FFCP PHASE1:Mm9::chr2:163264191..163264272,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:163264191..163264272,+ to FFCP PHASE1:Mm9::chr2:163264191..163264272,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=228858 | |EntrezGene=228858 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q3USC7,Q8VE33,A2A5H8 | |UniProt=Q3USC7,Q8VE33,A2A5H8 | ||
|association_with_transcript=0bp_to_ENSMUST00000018087,ENSMUST00000109420,ENSMUST00000109421,ENSMUST00000137070,NM_144891,uc008nst.2,uc008nsu.2,uc012ciq.1_5end | |||
|cluster_id=chr2:163264191..163264272,+ | |||
|description=CAGE_peak_1_at_Gdap1l1_5end | |||
|id=chr2:163264191..163264272,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.46e-18!44;CL:0000133!1.46e-18!44;CL:0002319!1.71e-18!43;CL:0000540!8.62e-18!33;CL:0000047!8.62e-18!33;CL:0000031!8.62e-18!33;CL:0000404!8.62e-18!33;CL:0000117!1.38e-15!23;CL:0000337!1.38e-15!23;CL:0000055!1.22e-13!50;CL:0000393!3.13e-13!39;CL:0000211!3.13e-13!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.57e-20,44;CL:0000133,1.57e-20,44;CL:0002319,1.87e-20,43;CL:0000540,1.14e-19,33;CL:0000047,1.14e-19,33;CL:0000031,1.14e-19,33;CL:0000404,1.14e-19,33;CL:0000117,3.30e-17,23;CL:0000337,3.30e-17,23;CL:0000393,6.69e-14,39;CL:0000211,6.69e-14,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.92e-37!75;UBERON:0001016!5.92e-37!75;UBERON:0001017!6.20e-37!73;UBERON:0005743!6.20e-37!73;UBERON:0004121!1.47e-35!102;UBERON:0000924!1.47e-35!102;UBERON:0006601!1.47e-35!102;UBERON:0002346!5.35e-33!71;UBERON:0003075!5.35e-33!71;UBERON:0007284!5.35e-33!71;UBERON:0001049!1.54e-27!52;UBERON:0005068!1.54e-27!52;UBERON:0006241!1.54e-27!52;UBERON:0007135!1.54e-27!52;UBERON:0000033!6.13e-27!63;UBERON:0000955!6.38e-26!50;UBERON:0006238!6.38e-26!50;UBERON:0002616!2.16e-25!49;UBERON:0003056!1.22e-23!49;UBERON:0003080!3.93e-21!40;UBERON:0002780!1.48e-20!39;UBERON:0001890!1.48e-20!39;UBERON:0006240!1.48e-20!39;UBERON:0002020!5.30e-20!34;UBERON:0002791!1.57e-16!29;UBERON:0003528!1.57e-16!29;UBERON:0001893!1.57e-16!29;UBERON:0007811!4.50e-14!86;UBERON:0000956!1.36e-11!21;UBERON:0001869!1.36e-11!21;UBERON:0000203!1.36e-11!21;UBERON:0000153!1.49e-10!94;UBERON:0002619!1.06e-09!17;UBERON:0002021!3.22e-07!10;UBERON:0000411!3.22e-07!10;UBERON:0001950!3.22e-07!10;UBERON:0003076!6.85e-07!12;UBERON:0003057!6.85e-07!12;UBERON:0000468!9.05e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.50e-41,75;UBERON:0001017,4.74e-41,73;UBERON:0004121,3.59e-37,95;UBERON:0000924,3.59e-37,95;UBERON:0006601,3.59e-37,95;UBERON:0002346,4.25e-35,64;UBERON:0003075,4.25e-35,64;UBERON:0007284,4.25e-35,64;UBERON:0000073,2.42e-32,54;UBERON:0001049,1.49e-30,52;UBERON:0005068,1.49e-30,52;UBERON:0006241,1.49e-30,52;UBERON:0007135,1.49e-30,52;UBERON:0010371,3.44e-30,73;UBERON:0000955,1.85e-26,47;UBERON:0006238,1.85e-26,47;UBERON:0003056,3.35e-26,49;UBERON:0002616,7.03e-26,46;UBERON:0003080,2.12e-23,40;UBERON:0002780,9.31e-23,39;UBERON:0001890,9.31e-23,39;UBERON:0006240,9.31e-23,39;UBERON:0002020,3.87e-22,34;UBERON:0010314,9.93e-22,92;UBERON:0003528,2.90e-18,29;UBERON:0002791,2.90e-18,29;UBERON:0001893,2.90e-18,29;UBERON:0000956,9.43e-13,21;UBERON:0001869,9.43e-13,21;UBERON:0000203,9.43e-13,21;UBERON:0002619,1.21e-10,17;UBERON:0002021,7.09e-08,10;UBERON:0000411,7.09e-08,10;UBERON:0001950,7.09e-08,10;UBERON:0003076,1.64e-07,12;UBERON:0003057,1.64e-07,12;UBERON:0002420,9.31e-07,8;UBERON:0007245,9.31e-07,8;UBERON:0010009,9.31e-07,8;UBERON:0010011,9.31e-07,8;UBERON:0000454,9.31e-07,8 | |||
