FFCP PHASE1:Mm9::chr2:163028808..163028869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269389 | |EntrezGene=269389 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2336 | |||
|TSSclassifier=NA | |||
|UniProt=A2A473 | |UniProt=A2A473 | ||
|association_with_transcript=0bp_to_ENSMUST00000109428_5end | |association_with_transcript=0bp_to_ENSMUST00000109428_5end | ||
|cluster_id=chr2:163028808..163028869,+ | |||
|description=CAGE_peak_1_at_Tox2_5end | |description=CAGE_peak_1_at_Tox2_5end | ||
|id=chr2:163028808..163028869,+ | |id=chr2:163028808..163028869,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.17e-14!33;CL:0000047!1.17e-14!33;CL:0000031!1.17e-14!33;CL:0000404!1.17e-14!33;CL:0002319!3.86e-13!43;CL:0000221!5.33e-13!44;CL:0000133!5.33e-13!44;CL:0000117!3.72e-10!23;CL:0000337!3.72e-10!23;CL:0000393!7.44e-09!39;CL:0000211!7.44e-09!39;CL:0000055!2.37e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.99e-15,33;CL:0000047,3.99e-15,33;CL:0000031,3.99e-15,33;CL:0000404,3.99e-15,33;CL:0002319,8.19e-14,43;CL:0000221,1.16e-13,44;CL:0000133,1.16e-13,44;CL:0000117,1.83e-10,23;CL:0000337,1.83e-10,23;CL:0000393,8.85e-10,39;CL:0000211,8.85e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.19e-22!102;UBERON:0000924!4.19e-22!102;UBERON:0006601!4.19e-22!102;UBERON:0000073!5.50e-20!75;UBERON:0001016!5.50e-20!75;UBERON:0001017!1.18e-19!73;UBERON:0005743!1.18e-19!73;UBERON:0002346!3.82e-19!71;UBERON:0003075!3.82e-19!71;UBERON:0007284!3.82e-19!71;UBERON:0003056!7.18e-15!49;UBERON:0000033!2.14e-13!63;UBERON:0001049!6.82e-11!52;UBERON:0005068!6.82e-11!52;UBERON:0006241!6.82e-11!52;UBERON:0007135!6.82e-11!52;UBERON:0000955!1.67e-10!50;UBERON:0006238!1.67e-10!50;UBERON:0007811!1.74e-10!86;UBERON:0003080!2.31e-10!40;UBERON:0002616!3.15e-10!49;UBERON:0002780!6.57e-10!39;UBERON:0001890!6.57e-10!39;UBERON:0006240!6.57e-10!39;UBERON:0000153!1.14e-09!94;UBERON:0000468!1.39e-07!333;UBERON:0002020!4.07e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.18e-21,75;UBERON:0001017,1.81e-20,73;UBERON:0004121,3.38e-20,95;UBERON:0000924,3.38e-20,95;UBERON:0006601,3.38e-20,95;UBERON:0002346,6.87e-18,64;UBERON:0003075,6.87e-18,64;UBERON:0007284,6.87e-18,64;UBERON:0003056,2.03e-15,49;UBERON:0010314,3.13e-15,92;UBERON:0010371,2.86e-13,73;UBERON:0000073,3.60e-12,54;UBERON:0001049,2.29e-11,52;UBERON:0005068,2.29e-11,52;UBERON:0006241,2.29e-11,52;UBERON:0007135,2.29e-11,52;UBERON:0003080,9.67e-11,40;UBERON:0002780,2.86e-10,39;UBERON:0001890,2.86e-10,39;UBERON:0006240,2.86e-10,39;UBERON:0000955,5.63e-10,47;UBERON:0006238,5.63e-10,47;UBERON:0002616,1.07e-09,46;UBERON:0002020,2.26e-07,34 | |||
|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0,0.233612640595526,2.1950964985068,6.75785866328,3.27690336850791,3.76679530096111,1.91453181588807,1.54080656938085,0.786783621770977,0.999329285446988,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,1.27316895539409,8.50432901510698,0,0,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,14.6057054895715,12.3012957516914,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,8.50298109883741,0.219686182734472,0.194429899074283,2.93971485413261,8.62515386189829,0,7.97898356212479,0.336093799142464,0,0.573066879877513,0,24.0756588422921,19.5726662330652,25.9870875437533,0,0,0.899899717281399,0.988866362566974,0.7104801149461,5.39280198933128,7.68436610643109,4.87341177849845,3.78016627328734,2.73422449756797,4.57041575046086,4.19650227808066,11.0241719293459,16.1978846020819,16.5459381589804,6.60695285996332,5.74593021383345,8.60196586234964,27.8280067110709,27.5377