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FFCP PHASE1:Mm9::chr17:25031992..25032022,-: Difference between revisions

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(Created page with "{{FFCP |id=chr17:25031992..25032022,- |short_description=p1@Eme2 |description=CAGE_peak_1_at_Eme2_5end |association_with_transcript=0bp_to_ENSMUST00000119848,ENSMUST000001...")
 
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{{FFCP
{{FFCP
|id=chr17:25031992..25032022,-
|DHSsupport=NA
|short_description=p1@Eme2
|DPIdataset=NA
|description=CAGE_peak_1_at_Eme2_5end
|association_with_transcript=0bp_to_ENSMUST00000119848,ENSMUST00000127293,ENSMUST00000139754,ENSMUST00000140688,ENSMUST00000156659_5end
|EntrezGene=193838
|EntrezGene=193838
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=D3Z6X0,D6RIK4
|UniProt=D3Z6X0,D6RIK4
|association_with_transcript=0bp_to_ENSMUST00000119848,ENSMUST00000127293,ENSMUST00000139754,ENSMUST00000140688,ENSMUST00000156659_5end
|cluster_id=chr17:25031992..25032022,-
|description=CAGE_peak_1_at_Eme2_5end
|id=chr17:25031992..25032022,-
|ontology_enrichment_celltype=CL:0000221!1.24e-09!44;CL:0000133!1.24e-09!44;CL:0002319!1.36e-09!43;CL:0000055!2.67e-09!50;CL:0000540!3.08e-09!33;CL:0000047!3.08e-09!33;CL:0000031!3.08e-09!33;CL:0000404!3.08e-09!33;CL:0000117!1.34e-08!23;CL:0000337!1.34e-08!23;CL:0000393!2.80e-08!39;CL:0000211!2.80e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.24e-09,44;CL:0000133,1.24e-09,44;CL:0002319,1.36e-09,43;CL:0000540,3.08e-09,33;CL:0000047,3.08e-09,33;CL:0000031,3.08e-09,33;CL:0000404,3.08e-09,33;CL:0000117,1.34e-08,23;CL:0000337,1.34e-08,23;CL:0000393,2.80e-08,39;CL:0000211,2.80e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.70e-22!73;UBERON:0005743!8.70e-22!73;UBERON:0000073!3.15e-20!75;UBERON:0001016!3.15e-20!75;UBERON:0004121!2.22e-18!102;UBERON:0000924!2.22e-18!102;UBERON:0006601!2.22e-18!102;UBERON:0002346!5.65e-18!71;UBERON:0003075!5.65e-18!71;UBERON:0007284!5.65e-18!71;UBERON:0000955!9.29e-18!50;UBERON:0006238!9.29e-18!50;UBERON:0002616!1.53e-17!49;UBERON:0001049!3.57e-17!52;UBERON:0005068!3.57e-17!52;UBERON:0006241!3.57e-17!52;UBERON:0007135!3.57e-17!52;UBERON:0000033!6.43e-17!63;UBERON:0003080!2.80e-13!40;UBERON:0003056!5.48e-13!49;UBERON:0002780!8.77e-13!39;UBERON:0001890!8.77e-13!39;UBERON:0006240!8.77e-13!39;UBERON:0002020!3.93e-10!34;UBERON:0007811!5.16e-10!86;UBERON:0002791!2.99e-09!29;UBERON:0003528!2.99e-09!29;UBERON:0001893!2.99e-09!29;UBERON:0000153!8.49e-09!94;UBERON:0000956!1.13e-07!21;UBERON:0001869!1.13e-07!21;UBERON:0000203!1.13e-07!21;UBERON:0004111!1.37e-07!122;UBERON:0000480!6.34e-07!308;UBERON:0000467!6.34e-07!308
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.70e-22,73;UBERON:0001016,3.15e-20,75;UBERON:0000073,1.57e-18,54;UBERON:0004121,2.83e-17,95;UBERON:0000924,2.83e-17,95;UBERON:0006601,2.83e-17,95;UBERON:0001049,3.57e-17,52;UBERON:0005068,3.57e-17,52;UBERON:0006241,3.57e-17,52;UBERON:0007135,3.57e-17,52;UBERON:0002346,3.78e-17,64;UBERON:0003075,3.78e-17,64;UBERON:0007284,3.78e-17,64;UBERON:0000955,7.50e-16,47;UBERON:0006238,7.50e-16,47;UBERON:0010371,1.17e-15,73;UBERON:0002616,1.23e-15,46;UBERON:0003080,2.80e-13,40;UBERON:0003056,5.48e-13,49;UBERON:0002780,8.77e-13,39;UBERON:0001890,8.77e-13,39;UBERON:0006240,8.77e-13,39;UBERON:0010314,3.39e-10,92;UBERON:0002020,3.93e-10,34;UBERON:0003528,2.99e-09,29;UBERON:0002791,2.99e-09,29;UBERON:0001893,2.99e-09,29;UBERON:0011216,6.40e-08,194;UBERON:0000956,1.13e-07,21;UBERON:0001869,1.13e-07,21;UBERON:0000203,1.13e-07,21;UBERON:0004111,1.37e-07,122