|phase1_expression=12.9720566154883,0,0,0,0,2.01455126294268,1.86890112476421,0.129123323441576,0,0.234064526321993,0,0.239316476986009,0,0,0,0,0,0.157731082679119,0,0,14.5424026158329,0,0,0.799962113967033,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.550640256485045,1.56478268869608,21.1484401689033,9.22681967484782,8.36048566019419,4.19959264876088,8.62515386189829,0,0,0.336093799142464,0,0.286533439938757,0,144.251636592893,171.393077284139,159.091682280051,2.37191172448392,3.55717918444456,1.7997994345628,1.97773272513395,2.1314403448383,26.3648097256196,42.264013585371,58.9993894035238,76.4133610957369,78.6615355454169,113.40344080831,117.72293232721,91.3781362143557,88.1778333367775,109.387035606592,126.633263149297,100.106873058787,88.6309696888525,163.670883073171,140.616508216904,134.395649603644,112.510748597557,101.860032415734,85.7198170027905,126.984920339151,102.222866813756,129.361215402759,4.31639301999149,7.25486977025141,0.289864488701678,0,0,0.539703191637817,0,0,4.77511028447956,0,0,0,9.57735254481427,0,0,0,0,0.253359865475099,0,2.62622923353838,0,6.38301197978747,18.9099006175088,16.4411358288556,17.5267777914604,15.5244319769201,10.2302175208063,4.14699751387929,0.247194967734374,0.144599356919912,0,0.323533699894818,0.883366073841574,0,1.86391761218122,76.7085688170254,84.8259162594493,0.766371165625774,0.359445373517761,0,0,84.48192062432,69.9975922312499,83.8114528592806,84.4786196134464,83.3632390896878,88.5177069823726,74.4687397481008,1.32391173005411,0.746441823660558,0.505445516867349,6.31325567659422,4.68433594665733,16.5529515192101,21.2473313170312,22.9071323110287,27.6908551545904,24.9821754555457,29.8908501345535,27.6812606690747,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,1.39323986772945,0,0,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,75.2838015859575,72.2390378902577,0.991256348951394,0.793351699990633,4.05247676016945,7.66381017139447,5.67016829817211,3.83198696784351,4.22518283305254,3.80451252225118,0.949058123089023,3.95277491337626,2.26201687920243,5.17286827306992,3.8992817423824,0.898819408654221,0.864552199498777,1.39398891278057,2.0863469104839,2.17072173958485,1.1270773567308,0.814605311381257,0.969762435838129,0.911765658574141,0.442655759869801,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0,2.4633883530163,0.325929952884052,1.01847051465113,0,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0,1.50791283939272,0.54390568381871,2.45882136509518,3.86311444826625,83.0046550236884,76.5392313447087,0.819674726883377,0,22.7165917979705,24.2072021463916,28.8667352961951,5.9742199488138,14.9275111635204,12.7384438854975,21.8597778904443,30.9791209385991,36.7617633490267,73.5825814605938,1.70328102249922,3.02711526234334,2.11753047159649,4.78413356620353,0,14.0812768969889,9.67435382287203,4.52652191414155,7.67784921490009,6.14870295887855,5.94385074286909,5.81653967164009,3.92147116223193,0.316036757935816,1.05418608574999,2.06271086496374,67.40704193925,12.4242154881604,18.3689330971511,27.2208034490122,41.3202744386497,49.5865312933756,56.7694121077317,69.113543449014,0,0,1.98475558249466,0,0.322928853391811,0.120625849856312,0.238744688006273,0,1.45740418314925,61.5612002674892,0,2.27025554759545,1.29636169158798,0,0,0,0,0.279902904647316,0.138199973804424,0,4.9032079005076,8.53941761932765,4.10420295122