807243253,32.2966289745191,7.53794097303729,23.0732670112989,17.5717984943332,6.77645746589436,5.69486723196412,12.3023634244698,8.02697649331751,2.72057616384428,5.79728977403356,2.58127163094416,1.3599426674155,0,1.29955283489534,0.448026887097336,1.12355536105401,0,0,0,2.67602497575693,0,0,0,0,0.253359865475099,0,2.39786147410026,13.7237078333001,5.93768556259299,6.41895709034703,9.13396434936424,12.9144678463393,7.83757730873637,8.70156432804216,0.753999547978053,1.97755974187499,1.44599356919912,1.76922110389975,0.808834249737046,0.662524555381181,0.484875253135222,0,0.292780797011547,0.41889341362691,2.55457055208591,0.359445373517761,0,0,11.833460512981,4.11750542536764,20.9842768028484,2.08589184230732,3.83573185995496,8.3115217823824,6.48965052271031,1.93494791315601,0.746441823660558,0,2.31486041475121,21.2096322029207,34.4853156650209,38.3532336485394,41.2931200869859,86.8145729170943,54.9607860022006,54.6281054183219,8.53721123438752,0.646703978798527,0.756424320671277,1.23165786914764,2.6303487891309,2.50242524303038,1.39300866608867,2.05782136407943,1.99034266818493,0.702213187313235,0,0.284163499395593,1.65700618028402,1.17263029990548,1.62055855314913,1.89395788468168,4.52557733019029,3.5481435964097,3.0229412817553,3.75582761959467,3.97002164048376,2.13927804887525,2.46251196118643,2.75633952455909,2.19299981137998,1.3173006917463,2.41571553768669,4.20579897128254,8.54108282748061,0.330418782983798,1.58670339998127,2.13288250535234,2.78684006232526,4.12375876230699,1.61346819698674,2.89091456998331,3.23383564391351,0.474529061544512,1.4822905925161,2.76468729680296,3.18330355265841,0,0.898819408654221,0.432276099749388,0.199141273254367,0.569003702859245,0.685491075658373,0,1.4255592949172,0.775809948670503,1.26244475802573,0.505892296994058,0.442830443938806,0.470996183524124,0,0.592905254174298,0.83422552858047,1.17935397067922,0.224862112384854,0.608580364165509,0.72353147925725,0.50925170356284,0.287696137450811,1.78348749452539,0.549122826376163,0,0.744281895337007,0.936113019343682,0.505157755894224,0,0.482443521363367,8.86815312799702,1.13694847062291,3.25929952884052,2.20668611507745,3.05097322775053,3.85264392116176,7.14130922658041,13.2690880543303,5.35959489961049,6.2010113101657,6.53764551495697,9.17634562408133,5.52591941970866,11.4272756279394,0,0,1.47529281905711,0.551873492609465,7.22477654945064,6.68106613575558,0,0.504941854408746,22.4010835785542,23.0358859135017,42.869256148827,11.4705023017225,11.5855310522845,11.889214293131,17.8116708736954,13.151513606009,20.1596766752727,5.78378369559253,23.5620541445726,1.78065603667255,2.93196526836437,1.97964147567043,1.32745138339963,1.45668381692989,0.302323556964751,0.377210159511796,1.47650946440386,2.76691633149535,1.80899805217755,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,18.0432991049508,21.4272701897259,16.9459875755408,8.78781843629528,8.15765074754458,9.63191615051181,10.6956863391379,16.1366423030738,6.8054795338476,8.04961869282517,0.441056796109924,1.15420377059036,0.968786560175433,0.844380948994182,0.238744688006273,0.328281799490123,0.874442509889552,4.45020724825223,2.9048049735635,3.50857675537478,2.77791791054568,3.01389531207506,1.6403307326523,3.20289442489132,0.169978429993855,0.139951452323658,0.276399947608848,0,3.47969592939249,2.64315307264903,1.94409613479242,1.67270636811575,1.74690050996942,1.21377911746339,1.07449492442937,0.785267825952089,2.46268449254406,1.86401793926078,10.1464728963154,3.88743019714345,3.14371131868485,4.4723773319131,1.93739735216597,1.520605129417,4.22