FFCP PHASE1:Mm9::chr9:103132592..103132610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22041 | |EntrezGene=22041 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=Q921I1,E9Q939,E9Q2Q7 | |UniProt=Q921I1,E9Q939,E9Q2Q7 | ||
|association_with_transcript=0bp_to_ENSMUST00000112645,ENSMUST00000164377,ENSMUST00000165296_5end | |association_with_transcript=0bp_to_ENSMUST00000112645,ENSMUST00000164377,ENSMUST00000165296_5end | ||
|cluster_id=chr9:103132592..103132610,- | |||
|description=CAGE_peak_1_at_Trf_5end | |description=CAGE_peak_1_at_Trf_5end | ||
|id=chr9:103132592..103132610,- | |id=chr9:103132592..103132610,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!8.90e-15!25;UBERON:0002330!8.90e-15!25;UBERON:0002107!6.14e-14!22;UBERON:0007499!6.14e-14!22;UBERON:0006925!6.14e-14!22;UBERON:0009497!6.14e-14!22;UBERON:0000015!6.14e-14!22;UBERON:0002423!6.14e-14!22;UBERON:0006235!6.14e-14!22;UBERON:0008835!6.14e-14!22;UBERON:0003894!6.14e-14!22;UBERON:0004161!6.14e-14!22;UBERON:0008836!6.14e-14!22;UBERON:0009854!1.82e-13!23;UBERON:0009856!1.82e-13!23;UBERON:0005172!4.17e-10!49;UBERON:0005173!4.17e-10!49;UBERON:0002417!4.17e-10!49;UBERON:0000916!4.17e-10!49;UBERON:0005177!2.75e-09!85;UBERON:0009569!7.33e-09!66;UBERON:0005256!2.33e-07!47 | |ontology_enrichment_uberon=UBERON:0002365!8.90e-15!25;UBERON:0002330!8.90e-15!25;UBERON:0002107!6.14e-14!22;UBERON:0007499!6.14e-14!22;UBERON:0006925!6.14e-14!22;UBERON:0009497!6.14e-14!22;UBERON:0000015!6.14e-14!22;UBERON:0002423!6.14e-14!22;UBERON:0006235!6.14e-14!22;UBERON:0008835!6.14e-14!22;UBERON:0003894!6.14e-14!22;UBERON:0004161!6.14e-14!22;UBERON:0008836!6.14e-14!22;UBERON:0009854!1.82e-13!23;UBERON:0009856!1.82e-13!23;UBERON:0005172!4.17e-10!49;UBERON:0005173!4.17e-10!49;UBERON:0002417!4.17e-10!49;UBERON:0000916!4.17e-10!49;UBERON:0005177!2.75e-09!85;UBERON:0009569!7.33e-09!66;UBERON:0005256!2.33e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.73e-15,25;UBERON:0002330,8.73e-15,25;UBERON:0002107,6.02e-14,22;UBERON:0007499,6.02e-14,22;UBERON:0006925,6.02e-14,22;UBERON:0009497,6.02e-14,22;UBERON:0000015,6.02e-14,22;UBERON:0002423,6.02e-14,22;UBERON:0006235,6.02e-14,22;UBERON:0008835,6.02e-14,22;UBERON:0003894,6.02e-14,22;UBERON:0004161,6.02e-14,22;UBERON:0008836,6.02e-14,22;UBERON:0009854,1.79e-13,23;UBERON:0009856,1.79e-13,23;UBERON:0005172,4.12e-10,49;UBERON:0005173,4.12e-10,49;UBERON:0002417,4.12e-10,49;UBERON:0000916,4.12e-10,49;UBERON:0005177,1.73e-09,79;UBERON:0009569,8.16e-09,66;UBERON:0005256,2.52e-08,45 | |||
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| ||
|short_description=p1@Trf | |short_description=p1@Trf | ||
}} | }} |
Latest revision as of 02:01, 26 September 2015
Short description: | p1@Trf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trf_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000112645, ENSMUST00000164377, ENSMUST00000165296_5end |
EntrezGene: | Trf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 8.73e-15 | 25 |
exocrine system | 8.73e-15 | 25 |
liver | 6.02e-14 | 22 |
epithelial sac | 6.02e-14 | 22 |
digestive gland | 6.02e-14 | 22 |
epithelium of foregut-midgut junction | 6.02e-14 | 22 |
anatomical boundary | 6.02e-14 | 22 |
hepatobiliary system | 6.02e-14 | 22 |
foregut-midgut junction | 6.02e-14 | 22 |
hepatic diverticulum | 6.02e-14 | 22 |
liver primordium | 6.02e-14 | 22 |
septum transversum | 6.02e-14 | 22 |
liver bud | 6.02e-14 | 22 |
digestive tract diverticulum | 1.79e-13 | 23 |
sac | 1.79e-13 | 23 |
abdomen element | 4.12e-10 | 49 |
abdominal segment element | 4.12e-10 | 49 |
abdominal segment of trunk | 4.12e-10 | 49 |
abdomen | 4.12e-10 | 49 |
trunk region element | 1.73e-09 | 79 |
subdivision of trunk | 8.16e-09 | 66 |
trunk mesenchyme | 2.52e-08 | 45 |