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3,11.5892096262304,10.1525020372493,8.78170843260769,8.29777742235475,10.7891477107857,11.9847510801737,13.6113089831695,11.276502676386,8.69875038321696,9.01908701894705,10.0176085849466,10.7548018797113,12.6393272423631,10.3327858782185,9.2925869019928,9.27122185301456,10.2861464026721,6.71099804324549,14.4950472495604,8.92893019399383,7.90027801570446,10.5417111950885,8.21687657318618,8.05509102462329,7.6981479137017,8.34461690081313,10.5771995577573,6.20296014133224,8.98601404538514,8.45895553870498,8.67105192176829,7.89408833991995,10.7757262637169,8.6488907614361,10.4295976462997,6.21560669447381,6.54911153249173,6.88326927092722,12.7505132061246,11.4486310025221,10.2564909589668,10.9327873330324,29.0911820340511,14.6835479080437,14.2700823317225,18.9055519435001,10.3111909406213,14.3867329151835,15.8632718451837,12.8254275044043,15.7612421128477,17.2194115413998,12.9440077937955,6.95375228813984,12.768795948833,12.8050204315601,9.96737539980005,3.5634237646757,6.06683577885047,10.4455962066759,10.3017528619447,10.9112531261217,10.8659801058433,10.6461305953901,10.3744487762342,8.98958471710871,9.98792377515961,9.87890066036548,11.4310485907938,14.3696564171621,9.06673336179414,12.3625770240992,9.42073088860143,6.51451579532289,8.87379030796687,7.86839426826159,8.1393993314104,11.104906889009,10.7460552022429,10.7927503994936,7.89209134313529,10.3211126522855,6.17256498823512,11.7448667942932,11.2295109908142,10.2307760792422,12.0850736125053,7.33045121728337,9.99242311751784,11.6965804222704,12.4625211348013,10.9034349279241,10.1472052794977,9.04284558919644
|phase1_expression=15.3742893220602,21.287499866001,13.6499771816861,13.9133537201142,9.5170188689806,12.0873075776561,10.9797941079897,13.0414556675992,5.77233760821834,8.89445200023575,10.4442960617558,13.4814948702119,7.70403284690426,11.3646523144697,14.9899392817048,9.51633756732182,6.29605690315332,5.67831897644828,3.83920414096069,5.09267582157636,11.8210173309987,5.26242041364692,6.26879493933445,12.4794089778857,11.4704640533585,8.6134794617253,10.3382879078178,12.0663890304098,9.12112413390595,9.32511480111744,10.6430645114546,17.14582818341,15.9916844771988,15.8481681015439,9.24325183204079,8.31173226792462,8.77928231928187,6.27797446105362,2.3440060335714,6.28228492768558,5.29408339227913,8.19654581950135,8.25367600152961,14.8558245211181,16.6258167200004,17.9875817118448,14.0830441982647,12.6454590700659,17.3552084360233,15.5543919259427,9.09911740564856,15.8127820801469,2.01339127269284,5.07753499407941,7.39406358113421,5.91696702882678,6.30373567865265,8.76642556871652,15.1737345644698,12.6957835025288,13.9442908771359,8.80995783379743,12.450127145556,7.19919773825119,7.9109309005358,7.8152812644071,14.3808053048834,13.831858991576,15.3460626216547,15.5256829081444,15.3537221786509,17.1390590642282,15.9025349485162,12.2490799214954,15.7186572469908,19.3035945188104,26.4278114398533,18.5146640223522,19.5080297235429,15.1669230889723,14.9124859071928,9.89735404057844,21.7762739221077,23.6360296213306,20.933359945423,12.6690291753677,11.5321061447273,11.7431650869939,8.78423842664935,6.87701196971748,10.4351215932604,18.0689014166091,2.719885334831,5.39703191637817,12.3457519315057,7.6164570806547,10.8142203501449,10.0553890321054,8.83272415649754,11.3068663843309,12.1125341007945,25.6652954828636,40.7688383530633,14.2213340630666,6.49473123033642,5.57391704045217,6.0662933401774,9.36307813696292,6.73238497482646,14.5473296283528,9.02123699183906,12.4830846107978,13.3756988408514,13.4143150091834,11.2885158850277,16.0853236901985,7.66304399976559,13.5923395504717,10.6153266233985,9.22071044700232,11.2629174414801,8.24287930329878,13.0474232852686,13.1751358655196,18.0124167859571,12.0064815948038,3.35482348616577,2.99951365496704,3.04968544975355,16.6267609739353,11.4375150704657,10.5549655774806,14.7750672163435,13.5529192385075,13.2984348518118,16.8730913590468,9.87841829348068,10.5745925018579,27.5467806692705,12.6265113531884,8.97831056442656,10.3455946995063,10.803727788321,12.9606143338715,12.450679344693,12.4270308676304,14.0552586839593,13.7112786491