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FFCP PHASE1:Mm9::chr17:24769553..24769577,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22084
|EntrezGene=22084
|HGNC=
|HGNC=
|MCL_coexpression_id=311
|TSSclassifier=NA
|UniProt=E9QMW6,Q7TT21,E9QLU3,E9QN11,E9QN07,E9QMZ9,E9QMZ6,E9PY87,Q3UGI8
|UniProt=E9QMW6,Q7TT21,E9QLU3,E9QN11,E9QN07,E9QMZ9,E9QMZ6,E9PY87,Q3UGI8
|association_with_transcript=0bp_to_ENSMUST00000088420,ENSMUST00000097373,ENSMUST00000097374,ENSMUST00000115290,ENSMUST00000115291,ENSMUST00000115292,ENSMUST00000115294,ENSMUST00000163283,NM_001039363,NM_011647,uc008awz.1,uc008axa.1,uc008axb.1,uc008axc.1,uc008axd.1,uc008axe.1,uc008axg.1,uc008axh.1_5end
|association_with_transcript=0bp_to_ENSMUST00000088420,ENSMUST00000097373,ENSMUST00000097374,ENSMUST00000115290,ENSMUST00000115291,ENSMUST00000115292,ENSMUST00000115294,ENSMUST00000163283,NM_001039363,NM_011647,uc008awz.1,uc008axa.1,uc008axb.1,uc008axc.1,uc008axd.1,uc008axe.1,uc008axg.1,uc008axh.1_5end
|cluster_id=chr17:24769553..24769577,-
|description=CAGE_peak_1_at_Tsc2_5end
|description=CAGE_peak_1_at_Tsc2_5end
|id=chr17:24769553..24769577,-
|id=chr17:24769553..24769577,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!2.84e-17!122;UBERON:0000025!9.41e-16!114;UBERON:0000033!2.31e-15!63;UBERON:0001049!1.10e-14!52;UBERON:0005068!1.10e-14!52;UBERON:0006241!1.10e-14!52;UBERON:0007135!1.10e-14!52;UBERON:0000955!2.18e-14!50;UBERON:0006238!2.18e-14!50;UBERON:0002616!9.70e-14!49;UBERON:0003056!2.94e-13!49;UBERON:0002346!7.80e-13!71;UBERON:0003075!7.80e-13!71;UBERON:0007284!7.80e-13!71;UBERON:0003080!3.41e-12!40;UBERON:0002780!1.27e-11!39;UBERON:0001890!1.27e-11!39;UBERON:0006240!1.27e-11!39;UBERON:0000468!6.27e-11!333;UBERON:0004121!3.52e-09!102;UBERON:0000924!3.52e-09!102;UBERON:0006601!3.52e-09!102;UBERON:0001017!7.58e-09!73;UBERON:0005743!7.58e-09!73;UBERON:0002791!9.19e-09!29;UBERON:0003528!9.19e-09!29;UBERON:0001893!9.19e-09!29;UBERON:0002020!1.92e-08!34;UBERON:0000073!6.02e-08!75;UBERON:0001016!6.02e-08!75;UBERON:0000922!1.24e-07!328;UBERON:0000956!2.44e-07!21;UBERON:0001869!2.44e-07!21;UBERON:0000203!2.44e-07!21;UBERON:0000477!4.39e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.84e-17,122;UBERON:0000025,9.41e-16,114;UBERON:0010314,1.79e-15,92;UBERON:0000955,3.54e-15,47;UBERON:0006238,3.54e-15,47;UBERON:0001049,1.10e-14,52;UBERON:0005068,1.10e-14,52;UBERON:0006241,1.10e-14,52;UBERON:0007135,1.10e-14,52;UBERON:0002616,1.65e-14,46;UBERON:0002346,8.93e-14,64;UBERON:0003075,8.93e-14,64;UBERON:0007284,8.93e-14,64;UBERON:0000073,1.76e-13,54;UBERON:0003056,2.94e-13,49;UBERON:0010371,2.98e-12,73;UBERON:0003080,3.41e-12,40;UBERON:0002780,1.27e-11,39;UBERON:0001890,1.27e-11,39;UBERON:0006240,1.27e-11,39;UBERON:0004121,1.55e-09,95;UBERON:0000924,1.55e-09,95;UBERON:0006601,1.55e-09,95;UBERON:0001017,7.58e-09,73;UBERON:0003528,9.19e-09,29;UBERON:0002791,9.19e-09,29;UBERON:0001893,9.19e-09,29;UBERON:0002020,1.92e-08,34;UBERON:0001016,6.02e-08,75;UBERON:0000956,2.44e-07,21;UBERON:0001869,2.44e-07,21;UBERON:0000203,2.44e-07,21
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7,13.381650944926,14.4119292072477,16.5883146053329,19.5062155511793,21.7257431846745,15.8130267415987,28.5816084019986,21.9840246086834,19.2876344396733,15.0567226315959,18.6673140810286,16.9199368755828,15.5439635451516,17.6035857968631,20.5722928053441,17.3017918302423,7.9722759872582,17.5698303817298,14.8525226695244,17.231643299664,14.276823045911,11.0432699531126,11.8157619140538,12.715606706001,12.3801313005568,11.3720935924424,12.317906893674,13.031363938005,10.4859232542314,10.8178247621125,12.2189038883218,12.0383209247016,32.8759056242057,4.88