,2.6705869977048,32.3486205952284,76.3850573011387,100.107341686582,74.3993058024304,48.3260908224574,77.4326843787087,64.8825228660193,68.5799764720721,92.7683755459989,99.0101215182594,1.36175842301515,0.18006109403131,0.517434735131018,1.28602221018955,0.532020700926821,0.713475270408282,0,0,0,0,0.441056796109924,0.49465875882444,0,0.120625849856312,0.477489376012546,0,2.33184669303881,3.33765543618917,0,4.74689796315412,0.740778109478847,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0.138199973804424,4.77335309007557,0.316335993581135,3.86306987541013,4.86024033698106,4.59994251231831,4.80397640241591,8.22672512947406,5.2898211664215,6.54389854960074,0.518459893167171,0.621339313086926,0.56369293868419,3.58839710505549,3.80554528051325,2.33341426012857,4.00395452780966,3.71703476079712,2.93393096614385,1.5624526181274,1.78260885523708,0,0.864090018773596,0,1.21635129174099,0.205421914329655,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.443971906748129,1.16628013592318,0.503653849092235,0.19318959403219,0.187682475451182,0,0.214368379079066,0,2.82375921308533,5.52390283808612,5.72895513439397,5.67115501734169,4.7955776383945,6.7985450765073,4.05013500139084,3.15224842256954,4.07828168085784,6.73088405277366,0.518936737920883,0.399024873401031,0,0.486213434136588,0.838452650511929,2.02227859295016,0.888986911206461,0.824140228955577,1.28367683836726,0.252697211763798,0.760437899670719,0.754505365544305,0.749132059759059,0.832326981263301,0.918967503289812,0.952587382566147,1.15884325944855,0.77163688185482,0.412085900803307,1.03039244094078,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.470546902076653,0.676916863133412,0.73171189149109,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,1.35034627686799,1.49886346762768,0.701794825336225,0.859484216193193,0.57386499620653,0.441182838239031,0.231867835620421
|phase1_expression=2.88267924788629,0.348975407639361,0,0,0,0.503637815735669,0,0,0,0,0,0.0797721589953364,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0,0,0,0.850432901510698,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0,0,0,0,0,5.71527606113668,5.53558308826113,0,1.44425809875637,1.49611180822643,2.6542016314108,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0.58328969722285,0,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,0.528990979272033,0,0,0.889294796111139,0,0,0,1.19840044207362,2.68952813725088,0.311068836925433,0.540023753326763,0.630974884054146,2.57085885963423,1.32521124570968,0.122490799214954,0.479227355091182,0.919218786610021,4.40463523997555,3.44755812830007,4.76180253094355,1.18697658957174,0.457438218012048,1.56274011167028,5.862842979029,4.50210088025344,3.81995619442025,1.47314292736834,2.27794689278565,1.67759501242771,0.605809546665472,0.604572480854284,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,1.26759077799012,0,0,0,1.73192832808971,1.26679932737549,1.01104889002957,0.5709193985953,0,0.742210695324124,1.04091196059682,0.304465478312141,0.230615497256059,0.753613202763113,1.05829836422134,0.376999773989026,0,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0,3.0654846625031,0,0,0,2.24685959107234,2.74500361691176,1.00523481690292,3.47648640384553,2.81287003063364,2.0778804455956,2.43361894601636,0.611036183101898,0.124406970610093,0,1.89397670297827,0.130120442962704,0.919608417733892,0.720248519221397,0,0.408218994907967,0.2562274405697,0.749613796477831,1.55222022443409,0,0.567318240503458,0,0.876782929710299,0.556094498451196,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0,0,3.57492912559016,1.02904612379284,2.31293148088659,0.793351699990633,0.213288250535234,0.232236671860439,1.67527699718721,4.03367049246685,1.77902435075896,2.09248188723815,2.84717436926707,1.81168850196412,4.52403375840485,3.78017296878187,2.33956904542944,4.49409704327111,0.648414149624083,0.597423819763102,0,0.799739588268102,0,0,0.969762435838129,0.701358198903186,0.252946148497029,0,0.31399745568275,0.123397163921801,0,1.16791574001266,2.16214894624523,0.449724224769707,0.405720242777006,1.20588579876208,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,2.21703828199926,0.189491411770485,0.325929952884052,1.35796068620151,0.469380496577004,0.837531287209079,0.238043640886014,0.975668239288994,0.315270288212382,0.44292937929755,1.11618338060241,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0.491764273019036,0.275936746304732,2.88991061978026,3.16471553798949,0.327869890753351,0.252470927204373,0,0.780877488593277,0.646270193198397,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.567760340833074,0.534196811001766,0,1.15479086080775,83.6294371541766,2.6705869977048,32.3486205952284,76.3850573011387,100.107341686582,74.3993058024304,48.3260908224574,77.4326843787087,64.8825228660193,68.5799764720721,92.7683755459989,99.0101215182594,1.36175842301515,0.18006109403131,0.517434735131018,1.28602221018955,0.532020700926821,0.713475270408282,0,0,0,0,0.441056796109924,0.49465875882444,0,0.120625849856312,0.477489376012546,0,2.33184669303881,3.33765543618917,0,4.74689796315412,0.740778109478847,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0.138199973804424,4.77335309007557,0.316335993581135,3.86306987541013,4.86024033698106,4.59994251231831,4.80397640241591,8.22672512947406,5.2898211664215,6.54389854960074,0.518459893167171,0.621339313086926,0.56369293868419,3.58839710505549,3.80554528051325,2.33341426012857,4.00395452780966,3.71703476079712,2.93393096614385,1.5624526181274,1.78260885523708,0,0.864090018773596,0,1.21635129174099,0.205421914329655,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0.443971906748129,1.16628013592318,0.503653849092235,0.19318959403219,0.187682475451182,0,0.214368379079066,0,2.82375921308533,5.52390283808612,5.72895513439397,5.67115501734169,4.7955776383945,6.7985450765073,4.05013500139084,3.15224842256954,4.07828168085784,6.73088405277366,0.518936737920883,0.399024873401031,0,0.486213434136588,0.838452650511929,2.02227859295016,0.888986911206461,0.824140228955577,1.28367683836726,0.252697211763798,0.760437899670719,0.754505365544305,0.749132059759059,0.832326981263301,0.918967503289812,0.952587382566147,1.15884325944855,0.77163688185482,0.412085900803307,1.03039244094078,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.470546902076653,0.676916863133412,0.73171189149109,0.263069711437843,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,1.35034627686799,1.49886346762768,0.701794825336225,0.8594842161931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|short_description=p3@Arhgdig
}}
}}