845,4.59994251231831,3.05707589244649,2.02296519577231,1.81837602595739,0.785267825952089,1.03691978633434,0,0,0.448549638131936,0.496375471371293,0.583353565032143,1.16243841129958,1.18269287843545,1.40828686374905,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0.810900861160657,0.513554785824136,0.389762468933385,0.179026695667481,0.596044064343795,0,0.443068581523732,0.302899349844443,0.228620419965,0.100826185136841,0.38983152295901,0.577271049841977,0.467507608726276,0.226730383615211,0,0,0,2.51146472241848,0.750729901804728,1.46521299413812,0.428736758158132,0,109.561857467711,107.716105342679,98.5380283115762,99.8466989416825,101.392212926055,93.6688432763229,94.5031500324528,81.0578165803597,101.503899612462,93.7146164270794,16.1908262231316,28.3307660114732,24.5856392285953,15.0726164582342,23.89590053959,20.7743164548516,16.4462578573195,13.598313777767,15.7250412699989,11.8767689528985,13.1809235942925,18.1081287730633,13.9525846130125,17.158740844505,15.5075766180156,13.3362233559261,13.2108131577135,14.4681915347779,18.1317796353455,15.8974833745149,20.2292858907395,14.5530161050657,11.921809497366,14.6799880798652,10.9166881281784,14.0460249100183,17.1952294500406,15.5211129748327,16.024885433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| |phase1_expression=12.9720566154883,0,0,0,0,2.01455126294268,1.86890112476421,0.129123323441576,0,0.234064526321993,0,0.239316476986009,0,0,0,0,0,0.157731082679119,0,0,14.5424026158329,0,0,0.799962113967033,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.550640256485045,1.56478268869608,21.1484401689033,9.22681967484782,8.36048566019419,4.19959264876088,8.62515386189829,0,0,0.336093799142464,0,0.286533439938757,0,144.251636592893,171.393077284139,159.091682280051,2.37191172448392,3.55717918444456,1.7997994345628,1.97773272513395,2.1314403448383,26.3648097256196,42.264013585371,58.9993894035238,76.4133610957369,78.6615355454169,113.40344080831,117.72293232721,91.3781362143557,88.1778333367775,109.387035606592,126.633263149297,100.106873058787,88.6309696888525,163.670883073171,140.616508216904,134.395649603644,112.510748597557,101.860032415734,85.7198170027905,126.984920339151,102.222866813756,129.361215402759,4.31639301999149,7.25486977025141,0.289864488701678,0,0,0.539703191637817,0,0,4.77511028447956,0,0,0,9.57735254481427,0,0,0,0,0.253359865475099,0,2.62622923353838,0,6.38301197978747,18.9099006175088,16.4411358288556,17.5267777914604,15.5244319769201,10.2302175208063,4.14699751387929,0.247194967734374,0.144599356919912,0,0.323533699894818,0.883366073841574,0,1.86391761218122,76.7085688170254,84.8259162594493,0.766371165625774,0.359445373517761,0,0,84.48192062432,69.9975922312499,83.8114528592806,84.4786196134464,83.3632390896878,88.5177069823726,74.4687397481008,1.32391173005411,0.746441823660558,0.505445516867349,6.31325567659422,4.68433594665733,16.5529515192101,21.2473313170312,22.9071323110287,27.6908551545904,24.9821754555457,29.8908501345535,27.6812606690747,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,1.39323986772945,0,0,0,0,0.703578179943289,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,75.2838015859575,72.2390378902577,0.991256348951394,0.793351699990633,4.05247676016945,7.66381017139447,5.67016829817211,3.83198696784351,4.22518283305254,3.80451252225118,0.949058123089023,3.95277491337626,2.26201687920243,5.17286827306992,3.8992817423824,0.898819408654221