369097422942,9.15081337416652,11.7519231454855,22.6031825017663,20.8327547750812,22.3444981606063,17.1494703263253,26.0817494098389,23.1548255472997,31.302116082488,28.6447756719698,20.7942350635862,21.9226406326606,35.5035131773159,30.3760125104313,27.0192721934532,23.1102628581944,23.8169743405837,15.4643147900423,16.3600198094423,17.5855613926758,19.6916440825318,14.6729213839588,17.8328203196514,18.2242316797324,19.1612603232172,14.7622836412235,17.6888048234658,17.7435509923168,18.2967551144494,14.7017166727715,18.8874199594364,20.2172850723759,13.8125170472091,22.9450965370814,17.3618298417335,18.5438655361488,19.7246552980092,17.8292011240416,14.730491911225,17.1674056762071,13.2265239135419,15.3398290076989,15.4844732441768,17.1952294500406,17.6256706663355,18.4693594830372,20.2011217796786,21.7102083167239,20.2919233693661,12.2769312950907,18.127610418758,17.9403148212461,31.7259433981191,23.8610240614317,20.19787908054,20.8504281955039,23.6032818457882,17.8538233427725
|phase1_expression=12.3314612270691,8.02643437570531,5.45999087267443,18.4503168897166,14.5259761684441,7.55456723603504,7.70921713965235,6.45616617207881,1.97104211012333,2.34064526321993,5.82141091966717,5.18519033469687,7.87523357683546,6.90621179110079,9.99329285446988,7.89653542820321,11.8925519281785,9.30613387806801,11.2433835556706,9.76096199135469,14.4573593256819,12.5106598513115,7.83599367416806,7.35965144849671,5.27641346454491,7.46501553349526,7.75371593086335,4.52489588640367,7.9809836171677,8.06496415231778,4.21287970245079,10.7955214488137,15.9916844771988,0,8.66554859253824,5.65197794218874,10.0042984568561,10.4632907684227,5.4693474116666,10.470474879476,14.1175557127443,12.294818729252,13.1087795318411,6.6725313527056,10.1376931219515,11.1963518818626,19.559783608701,18.3141131359575,14.2796018777407,18.8597002102055,14.8385606922884,20.125359011096,7.71799987865587,5.80289713609076,7.73015738027667,7.46052364504246,10.0286703978565,8.25075347643908,26.7057728334669,17.4567023159771,20.9164363157039,17.958760199664,16.0073063300005,9.89889689009539,8.89979726310277,7.8152812644071,9.28760342607055,14.2160772968975,22.1895770340142,17.2807601064564,19.3498964443271,19.1386159550548,16.3442720304194,18.2511290830282,23.2904494574314,22.9804696652505,12.1127469099328,19.5361627270337,17.050325191443,25.7178261073878,25.2505896342651,25.0038417867245,18.4260779340911,10.1297269805702,17.72459674211,14.142172102736,17.7964600998879,24.0455285114638,9.08714319998209,9.8998743739889,17.971598299504,18.0689014166091,12.9194553404473,9.17495425784289,29.8897152025928,23.7454250161588,11.3759980306719,9.54409806437123,5.45550609666024,6.71345191569646,8.73229202615419,14.115912515575,15.2883143823987,0,9.52560580449342,4.56047757855178,7.07734223020697,8.22123933977232,15.018397251536,23.4538579722423,12.6644288539279,11.8741536541735,16.1430848079241,12.8114244469729,18.6966044345771,20.4836543867371,16.5620628382031,37.1620347284173,15.9229899350977,20.7061567932684,20.759102735277,13.5765070877862,14.9113408974498,32.2058876712702,28.065858713003,19.9256503062701,5.03223522924865,4.19931911695385,3.81210681219194,31.4560342750128,30.652540388848,34.0523294225863,35.807809959609,30.4301394223093,28.0513860155406,28.7167035629931,19.5531578592607,17.0437549735827,20.7232661915613,26.0947901299228,14.7036100547855,13.5642241615749,21.9675798362526,16.8789395976001,23.6767017046621,20.498195245576,25.9553777030449,25.3529303324235,18.7544153851573,20.6125627382923,20.762232651346,15.7820927347854,13.9023624612799,19.8503734917635,15.8452245034116,17.7140497468459,3.51106593656617,6.94839349209731,6.81992398