FFCP PHASE1:Mm9::chr17:24769553..24769577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22084 | |EntrezGene=22084 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=311 | |MCL_coexpression_id=311 | ||
|TSSclassifier=NA | |||
|UniProt=E9QMW6,Q7TT21,E9QLU3,E9QN11,E9QN07,E9QMZ9,E9QMZ6,E9PY87,Q3UGI8 | |UniProt=E9QMW6,Q7TT21,E9QLU3,E9QN11,E9QN07,E9QMZ9,E9QMZ6,E9PY87,Q3UGI8 | ||
|association_with_transcript=0bp_to_ENSMUST00000088420,ENSMUST00000097373,ENSMUST00000097374,ENSMUST00000115290,ENSMUST00000115291,ENSMUST00000115292,ENSMUST00000115294,ENSMUST00000163283,NM_001039363,NM_011647,uc008awz.1,uc008axa.1,uc008axb.1,uc008axc.1,uc008axd.1,uc008axe.1,uc008axg.1,uc008axh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000088420,ENSMUST00000097373,ENSMUST00000097374,ENSMUST00000115290,ENSMUST00000115291,ENSMUST00000115292,ENSMUST00000115294,ENSMUST00000163283,NM_001039363,NM_011647,uc008awz.1,uc008axa.1,uc008axb.1,uc008axc.1,uc008axd.1,uc008axe.1,uc008axg.1,uc008axh.1_5end | ||
|cluster_id=chr17:24769553..24769577,- | |||
|description=CAGE_peak_1_at_Tsc2_5end | |description=CAGE_peak_1_at_Tsc2_5end | ||
|id=chr17:24769553..24769577,- | |id=chr17:24769553..24769577,- | ||
Latest revision as of 01:40, 26 September 2015
| Short description: | p1@Tsc2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tsc2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:311 |
| Association with transcript: | 0bp_to_ENSMUST00000088420, ENSMUST00000097373, ENSMUST00000097374, ENSMUST00000115290, ENSMUST00000115291, ENSMUST00000115292, ENSMUST00000115294, ENSMUST00000163283, NM_001039363, NM_011647, uc008awz.1, uc008axa.1, uc008axb.1, uc008axc.1, uc008axd.1, uc008axe.1, uc008axg.1, uc008axh.1_5end |
| EntrezGene: | Tsc2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 2.84e-17 | 122 |
| tube | 9.41e-16 | 114 |
| structure with developmental contribution from neural crest | 1.79e-15 | 92 |
| brain | 3.54e-15 | 47 |
| future brain | 3.54e-15 | 47 |
| neural tube | 1.10e-14 | 52 |
| neural rod | 1.10e-14 | 52 |
| future spinal cord | 1.10e-14 | 52 |
| neural keel | 1.10e-14 | 52 |
| regional part of brain | 1.65e-14 | 46 |
| neurectoderm | 8.93e-14 | 64 |
| neural plate | 8.93e-14 | 64 |
| presumptive neural plate | 8.93e-14 | 64 |
| regional part of nervous system | 1.76e-13 | 54 |
| pre-chordal neural plate | 2.94e-13 | 49 |
| ecto-epithelium | 2.98e-12 | 73 |
| anterior neural tube | 3.41e-12 | 40 |
| regional part of forebrain | 1.27e-11 | 39 |
| forebrain | 1.27e-11 | 39 |
| future forebrain | 1.27e-11 | 39 |
| ectoderm-derived structure | 1.55e-09 | 95 |
| ectoderm | 1.55e-09 | 95 |
| presumptive ectoderm | 1.55e-09 | 95 |
| central nervous system | 7.58e-09 | 73 |
| brain grey matter | 9.19e-09 | 29 |
| regional part of telencephalon | 9.19e-09 | 29 |
| telencephalon | 9.19e-09 | 29 |
| gray matter | 1.92e-08 | 34 |
| nervous system | 6.02e-08 | 75 |
| cerebral cortex | 2.44e-07 | 21 |
| cerebral hemisphere | 2.44e-07 | 21 |
| pallium | 2.44e-07 | 21 |