678,10.993967639575,12.4810012910761,11.2608719464927,9.86380795924087,9.17555922444473,9.05455632957633,10.7006710932131,13.1362616100206,3.51106593656617,5.40430604940902,3.6941254921427,9.32065976409758,7.03578179943289,7.92273070428465,9.2330446878232,8.85439042863317,6.17068451549513,10.4640275137684,8.31647544338819,8.75740067753771,10.6963902443762,10.342550236983,8.35008738322314,8.18719929581861,9.00155472693308,10.6023070820694,19.5569652164638,12.0398396483763,13.2167513193519,15.073682299822,9.17139477301506,10.9151235774406,8.89185483122444,10.4875432804138,12.6755484991576,12.3646656973163,13.7613427847908,12.8465184684728,12.3154252312132,13.7279965708394,15.9870551437679,14.3811105384675,10.8069024937347,11.1519113022446,8.15571974098251,8.11164439529075,11.270773567308,10.1825663922657,7.75809948670503,13.6764848786121,12.2046516649817,15.3514553898786,10.8329122210549,15.3012483263033,16.8977997439675,8.5091003915208,11.2038627214526,9.66907083254871,6.8972441272091,12.0588579876208,9.16653066413111,13.8094145976389,6.80967952455149,9.06052663520669,8.62609239164127,11.9085103253921,12.4815069245824,15.6598904327209,12.19902411949,5.78932225636041,9.42241269849684,10.0430448238357,7.17045896344914,9.33597971763535,9.38760993154008,9.88286918906713,10.9500074807566,14.6350235893349,10.4039195110086,16.3883870340093,10.5240147313941,10.8149787712387,12.0879487306127,11.1379775107764,16.5870412333199,11.9659250440116,11.8023425524569,14.3487108078461,20.2293743384618,20.8636802134122,5.90165803356032,7.32165688892682,12.6203287766503,16.0079885161622,9.90947629570875,14.0991590792006,12.4767257486141,12.7384438854975,9.71545684019746,14.9050487534769,11.4633455604492,13.4954952897159,10.7874464758284,11.5742642383716,11.4020871547503,14.5173708215831,22.5666735177937,11.1679092631291,13.6045600634138,11.3163047853539,18.3087173586079,9.53048958626175,14.9888410037568,9.81541069589265,9.26893183800275,18.962205476149,12.6502330289999,16.5016869197099,19.4050575279659,10.443543453816,16.9459875755408,14.5749183821483,18.2660440651542,18.7287258482174,19.2522354104482,13.0919928119278,9.62154003061212,11.4389318266463,18.9654422327267,13.0260139823769,7.75029248140347,8.08193194037288,8.8335534562321,9.02774948597837,15.1570035047522,17.9862542950194,8.20180227829693,8.2554747185289,7.9633646768976,7.34636982318295,8.47504211870356,6.63456702298916,2.54967644990783,3.91864066506242,3.17859939750175,7.63736494412091,11.2299277721303,11.5892096262304,10.1525020372493,8.78170843260769,8.29777742235475,10.7891477107857,11.9847510801737,13.6113089831695,11.276502676386,8.69875038321696,9.01908701894705,10.0176085849466,10.7548018797113,12.6393272423631,10.3327858782185,9.2925869019928,9.27122185301456,10.2861464026721,6.71099804324549,14.4950472495604,8.92893019399383,7.90027801570446,10.5417111950885,8.21687657318618,8.05509102462329,7.6981479137017,8.34461690081313,10.5771995577573,6.20296014133224,8.98601404538514,8.45895553870498,8.67105192176829,7.89408833991995,10.7757262637169,8.6488907614361,10.4295976462997,6.21560669447381,6.54911153249173,6.88326927092722,12.7505132061246,11.4486310025221,10.2564909589668,10.9327873330324,29.0911820340511,14.6835479080437,14.2700823317225,18.9055519435001,10.3111909406213,14.3867329151835,15.8632718451837,12.8254275044043,15.7612421128477,17.2194115413998,12.9440077937955,6.95375228813984,12.768795948833,12.8050204315601,9.96737539980005,3.5634237646757,6.06683577885047,10.4455962066759,10.3017528619447,10.9112531261217,10.8659801058433,10.6461305953901,10.3744487762342,8.98958471710871,9.98792377515961,9.87890066036548,11.4310485907938,14.3696564171621,9.06673336179414,12.3625770240992,9.42073088860143,6.51451579532289,8.87379030796687,7.86839426826159,8.1393993314104,11.104906889009,10.7460552022429,10.7927503994936,7.89209134313529,10.3211126522855,6.17256498823512,11.7448667942932,11.2295109908142,10.2307760792422,12.0850736125053,7.33045121728337,9.99242311751784,11.6965804222704,12.4625211348013,10.9034349279241,10.1472052794977,9.04284558919644
