FFCP PHASE1:Mm9::chr4:106472342..106472355,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=329910|HGNC=|UniProt=E0CXP8|association_with_transcript=39bp_to_ENSMUST00000145061_5end|description=CAGE_peak_3_at_Acot11_5end|id=chr4:106472342..106472355,-|ontology_enrichment_celltype=CL:0002453!4.40e-07!8|ontology_enrichment_celltype_v019_2=CL:0000128,1.23e-15,6;CL:0000126,1.23e-15,6;CL:0000127,1.23e-15,6;CL:0002453,1.51e-11,8;CL:0000333,4.32e-09,10;CL:0000095,4.32e-09,10;CL:0000243,4.32e-09,10;CL:0000123,4.32e-09,10;CL:0000125,4.32e-09,10;CL:0000030,4.32e-09,10;CL:0000339,4.32e-09,10;CL:0002610,3.36e-08,3;CL:0002605,9.12e-07,2;CL:0002604,9.12e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.86e-11!50;UBERON:0006238!6.86e-11!50;UBERON:0002616!2.66e-10!49;UBERON:0001049!2.69e-09!52;UBERON:0005068!2.69e-09!52;UBERON:0006241!2.69e-09!52;UBERON:0007135!2.69e-09!52;UBERON:0000033!3.08e-09!63;UBERON:0001017!9.83e-09!73;UBERON:0005743!9.83e-09!73;UBERON:0000073!3.78e-08!75;UBERON:0001016!3.78e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.16e-15,6;UBERON:0004732,1.16e-15,6;UBERON:0002028,1.16e-15,6;UBERON:0007277,1.16e-15,6;UBERON:0001017,3.98e-15,73;UBERON:0000073,8.97e-15,54;UBERON:0001016,1.41e-14,75;UBERON:0000955,7.77e-14,47;UBERON:0006238,7.77e-14,47;UBERON:0002616,1.34e-12,46;UBERON:0001049,2.47e-12,52;UBERON:0005068,2.47e-12,52;UBERON:0006241,2.47e-12,52;UBERON:0007135,2.47e-12,52;UBERON:0010314,4.48e-11,92;UBERON:0002037,1.41e-10,4;UBERON:0002680,1.41e-10,4;UBERON:0001895,1.41e-10,4;UBERON:0010092,1.41e-10,4;UBERON:0006215,1.41e-10,4;UBERON:0004121,2.29e-10,95;UBERON:0000924,2.29e-10,95;UBERON:0006601,2.29e-10,95;UBERON:0003076,3.18e-10,12;UBERON:0003057,3.18e-10,12;UBERON:0002346,2.99e-09,64;UBERON:0003075,2.99e-09,64;UBERON:0007284,2.99e-09,64;UBERON:0004684,3.36e-08,3;UBERON:0002275,3.36e-08,3;UBERON:0000025,6.18e-08,114;UBERON:0010371,1.29e-07,73;UBERON:0004111,4.57e-07,122|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,3.2703773457067,3.29529274101708,5.05517737593137,1.53985063787899,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,2.93680877595932,2.30409799884365,0,0,0,0.279182999001381,1.68828783009504,1.5279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,2.76466500925286,0,4.62717942143717,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.46390398505774,1.67557365450764,0.510914110417183,0,0,0,3.74476598512057,2.28750301409313,0,1.56441888173049,2.04572365864264,2.70124457927428,1.94689515681309,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.378212160335639,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.465067889500816,0.804820204198858,1.5179494507732,0.16455984991348,0.656669856316381,1.37816976227955,1.90059983652932,2.19550115291051,3.48936688776967,1.05144974282064,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.590440591918409,0.156998727841375,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.690739927463582,0,0,0,0,0,3.37156238974363,4.45404409050372,0,1.00988370881749,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.532020700926821,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,1.1659233465194,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.187283014939765,0.384150914429216,0.459483751644906,0.952587382566147,0.695305955669133,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.591026894253381,0,0.464810523557898,0,0.249810577937946,0,0.429742108096597,1.53030665655075,0.441182838239031,0.463735671240843|short_description=p3@Acot11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329910 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E0CXP8 | |||
|association_with_transcript=39bp_to_ENSMUST00000145061_5end | |||
|cluster_id=chr4:106472342..106472355,- | |||
|description=CAGE_peak_3_at_Acot11_5end | |||
|id=chr4:106472342..106472355,- | |||
|ontology_enrichment_celltype=CL:0002453!4.40e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.23e-15,6;CL:0000126,1.23e-15,6;CL:0000127,1.23e-15,6;CL:0002453,1.51e-11,8;CL:0000333,4.32e-09,10;CL:0000095,4.32e-09,10;CL:0000243,4.32e-09,10;CL:0000123,4.32e-09,10;CL:0000125,4.32e-09,10;CL:0000030,4.32e-09,10;CL:0000339,4.32e-09,10;CL:0002610,3.36e-08,3;CL:0002605,9.12e-07,2;CL:0002604,9.12e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.86e-11!50;UBERON:0006238!6.86e-11!50;UBERON:0002616!2.66e-10!49;UBERON:0001049!2.69e-09!52;UBERON:0005068!2.69e-09!52;UBERON:0006241!2.69e-09!52;UBERON:0007135!2.69e-09!52;UBERON:0000033!3.08e-09!63;UBERON:0001017!9.83e-09!73;UBERON:0005743!9.83e-09!73;UBERON:0000073!3.78e-08!75;UBERON:0001016!3.78e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.16e-15,6;UBERON:0004732,1.16e-15,6;UBERON:0002028,1.16e-15,6;UBERON:0007277,1.16e-15,6;UBERON:0001017,3.98e-15,73;UBERON:0000073,8.97e-15,54;UBERON:0001016,1.41e-14,75;UBERON:0000955,7.77e-14,47;UBERON:0006238,7.77e-14,47;UBERON:0002616,1.34e-12,46;UBERON:0001049,2.47e-12,52;UBERON:0005068,2.47e-12,52;UBERON:0006241,2.47e-12,52;UBERON:0007135,2.47e-12,52;UBERON:0010314,4.48e-11,92;UBERON:0002037,1.41e-10,4;UBERON:0002680,1.41e-10,4;UBERON:0001895,1.41e-10,4;UBERON:0010092,1.41e-10,4;UBERON:0006215,1.41e-10,4;UBERON:0004121,2.29e-10,95;UBERON:0000924,2.29e-10,95;UBERON:0006601,2.29e-10,95;UBERON:0003076,3.18e-10,12;UBERON:0003057,3.18e-10,12;UBERON:0002346,2.99e-09,64;UBERON:0003075,2.99e-09,64;UBERON:0007284,2.99e-09,64;UBERON:0004684,3.36e-08,3;UBERON:0002275,3.36e-08,3;UBERON:0000025,6.18e-08,114;UBERON:0010371,1.29e-07,73;UBERON:0004111,4.57e-07,122 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,3.2703773457067,3.29529274101708,5.05517737593137,1.53985063787899,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,2.93680877595932,2.30409799884365,0,0,0,0.279182999001381,1.68828783009504,1.5279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,2.76466500925286,0,4.62717942143717,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.46390398505774,1.67557365450764,0.510914110417183,0,0,0,3.74476598512057,2.28750301409313,0,1.56441888173049,2.04572365864264,2.70124457927428,1.94689515681309,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.378212160335639,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0.465067889500816,0.804820204198858,1.5179494507732,0.16455984991348,0.656669856316381,1.37816976227955,1.90059983652932,2.19550115291051,3.48936688776967,1.05144974282064,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.590440591918409,0.156998727841375,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0.690739927463582,0,0,0,0,0,3.37156238974363,4.45404409050372,0,1.00988370881749,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.532020700926821,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,1.1659233465194,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0,0.515559547031063,0.685082519770642,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.187283014939765,0.384150914429216,0.459483751644906,0.952587382566147,0.695305955669133,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0,0.355905054372522,0.591026894253381,0,0.464810523557898,0,0.249810577937946,0,0.429742108096597,1.53030665655075,0.441182838239031,0.463735671240843 | |||
|short_description=p3@Acot11 | |||
}} |
Latest revision as of 02:38, 26 September 2015
Short description: | p3@Acot11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Acot11_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENSMUST00000145061_5end |
EntrezGene: | Acot11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.23e-15 | 6 |
macroglial cell | 1.23e-15 | 6 |
astrocyte | 1.23e-15 | 6 |
oligodendrocyte precursor cell | 1.51e-11 | 8 |
migratory neural crest cell | 4.32e-09 | 10 |
neuron associated cell | 4.32e-09 | 10 |
glial cell (sensu Vertebrata) | 4.32e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 4.32e-09 | 10 |
glial cell | 4.32e-09 | 10 |
glioblast | 4.32e-09 | 10 |
glioblast (sensu Vertebrata) | 4.32e-09 | 10 |
raphe nuclei neuron | 3.36e-08 | 3 |
astrocyte of the cerebral cortex | 9.12e-07 | 2 |
astrocyte of the hippocampus | 9.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 1.16e-15 | 6 |
segmental subdivision of nervous system | 1.16e-15 | 6 |
hindbrain | 1.16e-15 | 6 |
presumptive hindbrain | 1.16e-15 | 6 |
central nervous system | 3.98e-15 | 73 |
regional part of nervous system | 8.97e-15 | 54 |
nervous system | 1.41e-14 | 75 |
brain | 7.77e-14 | 47 |
future brain | 7.77e-14 | 47 |
regional part of brain | 1.34e-12 | 46 |
neural tube | 2.47e-12 | 52 |
neural rod | 2.47e-12 | 52 |
future spinal cord | 2.47e-12 | 52 |
neural keel | 2.47e-12 | 52 |
structure with developmental contribution from neural crest | 4.48e-11 | 92 |
cerebellum | 1.41e-10 | 4 |
regional part of metencephalon | 1.41e-10 | 4 |
metencephalon | 1.41e-10 | 4 |
future metencephalon | 1.41e-10 | 4 |
rhombic lip | 1.41e-10 | 4 |
ectoderm-derived structure | 2.29e-10 | 95 |
ectoderm | 2.29e-10 | 95 |
presumptive ectoderm | 2.29e-10 | 95 |
posterior neural tube | 3.18e-10 | 12 |
chordal neural plate | 3.18e-10 | 12 |
neurectoderm | 2.99e-09 | 64 |
neural plate | 2.99e-09 | 64 |
presumptive neural plate | 2.99e-09 | 64 |
raphe nuclei | 3.36e-08 | 3 |
reticular formation | 3.36e-08 | 3 |
tube | 6.18e-08 | 114 |
ecto-epithelium | 1.29e-07 | 73 |
anatomical conduit | 4.57e-07 | 122 |