549422,19.8840741634082,19.2311369184499,20.3470129450947,23.674473558521,17.9055450890137,17.8949850949359,20.4629871380359,27.6321603441608,25.6883753207773,28.4688540350321,21.9984401865988,33.8867623901677,32.1639972335731,34.0302678701129,43.4828796783605,39.74480027862,32.5178575118539,25.7726650727362,10.0491215332147,12.797295032114,16.4888037020911,14.1754207454303,18.7565677899709,16.6783532883653,15.5985013412299,15.1849299694244,15.317002789333,14.0747716928151,15.5186048192098,21.056121408865,19.7740269903929,17.2910439899755,17.1261494998756,11.3800740571849,15.5377977149231,19.1603150644237,13.6446389656361,16.6799138964158,23.1448205638051,23.0813360503539,22.5843526408791,23.0788129926821,27.2707732267179,18.6765155064904,14.5155241973002,13.9556886530374,13.9414509678609,12.9830477688642,15.1941610644023,11.7127891819453,15.247895284893,8.59316701907687,14.0026320725922,11.5014565221884,16.0020607497456,16.8500343481863,24.752730038817,17.5809465251474,27.9817242390753,23.2789019609922,13.8328730592454,17.7631824321808,16.4652733201932,15.7242466353296,20.2682571504597,23.8043640886014,23.8063050386515,20.8078390220172,20.5962161373361,26.3100368284854,15.5670148979951,22.7944176062982,22.8545512558788,10.5553898757491,9.24639662491806,15.7364567366092,20.4193192265502,30.9862638676438,31.178308633526,11.3115112309906,32.5687496093641,7.88770548540642,11.7131623288992,9.47862950024315,10.7535959078648,11.5855310522845,10.4738316391868,13.3587531552715,8.47541987942804,10.2774822266096,42.0930924512567,20.8651925256155,21.5459380437379,22.6412873501471,21.7760562323747,25.2215762845929,13.110154352369,19.9533547596736,17.3516673375426,23.6241514304618,22.7502009478506,20.4158351602895,14.9048829085777,14.9728898921583,12.009396801561,21.0837217149998,23.721174947083,25.8734100372879,15.8453762747553,20.9561067728062,22.7197257133488,23.4089108407801,18.9070946658195,22.3786668018885,28.9241701658869,13.1416156515678,14.8282449604674,37.9308844654535,17.9726015706213,15.1776561094151,17.430435304237,17.3089898804548,17.8913580722117,16.6144076879015,28.5554965096185,12.6444451790411,18.3684312487268,14.2599786074678,11.1137389632768,11.6190093562871,12.8115776995653,8.15896463970505,7.69732987780119,9.12119827109197,16.2294005062569,17.0821436533813,17.8921131071627,11.5565714679327,13.381650944926,14.4119292072477,16.5883146053329,19.5062155511793,21.7257431846745,15.8130267415987,28.5816084019986,21.9840246086834,19.2876344396733,15.0567226315959,18.6673140810286,16.9199368755828,15.5439635451516,17.6035857968631,20.5722928053441,17.3017918302423,7.9722759872582,17.5698303817298,14.8525226695244,17.231643299664,14.276823045911,11.0432699531126,11.8157619140538,12.715606706001,12.3801313005568,11.3720935924424,12.317906893674,13.031363938005,10.4859232542314,10.8178247621125,12.2189038883218,12.0383209247016,32.8759056242057,4.88369097422942,9.15081337416652,11.7519231454855,22.6031825017663,20.8327547750812,22.3444981606063,17.1494703263253,26.0817494098389,23.1548255472997,31.302116082488,28.6447756719698,20.7942350635862,21.9226406326606,35.5035131773159,30.3760125104313,27.0192721934532,23.1102628581944,23.8169743405837,15.4643147900423,16.3600198094423,17.5855613926758,19.6916440825318,14.6729213839588,17.8328203196514,18.2242316797324,19.1612603232172,14.7622836412235,17.6888048234658,17.7435509923168,18.2967551144494,14.7017166727715,18.8874199594364,20.2172850723759,13.8125170472091,22.9450965370814,17.3618298417335,18.5438655361488,19.7246552980092,17.8292011240416,14.730491911225,17.1674056762071,13.2265239135419,15.3398290076989,15.4844732441768,17.1952294500406,17.6256706663355,18.4693594830372,20.2011217796786,21.7102083167239,20.2919233693661,12.2769312950907,18.127610418758,17.9403148212461,31.7259433981191,23.8610240614317,20.19787908054,20.8504281955039,23.6032818457882,17.8538233427725
