FFCP PHASE1:Mm9::chr19:60019485..60019498,-: Difference between revisions
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{{FFCP|EntrezGene=74998|HGNC=|UniProt=G3UW57,Q5HZI0|association_with_transcript=58bp_to_ENSMUST00000171986,NM_001164367,uc008ibm.1_5end|description=CAGE_peak_5_at_Rab11fip2_5end|id=chr19:60019485..60019498,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.35e-10!63;UBERON:0004121!2.02e-09!102;UBERON:0000924!2.02e-09!102;UBERON:0006601!2.02e-09!102;UBERON:0000955!9.14e-09!50;UBERON:0006238!9.14e-09!50;UBERON:0002616!2.72e-08!49;UBERON:0001017!3.43e-08!73;UBERON:0005743!3.43e-08!73;UBERON:0000153!4.92e-08!94;UBERON:0000073!6.63e-08!75;UBERON:0001016!6.63e-08!75;UBERON:0001049!1.60e-07!52;UBERON:0005068!1.60e-07!52;UBERON:0006241!1.60e-07!52;UBERON:0007135!1.60e-07!52;UBERON:0002346!2.70e-07!71;UBERON:0003075!2.70e-07!71;UBERON:0007284!2.70e-07!71;UBERON:0007811!2.92e-07!86;UBERON:0003056!8.34e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.00e-10,95;UBERON:0000924,3.00e-10,95;UBERON:0006601,3.00e-10,95;UBERON:0010371,6.11e-10,73;UBERON:0001017,8.63e-09,73;UBERON:0002346,8.97e-09,64;UBERON:0003075,8.97e-09,64;UBERON:0007284,8.97e-09,64;UBERON:0007023,1.17e-08,51;UBERON:0001016,3.19e-08,75;UBERON:0000073,4.06e-08,54;UBERON:0000955,3.53e-07,47;UBERON:0006238,3.53e-07,47;UBERON:0001049,5.44e-07,52;UBERON:0005068,5.44e-07,52;UBERON:0006241,5.44e-07,52;UBERON:0007135,5.44e-07,52|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.903863264091034,0.563154888606667,0.70219357896598,0,0.239316476986009,1.19840510951844,0.611942816932982,0,0.404950534779652,0,0.157731082679119,0.685572168028694,0.42438965179803,1.78590909317247,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0.523523743973798,0,0,0.485510353031154,0.377690453926732,0.506884656097573,2.20256102594018,0.782391344348039,0.872100625521786,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0.514518872071894,0.85960031981627,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.675029691658453,0.630974884054146,0.571301968807607,0.662605622854841,0.734944795289724,0.479227355091182,0.919218786610021,4.40463523997555,1.91531007127782,2.91852413186863,2.1101806036831,1.00636407962651,1.56274011167028,1.67509799400829,2.8138130501584,1.06958773443767,0.589257170947335,1.56608848879013,1.67759501242771,0.605809546665472,0.529000920747499,0.289864488701678,0,0,0,0,0,1.26399978118577,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0.760079596425296,2.52762222507392,0.5709193985953,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0,0.247194967734374,1.01219549843938,1.76922110389975,0.970601099684455,1.54589062922275,0.969750506270444,0,2.92780797011547,2.51336048176146,0,0.599075622529601,0.599902730993408,0.381210681219194,2.24685959107234,2.74500361691176,0.251308704225729,2.78118912307642,2.55715457330331,2.28566849015516,1.29793010454206,1.73126918545538,1.11966273549084,4.0435641349388,0.631325567659422,1.30120442962704,0.919608417733892,1.0803727788321,0.60281927134286,1.42876648217788,1.7935920839879,1.49922759295566,3.3631438196072,1.07783996466421,1.51284864134255,0.879755620819744,0.876782929710299,1.66828349535359,0.348252166522167,1.02891068203972,1.59227413454795,0,0,0.568326998791185,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0.930135779001631,1.07309360559848,0.934122738937356,0.822799249567402,0.820837320395476,1.05389452409612,1.02339991197733,0.439100230582101,0.402619256281115,1.89260953707715,1.64647379806855,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0,1.33426826306922,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0.189667900953082,1.5994791765362,2.25415471346161,0.814605311381257,1.35766741017338,1.05203729835478,1.13825766823663,1.77132177575523,1.255989822731,0.740382983530803,0.592905254174298,0.333690211432188,0.196558995113203,0,0.608580364165509,0,0,1.15078454980324,