Latest revision as of 02:51, 26 September 2015

Short description:p3@Arhgdig
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arhgdig_5end
Coexpression cluster:MCL_coexpression_mm9:85
Association with transcript: 0bp_to_ENSMUST00000121959_5end
EntrezGene:Arhgdig
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arhgdig

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E483.63
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F232.35
pancreas, embryo E16.CNhs11003.460-26E576.39
pancreas, embryo E17.CNhs10599.1558-45G3100.11
pancreas, embryo E18.CNhs10580.1535-43I774.40
pancreas, neonate N00.CNhs11105.645-26G948.33
pancreas, neonate N01.CNhs11138.1531-43D777.43
pancreas, neonate N02.CNhs11139.1539-43D864.88
pancreas, neonate N16.CNhs11136.787-43B668.58
pancreas, neonate N25.CNhs11094.1555-45E292.77
pancreas, neonate N30.CNhs11182.1548-44H599.01
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B88.23
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pancreas3.44e-1312
regional part of nervous system2.24e-1054
gray matter6.54e-1034
occipital lobe1.73e-0910
visual cortex1.73e-0910
neocortex1.73e-0910
neural tube3.50e-0952
neural rod3.50e-0952
future spinal cord3.50e-0952
neural keel3.50e-0952
viscus5.61e-0819
central nervous system6.41e-0873
brain grey matter7.07e-0829
regional part of telencephalon7.07e-0829
telencephalon7.07e-0829
body cavity7.63e-0837
body cavity or lining7.63e-0837
body cavity precursor1.89e-0738
nervous system2.04e-0775
anterior neural tube2.70e-0740
anatomical cavity4.44e-0739
regional part of forebrain6.80e-0739
forebrain6.80e-0739
future forebrain6.80e-0739
regional part of brain7.13e-0746
neurectoderm7.71e-0764
neural plate7.71e-0764
presumptive neural plate7.71e-0764
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