|short_description=p1@Tsc2
|short_description=p1@Tsc2
}}
}}

Latest revision as of 01:40, 26 September 2015

Short description:p1@Tsc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tsc2_5end
Coexpression cluster:MCL_coexpression_mm9:311
Association with transcript: 0bp_to_ENSMUST00000088420, ENSMUST00000097373, ENSMUST00000097374, ENSMUST00000115290, ENSMUST00000115291, ENSMUST00000115292, ENSMUST00000115294, ENSMUST00000163283, NM_001039363, NM_011647, uc008awz.1, uc008axa.1, uc008axb.1, uc008axc.1, uc008axd.1, uc008axe.1, uc008axg.1, uc008axh.1_5end
EntrezGene:Tsc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tsc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.45
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C326.71
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.96
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.28
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.05
Mouse Schwann, donor1.CNhs12507.11728-123D99.09
Mouse Schwann, donor2.CNhs12573.11746-123F99.90
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H915.02
adrenal gland, adult.CNhs10508.49-24D723.45
adrenal gland, embryo E14.CNhs11038.406-44C512.66
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I116.14
adrenal gland, embryo E18.CNhs11026.1262-18F512.81
adrenal gland, neonate N00.CNhs11191.1311-23C118.70
adrenal gland, neonate N25.CNhs11223.1377-27I320.48
amnion, adult pregnant day17.5.CNhs10488.583-22A816.56
aorta, adult.CNhs10498.46-23H137.16
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F520.71
bone (os femoris), neonate N16.CNhs11225.1525-43A620.76
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I228.07
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A431.46
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F134.05
cortex, adult.CNhs10473.12-14D535.81
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F228.05
diencephalon, neonate N30.CNhs11201.1388-42B228.72
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.04
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G426.09
eyeball, embryo E12.CNhs11016.345-16C614.70
eyeball, embryo E14.CNhs10521.399-16E213.56
eyeball, embryo E15.CNhs10593.426-16C921.97
eyeball, embryo E17.CNhs11023.1261-18D416.88
eyeball, neonate N00.CNhs11207.633-15C623.68
eyeball, neonate N01.CNhs11140.1532-43E720.50
eyeball, neonate N02.CNhs11205.1551-44G825.96
eyeball, neonate N16.CNhs11188.777-19A225.35
forelimb, embryo E11.CNhs10596.335-25E218.75
forelimb, embryo E12.CNhs10600.359-14H220.61
forelimb, embryo E13.CNhs10589.384-1E220.76
forelimb, embryo E14.CNhs10577.413-26A815.78
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C419.85
forelimb, embryo E18.CNhs11008.1520-43B515.85
gonad, embryo E13.CNhs11044.1564-45I617.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E919.88
heart, embryo E12.CNhs11015.353-12F519.23
heart, embryo E13.CNhs11013.376-3I920.35
heart, embryo E14.CNhs10597.403-26D423.67
heart, embryo E15.CNhs11017.431-16C817.91
heart, embryo E16.CNhs11021.457-17C617.89
heart, embryo E17.CNhs11025.479-18E520.46
heart, embryo E18.CNhs11030.1283-20G327.63
heart, neonate N00.CNhs11213.639-21E325.69
heart, neonate N03.CNhs11221.1349-25I228.47
heart, neonate N10.CNhs11118.749-24G122.00
heart, neonate N16.CNhs11209.782-15G133.89
heart, neonate N20.CNhs11127.821-26I632.16
heart, neonate N25.CNhs11196.1351-25D334.03
heart, neonate N30.CNhs11202.1390-42D243.48
hippocampus, adult.CNhs10478.13-16E839.74