0,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,1.29327233116623,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,1.42826184531608,0.585400943573396,1.41871629695572,0.8858587585951,1.59454768657487,1.96635977658886,0.345369963731791,1.88043776155965,0,0,2.45882136509518,2.48343071674259,2.24770825982909,1.64096361229084,0.327869890753351,1.51482556322624,2.83957397474631,0,1.29254038639679,0.238968797952552,1.55959071857676,0.849229592366497,1.21443210502468,2.63030272120181,0.790575555893047,2.57057053137446,2.41298144854057,0.712262414669021,1.62886959353576,3.95928295134085,0,0.728341908464944,0.604647113929502,0.754420319023592,0.295301892880773,0.922305443831782,0.5168565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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74998 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=G3UW57,Q5HZI0 | |||
|association_with_transcript=58bp_to_ENSMUST00000171986,NM_001164367,uc008ibm.1_5end | |||
|cluster_id=chr19:60019485..60019498,- | |||
|description=CAGE_peak_5_at_Rab11fip2_5end | |||
|id=chr19:60019485..60019498,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.35e-10!63;UBERON:0004121!2.02e-09!102;UBERON:0000924!2.02e-09!102;UBERON:0006601!2.02e-09!102;UBERON:0000955!9.14e-09!50;UBERON:0006238!9.14e-09!50;UBERON:0002616!2.72e-08!49;UBERON:0001017!3.43e-08!73;UBERON:0005743!3.43e-08!73;UBERON:0000153!4.92e-08!94;UBERON:0000073!6.63e-08!75;UBERON:0001016!6.63e-08!75;UBERON:0001049!1.60e-07!52;UBERON:0005068!1.60e-07!52;UBERON:0006241!1.60e-07!52;UBERON:0007135!1.60e-07!52;UBERON:0002346!2.70e-07!71;UBERON:0003075!2.70e-07!71;UBERON:0007284!2.70e-07!71;UBERON:0007811!2.92e-07!86;UBERON:0003056!8.34e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.00e-10,95;UBERON:0000924,3.00e-10,95;UBERON:0006601,3.00e-10,95;UBERON:0010371,6.11e-10,73;UBERON:0001017,8.63e-09,73;UBERON:0002346,8.97e-09,64;UBERON:0003075,8.97e-09,64;UBERON:0007284,8.97e-09,64;UBERON:0007023,1.17e-08,51;UBERON:0001016,3.19e-08,75;UBERON:0000073,4.06e-08,54;UBERON:0000955,3.53e-07,47;UBERON:0006238,3.53e-07,47;UBERON:0001049,5.44e-07,52;UBERON:0005068,5.44e-07,52;UBERON:0006241,5.44e-07,52;UBERON:0007135,5.44e-07,52 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.903863264091034,0.563154888606667,0.70219357896598,0,0.239316476986009,1.19840510951844,0.611942816932982,0,0.404950534779652,0,0.157731082679119,0.685572168028694,0.42438965179803,1.78590909317247,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0.523523743973798,0,0,0.485510353031154,0.377690453926732,0.506884656097573,2.20256102594018,0.782391344348039,0.872100625521786,0.219686182734472,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0.514518872071894,0.85960031981627,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.675029691658453,0.630974884054146,0.571301968807607,0.662605622854841,0.734944795289724,0.479227355091182,0.919218786610021,4.40463523997555,1.91531007127782,2.91852413186863,2.1101806036831,1.00636407962651,1.56274011167028,1.67509799400829,2.8138130501584,1.06958773443767,0.589257170947335,1.56608848879013,1.67759501242771,0.605809546665472,0.529000920747499,0.289864488701678,0,0,0,0,0,1.26399978118577,0.170430322578058,0,0.35333957451034,0.845060518660083,0,0,0,0.216491041011214,0.760079596425296,2.52762222507392,0.5709193985953,0.776813650941515,0.742210695324124,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0,0.247194967734374,1.01219549843938,1.76922110389975,0.970601099684455,1.54589062922275,0.969750506270444,0,2.92780797011547,2.51336048176146,0,0.599075622529601,0.599902730993408,0.381210681219194,2.24685959107234,2.74500361691176,0.251308704225729,2.78118912307642,2.55715457330331,2.28566849015516,1.29793010454206,1.73126918545538,1.11966273549084,4.0435641349388,0.631325567659422,1.30120442962704,0.919608417733892,1.0803727788321,0.60281927134286,1.42876648217788