,0.864552199498777,1.39398891278057,2.0863469104839,2.17072173958485,1.1270773567308,0.814605311381257,0.969762435838129,0.911765658574141,0.442655759869801,0,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0,2.4633883530163,0.325929952884052,1.01847051465113,0,0.167506257441816,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0,1.50791283939272,0.54390568381871,2.45882136509518,3.86311444826625,83.0046550236884,76.5392313447087,0.819674726883377,0,22.7165917979705,24.2072021463916,28.8667352961951,5.9742199488138,14.9275111635204,12.7384438854975,21.8597778904443,30.9791209385991,36.7617633490267,73.5825814605938,1.70328102249922,3.02711526234334,2.11753047159649,4.78413356620353,0,14.0812768969889,9.67435382287203,4.52652191414155,7.67784921490009,6.14870295887855,5.94385074286909,5.81653967164009,3.92147116223193,0.316036757935816,1.05418608574999,2.06271086496374,67.40704193925,12.4242154881604,18.3689330971511,27.2208034490122,41.3202744386497,49.5865312933756,56.7694121077317,69.113543449014,0,0,1.98475558249466,0,0.322928853391811,0.120625849856312,0.238744688006273,0,1.45740418314925,61.5612002674892,0,2.27025554759545,1.29636169158798,0,0,0,0,0.279902904647316,0.138199973804424,0,4.9032079005076,8.53941761932765,4.10420295122845,4.59994251231831,3.05707589244649,2.02296519577231,1.81837602595739,0.785267825952089,1.03691978633434,0,0,0.448549638131936,0.496375471371293,0.583353565032143,1.16243841129958,1.18269287843545,1.40828686374905,0.2604087696879,0.209718688851422,0,0.288030006257865,0.316011120628178,0.810900861160657,0.513554785824136,0.389762468933385,0.179026695667481,0.596044064343795,0,0.443068581523732,0.302899349844443,0.228620419965,0.100826185136841,0.38983152295901,0.577271049841977,0.467507608726276,0.226730383615211,0,0,0,2.51146472241848,0.750729901804728,1.46521299413812,0.428736758158132,0,109.561857467711,107.716105342679,98.5380283115762,99.8466989416825,101.392212926055,93.6688432763229,94.5031500324528,81.0578165803597,101.503899612462,93.7146164270794,16.1908262231316,28.3307660114732,24.5856392285953,15.0726164582342,23.89590053959,20.7743164548516,16.4462578573195,13.598313777767,15.7250412699989,11.8767689528985,13.1809235942925,18.1081287730633,13.9525846130125,17.158740844505,15.5075766180156,13.3362233559261,13.2108131577135,14.4681915347779,18.1317796353455,15.8974833745149,20.2292858907395,14.5530161050657,11.921809497366,14.6799880798652,10.9166881281784,14.0460249100183,17.1952294500406,15.5211129748327,16.024885433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| ||
|short_description=p1@Gdap1l1 | |||
}} | }} |
Latest revision as of 02:01, 26 September 2015
Short description: | p1@Gdap1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gdap1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000018087, ENSMUST00000109420, ENSMUST00000109421, ENSMUST00000137070, NM_144891, uc008nst.2, uc008nsu.2, uc012ciq.1_5end |
EntrezGene: | Gdap1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.57e-20 | 44 |
neurectodermal cell | 1.57e-20 | 44 |
neural cell | 1.87e-20 | 43 |
neuron | 1.14e-19 | 33 |
neuronal stem cell | 1.14e-19 | 33 |
neuroblast | 1.14e-19 | 33 |
electrically signaling cell | 1.14e-19 | 33 |
CNS neuron (sensu Vertebrata) | 3.30e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.30e-17 | 23 |
electrically responsive cell | 6.69e-14 | 39 |
electrically active cell | 6.69e-14 | 39 |