hippocampus, neonate N00.CNhs11228.627-43G132.52
intestinal mucosa, adult.CNhs10506.860-29I325.77
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I512.80
intestine, embryo E13.CNhs11010.381-16D516.49
intestine, embryo E15.CNhs10602.976-16D814.18
intestine, embryo E16.CNhs10585.463-22H418.76
intestine, embryo E17.CNhs10582.482-18D316.68
intestine, embryo E18.CNhs10526.1289-20F715.60
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E915.32
intestine, neonate N06.CNhs11102.688-20B814.07
intestine, neonate N07.CNhs11095.720-20F215.52
intestine, neonate N10.CNhs11098.755-23A521.06
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E317.29
intestine, neonate N30.CNhs11131.1384-42G117.13
kidney, embryo E14.CNhs10606.411-4I911.38
kidney, embryo E15.CNhs10997.434-16F815.54
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I213.64
kidney, embryo E18.CNhs11001.1288-20C716.68
kidney, neonate N00.CNhs11214.646-21G723.14
kidney, neonate N10.CNhs11206.758-6D523.08
kidney, neonate N20.CNhs11113.832-19I122.58
kidney, neonate N25.CNhs11122.1353-25F323.08
kidney, neonate N30.CNhs11203.1385-42H127.27
liver, adult pregnant day01.CNhs10466.508-5B218.68
liver, embryo E12.CNhs10601.355-15F814.52
liver, embryo E13.CNhs10524.378-3H613.96
liver, embryo E14.CNhs10594.409-16E113.94
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F515.19
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G415.25
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G214.00
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B916.85
liver, neonate N20.CNhs11220.823-25A324.75
liver, neonate N25.CNhs11198.1368-26H117.58
liver, neonate N30.CNhs11106.1382-42D127.98
lung, adult.CNhs10474.28-22B123.28
lung, embryo E12.CNhs10522.354-16G213.83
lung, embryo E14.CNhs10604.404-26F817.76
lung, embryo E15.CNhs11020.432-17C516.47
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A620.27
lung, embryo E18.CNhs10583.1287-20I623.80
lung, neonate N00.CNhs11224.640-42C623.81
lung, neonate N06.CNhs11212.683-20E520.81
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E626.31
lung, neonate N20.CNhs11109.822-18A415.57
lung, neonate N25.CNhs11119.1359-25C722.79
lung, neonate N30.CNhs11133.1394-42H222.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H220.42
medulla oblongata, adult.CNhs10477.17-12C230.99
medulla oblongata, neonate N30.CNhs11200.1396-42A331.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I942.09
ovary, adult.CNhs10507.91-2I720.87
ovary, embryo E18.CNhs11040.505-44H721.55
ovary, neonate N00.CNhs11217.1299-22I422.64
oviduct, adult pregnant day01.CNhs10500.988-6G621.78
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F413.11
pancreas, embryo E15.CNhs11042.1556-45F219.95
pancreas, embryo E16.CNhs11003.460-26E517.35
pancreas, embryo E17.CNhs10599.1558-45G323.62
pancreas, embryo E18.CNhs10580.1535-43I722.75
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B612.01
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G825.87
pituitary gland, embryo E12.CNhs11018.346-16E615.85
pituitary gland, embryo E13.CNhs11009.370-44C720.96
pituitary gland, embryo E14.CNhs11037.398-44A522.72
pituitary gland, embryo E15.CNhs10592.427-16B923.41
pituitary gland, embryo E16.CNhs11036.449-43F618.91
pituitary gland, embryo E17.CNhs11039.1265-44F522.38
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I713.14
placenta, adult pregnant day17.CNhs10464.577-18G314.83
prostate, adult.CNhs10470.859-1F837.93
skin, adult.CNhs10492.30-1C317.97
skin, neonate N00.CNhs11124.650-25G415.18
skin, neonate N03.CNhs11215.662-22H317.43
skin, neonate N06.CNhs11097.693-20I517.31
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I116.61