,1.7935920839879,1.49922759295566,3.3631438196072,1.07783996466421,1.51284864134255,0.879755620819744,0.876782929710299,1.66828349535359,0.348252166522167,1.02891068203972,1.59227413454795,0,0,0.568326998791185,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0.930135779001631,1.07309360559848,0.934122738937356,0.822799249567402,0.820837320395476,1.05389452409612,1.02339991197733,0.439100230582101,0.402619256281115,1.89260953707715,1.64647379806855,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0,1.33426826306922,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0.189667900953082,1.5994791765362,2.25415471346161,0.814605311381257,1.35766741017338,1.05203729835478,1.13825766823663,1.77132177575523,1.255989822731,0.740382983530803,0.592905254174298,0.333690211432188,0.196558995113203,0,0.608580364165509,0,0,1.15078454980324,0,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,1.29327233116623,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,1.42826184531608,0.585400943573396,1.41871629695572,0.8858587585951,1.59454768657487,1.96635977658886,0.345369963731791,1.88043776155965,0,0,2.45882136509518,2.48343071674259,2.24770825982909,1.64096361229084,0.327869890753351,1.51482556322624,2.83957397474631,0,1.29254038639679,0.238968797952552,1.55959071857676,0.849229592366497,1.21443210502468,2.63030272120181,0.790575555893047,2.57057053137446,2.41298144854057,0.712262414669021,1.62886959353576,3.95928295134085,0,0.728341908464944,0.604647113929502,0.754420319023592,0.295301892880773,0.922305443831782,0.516856586336442,0.727067458955011,0,0.316036757935816,1.05418608574999,0,2.04263763452273,0.900305470156551,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,0,0.469343416127421,0.42366414172764,1.54369878638473,3.62749756471256,1.77610869365496,0.72375509913787,1.19372344003136,0.820704498725306,0,2.41052892613663,0.683483523191411,0.412773735926445,0.370389054739423,0.565105371014073,0.820165366326151,0.915112692826091,0.509935289981566,0.139951452323658,0.690999869022119,0,0.158167996790568,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.539457385539283,0.330613822901344,0.26175594198403,0.518459893167171,0.621339313086926,3.38215763210514,0.897099276263873,0.827292452285488,0.583353565032143,1.16243841129958,1.01373675294467,0.938857909166032,1.5624526181274,0.629156066554265,7.48910774560619,5.76060012515731,1.89606672376907,0.608175645870493,0.924398614483445,0.649604114888975,0.537080087002444,0.993406773906324,0.600977247599844,0.295379054349154,0.605798699688886,0.685861259894999,1.10908803650525,0.682205165178267,0.673482891482306,0.818138315270983,0.906921534460845,0,0.0897138566094757,0.167884616364078,1.54551675225752,2.25218970541418,2.93042598827624,2.14368379079066,1.00314420807073,2.25900737046827,1.38097570952153,2.86447756719698,1.54667864109319,1.37016503954128,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,3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| |||
|short_description=p5@Rab11fip2 | |||
}} |
Latest revision as of 02:13, 26 September 2015
Short description: | p5@Rab11fip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rab11fip2_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENSMUST00000171986, NM_001164367, uc008ibm.1_5end |
EntrezGene: | Rab11fip2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.00e-10 | 95 |
ectoderm | 3.00e-10 | 95 |
presumptive ectoderm | 3.00e-10 | 95 |
ecto-epithelium | 6.11e-10 | 73 |
central nervous system | 8.63e-09 | 73 |
neurectoderm | 8.97e-09 | 64 |
neural plate | 8.97e-09 | 64 |
presumptive neural plate | 8.97e-09 | 64 |
adult organism | 1.17e-08 | 51 |
nervous system | 3.19e-08 | 75 |
regional part of nervous system | 4.06e-08 | 54 |
brain | 3.53e-07 | 47 |
future brain | 3.53e-07 | 47 |
neural tube | 5.44e-07 | 52 |
neural rod | 5.44e-07 | 52 |
future spinal cord | 5.44e-07 | 52 |
neural keel | 5.44e-07 | 52 |