|short_description=p1@Eme2
}}
}}

Latest revision as of 02:03, 26 September 2015

Short description:p1@Eme2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Eme2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000119848, ENSMUST00000127293, ENSMUST00000139754, ENSMUST00000140688, ENSMUST00000156659_5end
EntrezGene:Eme2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Eme2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I212.07
Ileum epithelium, pool1.CNhs13199.10252-104B99.12
Ileum epithelium, pool2.CNhs13232.10253-104C19.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C315.17
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.81
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D98.78
Mouse Schwann, donor2.CNhs12573.11746-123F96.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.36
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D714.55
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D612.48
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F513.41
adrenal gland, neonate N00.CNhs11191.1311-23C111.29
adrenal gland, neonate N25.CNhs11223.1377-27I316.09
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H113.59
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F59.22
bone (os femoris), neonate N16.CNhs11225.1525-43A611.26
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I218.01
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A416.63
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F110.55
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.57
epididymis, adult.CNhs10490.58-23B227.55
eyeball, adult.CNhs10484.31-12G412.63
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D412.96
eyeball, neonate N00.CNhs11207.633-15C612.45
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G814.06
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E210.99
forelimb, embryo E12.CNhs10600.359-14H212.48
forelimb, embryo E13.CNhs10589.384-1E211.26
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I613.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E99.32
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D49.23
heart, embryo E15.CNhs11017.431-16C88.85
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E38.76
heart, neonate N03.CNhs11221.1349-25I210.70
heart, neonate N10.CNhs11118.749-24G110.34
heart, neonate N16.CNhs11209.782-15G18.35
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D210.60
hippocampus, adult.CNhs10478.13-16E819.56
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D510.92
intestine, embryo E15.CNhs10602.976-16D88.89
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F213.73
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F88.11
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I210.18
kidney, embryo E18.CNhs11001.1288-20C77.76
kidney, neonate N00.CNhs11214.646-21G713.68
kidney, neonate N10.CNhs11206.758-6D512.20
kidney, neonate N20.CNhs11113.832-19I115.35
kidney, neonate N25.CNhs11122.1353-25F310.83
kidney, neonate N30.CNhs11203.1385-42H115.30
liver, adult pregnant day01.CNhs10466.508-5B216.90
liver, embryo E12.CNhs10601.355-15F88.51
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E19.67
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H112.20
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B19.42
lung, embryo E12.CNhs10522.354-16G210.04
lung, embryo E14.CNhs10604.404-26F87.17
lung, embryo E15.CNhs11020.432-17C59.34
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A316.39
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A410.81
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H211.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H214.35