spinal cord, adult.CNhs10505.24-13C928.56
spleen, adult.CNhs10465.25-2G212.64
spleen, embryo E16.CNhs11035.461-43C118.37
spleen, embryo E18.CNhs11011.1271-21F214.26
spleen, neonate N10.CNhs11116.752-24D111.11
spleen, neonate N20.CNhs11112.824-19H111.62
spleen, neonate N25.CNhs11099.1354-25G312.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.12
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E317.08
stomach, embryo E15.CNhs10603.1252-16G817.89
stomach, embryo E16.CNhs11022.459-17D411.56
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B816.59
stomach, neonate N07.CNhs11210.718-18A919.51
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I115.81
submandibular gland, adult.CNhs10469.59-29C128.58
testis, adult.CNhs10504.57-7G521.98
testis, embryo E13.CNhs11031.389-23F519.29
testis, embryo E15.CNhs11034.443-27C515.06
testis, embryo E16.CNhs11033.470-26G518.67
testis, embryo E17.CNhs11029.486-18I516.92
testis, embryo E18.CNhs11027.503-18G515.54
testis, neonate N00.CNhs11189.1300-22B717.60
testis, neonate N07.CNhs11222.726-26I420.57
testis, neonate N10.CNhs11204.763-44D917.30
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E217.57
thymus, adult.CNhs10471.38-12B514.85
thymus, embryo E14.CNhs11041.402-44I417.23
thymus, embryo E15.CNhs11005.430-45I214.28
thymus, embryo E16.CNhs11002.456-26C511.04
thymus, embryo E17.CNhs10581.478-18C111.82
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F812.38
thymus, neonate N03.CNhs11137.2104-43C711.37
thymus, neonate N06.CNhs11197.681-26C412.32
thymus, neonate N07.CNhs11211.713-19D313.03
thymus, neonate N10.CNhs11194.748-24E410.49
thymus, neonate N20.CNhs11186.820-7A210.82
thymus, neonate N25.CNhs11125.1362-25G712.22
thymus, neonate N30.CNhs11132.1393-42G212.04
tongue, adult.CNhs10499.32-1B432.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.75
urinary bladder, adult.CNhs10481.879-12E422.60
uterus, adult pregnant day19.CNhs10497.590-15F520.83
uterus, adult.CNhs10509.92-27E522.34
vagina, adult.CNhs10502.89-27D517.15
vesicular gland, adult.CNhs10491.51-27F826.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I815.46
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H217.59
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B114.67
whole body, embryo E16.CNhs10514.453-14F217.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.69
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.13
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I531.73
whole body, embryo E18.CNhs10516.493-3B323.86
whole body, neonate N00.CNhs10525.657-19C220.20
whole body, neonate N01.CNhs10576.659-23C620.85
whole body, neonate N06.CNhs10515.692-21D123.60
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit2.84e-17122
tube9.41e-16114
structure with developmental contribution from neural crest1.79e-1592
brain3.54e-1547
future brain3.54e-1547
neural tube1.10e-1452
neural rod1.10e-1452
future spinal cord1.10e-1452
neural keel1.10e-1452
regional part of brain1.65e-1446
neurectoderm8.93e-1464
neural plate8.93e-1464
presumptive neural plate8.93e-1464
regional part of nervous system1.76e-1354
pre-chordal neural plate2.94e-1349
ecto-epithelium2.98e-1273
anterior neural tube3.41e-1240
regional part of forebrain1.27e-1139
forebrain1.27e-1139
future forebrain1.27e-1139
ectoderm-derived structure1.55e-0995
ectoderm1.55e-0995
presumptive ectoderm1.55e-0995
central nervous system7.58e-0973
brain grey matter9.19e-0929
regional part of telencephalon9.19e-0929
telencephalon9.19e-0929
gray matter1.92e-0834
nervous system6.02e-0875
cerebral cortex2.44e-0721
cerebral hemisphere2.44e-0721
pallium2.44e-0721
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