486059124714,2.8644964665669,3.14578033277133,7.48910774560619,4.60848010012585,2.52808896502543,2.22997736819181,1.84879722896689,2.85825810551149,3.22248052201467,4.56967115996909,2.40390899039938,2.65841148914239,2.52416124870369,2.13379058634,1.81487133246313,2.82627854145282,2.21287235772758,3.74006086981021,0,8.87943813496259,13.5467923480308,4.19711540910196,5.21611903886914,0.563047426353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|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0,0.233612640595526,2.1950964985068,6.75785866328,3.27690336850791,3.76679530096111,1.91453181588807,1.54080656938085,0.786783621770977,0.999329285446988,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,1.27316895539409,8.50432901510698,0,0,0.47997726838022,0.22940928106717,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,14.6057054895715,12.3012957516914,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,8.50298109883741,0.219686182734472,0.194429899074283,2.93971485413261,8.62515386189829,0,7.97898356212479,0.336093799142464,0,0.573066879877513,0,24.0756588422921,19.5726662330652,25.9870875437533,0,0,0.899899717281399,0.988866362566974,0.7104801149461,5.39280198933128,7.68436610643109,4.87341177849845,3.78016627328734,2.73422449756797,4.57041575046086,4.19650227808066,11.0241719293459,16.1978846020819,16.5459381589804,6.60695285996332,5.74593021383345,8.60196586234964,27.8280067110709,27.5377807243253,32.2966289745191,7.53794097303729,23.0732670112989,17.5717984943332,6.77645746589436,5.69486723196412,12.3023634244698,8.02697649331751,2.72057616384428,5.79728977403356,2.58127163094416,1.3599426674155,0,1.29955283489534,0.448026887097336,1.12355536105401,0,0,0,2.67602497575693,0,0,0,0,0.253359865475099,0,2.39786147410026,13.7237078333001,5.93768556259299,6.41895709034703,9.13396434936424,12.9144678463393,7.83757730873637,8.70156432804216,0.753999547978053,1.97755974187499,1.44599356919912,1.76922110389975,0.808834249737046,0.662524555381181,0.484875253135222,0,0.292780797011547,0.41889341362691,2.55457055208591,0.359445373517761,0,0,11.833460512981,4.11750542536764,20.9842768028484,2.08589184230732,3.83573185995496,8.3115217823824,6.48965052271031,1.93494791315601,0.746441823660558,0,2.31486041475121,21.2096322029207,34.4853156650209,38.3532336485394,41.2931200869859,86.8145729170943,54.9607860022006,54.6281054183219,8.53721123438752,0.646703978798527,0.756424320671277,1.23165786914764,2.6303487891309,2.50242524303038,1.39300866608867,2.05782136407943,1.99034266818493,0.702213187313235,0,0.284163499395593,1.65700618028402,1.17263029990548,1.62055855314913,1.89395788468168,4.52557733019029,3.5481435964097,3.0229412817553,3.75582761959467,3.97002164048376,2.13927804887525,2.46251196118643,2.75633952455909,2.19299981137998,1.3173006917463,2.41571553768669,4.20579897128254,8.54108282748061,0.330418782983798,1.58670339998127,2.13288250535234,2.78684006232526,4.12375876230699,1.61346819698674,2.89091456998331,3.23383564391351,0.474529061544512,1.4822905925161,2.76468729680296,3.18330355265841,0,0.898819408654221,0.432276099749388,0.199141273254367,0.569003702859245,0.685491075658373,0,1.4255592949172,0.775809948670503,1.26244475802573,0.505892296994058,0.442830443938806,0.470996183524124,0,0.592905254174298,0.83422552858047,1.17935397067922,0.224862112384854,0.608580364165509,0.72353147925725,0.50925170356284,0.287696137450811,1.78348749452539,0.549122826376163,0,0.744281895337007,0.936113019343682,0.505157755894224,0,0.482443521363367,8.86815312799702,1.13694847062291,3.25929952884052,2.20