medulla oblongata, adult.CNhs10477.17-12C220.23
medulla oblongata, neonate N30.CNhs11200.1396-42A320.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.10
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I710.79
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F411.17
pancreas, embryo E15.CNhs11042.1556-45F213.60
pancreas, embryo E16.CNhs11003.460-26E511.32
pancreas, embryo E17.CNhs10599.1558-45G318.31
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B618.96
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C716.95
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B918.27
pituitary gland, embryo E16.CNhs11036.449-43F618.73
pituitary gland, embryo E17.CNhs11039.1265-44F519.25
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F818.97
skin, adult.CNhs10492.30-1C313.03
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H38.08
skin, neonate N06.CNhs11097.693-20I58.83
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G28.20
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H18.48
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E311.23
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D410.15
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B810.79
stomach, neonate N07.CNhs11210.718-18A911.98
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I111.28
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F510.02
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I510.33
testis, embryo E18.CNhs11027.503-18G59.29
testis, neonate N00.CNhs11189.1300-22B79.27
testis, neonate N07.CNhs11222.726-26I410.29
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I28.22
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C17.70
thymus, embryo E18.CNhs10595.1273-19G48.34
thymus, neonate N02.CNhs11181.1541-43F810.58
thymus, neonate N03.CNhs11137.2104-43C76.20
thymus, neonate N06.CNhs11197.681-26C48.99
thymus, neonate N07.CNhs11211.713-19D38.46
thymus, neonate N10.CNhs11194.748-24E48.67
thymus, neonate N20.CNhs11186.820-7A27.89
thymus, neonate N25.CNhs11125.1362-25G710.78
thymus, neonate N30.CNhs11132.1393-42G28.65
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E412.75
uterus, adult pregnant day19.CNhs10497.590-15F511.45
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F829.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I86.95
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.09
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C212.46
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B49.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.24e-0944
neurectodermal cell1.24e-0944
neural cell1.36e-0943
neuron3.08e-0933
neuronal stem cell3.08e-0933
neuroblast3.08e-0933
electrically signaling cell3.08e-0933
CNS neuron (sensu Vertebrata)1.34e-0823
neuroblast (sensu Vertebrata)1.34e-0823
electrically responsive cell2.80e-0839
electrically active cell2.80e-0839

Uber anatomy
Ontology termp-valuen
central nervous system8.70e-2273
nervous system3.15e-2075
regional part of nervous system1.57e-1854
ectoderm-derived structure2.83e-1795
ectoderm2.83e-1795
presumptive ectoderm2.83e-1795
neural tube3.57e-1752
neural rod3.57e-1752
future spinal cord3.57e-1752
neural keel3.57e-1752
neurectoderm3.78e-1764
neural plate3.78e-1764
presumptive neural plate3.78e-1764
brain7.50e-1647
future brain7.50e-1647
ecto-epithelium1.17e-1573
regional part of brain1.23e-1546
anterior neural tube2.80e-1340
pre-chordal neural plate5.48e-1349
regional part of forebrain8.77e-1339
forebrain8.77e-1339
future forebrain8.77e-1339
structure with developmental contribution from neural crest3.39e-1092
gray matter3.93e-1034
brain grey matter2.99e-0929
regional part of telencephalon2.99e-0929
telencephalon2.99e-0929
organ system subdivision6.40e-08194
cerebral cortex1.13e-0721
cerebral hemisphere1.13e-0721
pallium1.13e-0721
anatomical conduit1.37e-07122
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