668611507745,3.05097322775053,3.85264392116176,7.14130922658041,13.2690880543303,5.35959489961049,6.2010113101657,6.53764551495697,9.17634562408133,5.52591941970866,11.4272756279394,0,0,1.47529281905711,0.551873492609465,7.22477654945064,6.68106613575558,0,0.504941854408746,22.4010835785542,23.0358859135017,42.869256148827,11.4705023017225,11.5855310522845,11.889214293131,17.8116708736954,13.151513606009,20.1596766752727,5.78378369559253,23.5620541445726,1.78065603667255,2.93196526836437,1.97964147567043,1.32745138339963,1.45668381692989,0.302323556964751,0.377210159511796,1.47650946440386,2.76691633149535,1.80899805217755,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,18.0432991049508,21.4272701897259,16.9459875755408,8.78781843629528,8.15765074754458,9.63191615051181,10.6956863391379,16.1366423030738,6.8054795338476,8.04961869282517,0.441056796109924,1.15420377059036,0.968786560175433,0.844380948994182,0.238744688006273,0.328281799490123,0.874442509889552,4.45020724825223,2.9048049735635,3.50857675537478,2.77791791054568,3.01389531207506,1.6403307326523,3.20289442489132,0.169978429993855,0.139951452323658,0.276399947608848,0,3.47969592939249,2.64315307264903,1.94409613479242,1.67270636811575,1.74690050996942,1.21377911746339,1.07449492442937,0.785267825952089,2.46268449254406,1.86401793926078,10.1464728963154,3.88743019714345,3.14371131868485,4.4723773319131,1.93739735216597,1.520605129417,4.22486059124714,2.8644964665669,3.14578033277133,7.48910774560619,4.60848010012585,2.52808896502543,2.22997736819181,1.84879722896689,2.85825810551149,3.22248052201467,4.56967115996909,2.40390899039938,2.65841148914239,2.52416124870369,2.13379058634,1.81487133246313,2.82627854145282,2.21287235772758,3.74006086981021,0,8.87943813496259,13.5467923480308,4.19711540910196,5.21611903886914,0.563047426353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| ||
|short_description=p1@Tox2 | |short_description=p1@Tox2 | ||
}} | }} |
Latest revision as of 01:49, 26 September 2015
Short description: | p1@Tox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2336 |
Association with transcript: | 0bp_to_ENSMUST00000109428_5end |
EntrezGene: | Tox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.99e-15 | 33 |
neuronal stem cell | 3.99e-15 | 33 |
neuroblast | 3.99e-15 | 33 |
electrically signaling cell | 3.99e-15 | 33 |
neural cell | 8.19e-14 | 43 |
ectodermal cell | 1.16e-13 | 44 |
neurectodermal cell | 1.16e-13 | 44 |
CNS neuron (sensu Vertebrata) | 1.83e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-10 | 23 |
electrically responsive cell | 8.85e-10 | 39 |
electrically active cell | 8.85e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.18e-21 | 75 |
central nervous system | 1.81e-20 | 73 |
ectoderm-derived structure | 3.38e-20 | 95 |
ectoderm | 3.38e-20 | 95 |
presumptive ectoderm | 3.38e-20 | 95 |
neurectoderm | 6.87e-18 | 64 |
neural plate | 6.87e-18 | 64 |
presumptive neural plate | 6.87e-18 | 64 |
pre-chordal neural plate | 2.03e-15 | 49 |
structure with developmental contribution from neural crest | 3.13e-15 | 92 |
ecto-epithelium | 2.86e-13 | 73 |
regional part of nervous system | 3.60e-12 | 54 |
neural tube | 2.29e-11 | 52 |
neural rod | 2.29e-11 | 52 |
future spinal cord | 2.29e-11 | 52 |
neural keel | 2.29e-11 | 52 |
anterior neural tube | 9.67e-11 | 40 |
regional part of forebrain | 2.86e-10 | 39 |
forebrain | 2.86e-10 | 39 |
future forebrain | 2.86e-10 | 39 |
brain | 5.63e-10 | 47 |
future brain | 5.63e-10 | 47 |
regional part of brain | 1.07e-09 | 46 |
gray matter | 2.26e-07 | 34 |