FFCP PHASE1:Mm9::chr9:100471468..100471547,-: Difference between revisions
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{{FFCP|EntrezGene=245020|HGNC=|MCL_coexpression_id=1|UniProt=D3YVE8|association_with_transcript=0bp_to_ENSMUST00000093792,NM_001101483,uc012gze.1_5end|description=CAGE_peak_1_at_Tmem22_5end|id=chr9:100471468..100471547,-|ontology_enrichment_celltype=CL:0000540!7.37e-12!33;CL:0000047!7.37e-12!33;CL:0000031!7.37e-12!33;CL:0000404!7.37e-12!33;CL:0000221!9.87e-10!44;CL:0000133!9.87e-10!44;CL:0002319!2.00e-09!43;CL:0000117!1.39e-08!23;CL:0000337!1.39e-08!23;CL:0000393!1.49e-07!39;CL:0000211!1.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,5.20e-12,33;CL:0000047,5.20e-12,33;CL:0000031,5.20e-12,33;CL:0000404,5.20e-12,33;CL:0000221,7.31e-10,44;CL:0000133,7.31e-10,44;CL:0002319,1.57e-09,43;CL:0000393,1.81e-08,39;CL:0000211,1.81e-08,39;CL:0000117,2.08e-08,23;CL:0000337,2.08e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-25!73;UBERON:0005743!1.13e-25!73;UBERON:0000073!1.14e-25!75;UBERON:0001016!1.14e-25!75;UBERON:0002346!2.70e-25!71;UBERON:0003075!2.70e-25!71;UBERON:0007284!2.70e-25!71;UBERON:0004121!2.38e-24!102;UBERON:0000924!2.38e-24!102;UBERON:0006601!2.38e-24!102;UBERON:0000033!3.00e-19!63;UBERON:0001049!8.38e-19!52;UBERON:0005068!8.38e-19!52;UBERON:0006241!8.38e-19!52;UBERON:0007135!8.38e-19!52;UBERON:0000955!7.56e-18!50;UBERON:0006238!7.56e-18!50;UBERON:0002616!3.26e-17!49;UBERON:0003056!1.92e-15!49;UBERON:0003080!2.05e-13!40;UBERON:0000025!2.99e-13!114;UBERON:0004111!7.14e-13!122;UBERON:0002780!9.52e-13!39;UBERON:0001890!9.52e-13!39;UBERON:0006240!9.52e-13!39;UBERON:0002020!9.35e-12!34;UBERON:0000468!7.81e-10!333;UBERON:0002791!4.63e-09!29;UBERON:0003528!4.63e-09!29;UBERON:0001893!4.63e-09!29;UBERON:0000922!1.30e-07!328;UBERON:0002021!4.45e-07!10;UBERON:0000411!4.45e-07!10;UBERON:0001950!4.45e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.45e-31,92;UBERON:0001017,1.06e-27,73;UBERON:0001016,3.01e-27,75;UBERON:0002346,3.11e-24,64;UBERON:0003075,3.11e-24,64;UBERON:0007284,3.11e-24,64;UBERON:0004121,7.76e-24,95;UBERON:0000924,7.76e-24,95;UBERON:0006601,7.76e-24,95;UBERON:0000073,1.70e-21,54;UBERON:0001049,6.34e-20,52;UBERON:0005068,6.34e-20,52;UBERON:0006241,6.34e-20,52;UBERON:0007135,6.34e-20,52;UBERON:0010371,2.22e-19,73;UBERON:0000955,1.07e-16,47;UBERON:0006238,1.07e-16,47;UBERON:0002616,5.04e-16,46;UBERON:0003056,5.29e-16,49;UBERON:0000025,5.54e-14,114;UBERON:0003080,9.55e-14,40;UBERON:0004111,9.89e-14,122;UBERON:0002780,5.04e-13,39;UBERON:0001890,5.04e-13,39;UBERON:0006240,5.04e-13,39;UBERON:0002020,6.53e-12,34;UBERON:0003528,5.33e-09,29;UBERON:0002791,5.33e-09,29;UBERON:0001893,5.33e-09,29;UBERON:0002021,1.11e-07,10;UBERON:0000411,1.11e-07,10;UBERON:0001950,1.11e-07,10;UBERON:0003076,4.42e-07,12;UBERON:0003057,4.42e-07,12|phase1_expression=1.76163731815273,0,0,0.30246421130683,0.500895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,3.74190476664707,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,1.09843091367236,0.194429899074283,1.39986421625363,5.75010257459886,0,0,0,0,1.14613375975503,0,7.08107613008592,8.99284664762456,3.80298842103708,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0,1.24427534770173,0.675029691658453,0.420649922702764,16.8534080798244,14.5773237028065,1.34739879136449,2.68367318851062,0.919218786610021,16.5173821499083,23.3667828695894,30.7213066512487,5.93488294785872,6.49562269577109,5.2091337055676,32.943593882163,37.7050948721226,33.768412758675,15.0260578591571,12.386336229522,7.08317894136142,0.832988126665025,3.40072020480535,2.02905142091174,1.72084775396277,0,0,0,0,0.842666520790511,0,0,0,3.80277233397037,0,0,0,1.08245520505607,0.253359865475099,1.51657333504435,0.91347103775248,0.776813650941515,5.64080128446334,3.29622120855658,4.56698217468212,2.99800146432876,5.27529241934179,2.58695155698551,2.38766523526383,0,0.144599356919912,0,0.808834249737046,0,0,0,14.3462590535658,11.7290155815535,0.510914110417183,0.239630249011841,0,0,38.4961943270394,12.3525162761029,3.64397621127307,13.5582969749976,18.4115129277838,29.0903262383384,20.6046404096052,0.712875546952214,0.497627882440372,0.758168275301024,2.52530227063769,1.56144531555244,3.21862946206862,2.34080768746954,1.65775299619287,2.78949646520444,4.09963904911519,4.12287588062807,8.2785078636485,0.215567992932842,1.32374256117473,1.23165786914764,1.31517439456545,1.66828349535359,0.696504333044333,0.61734640922383,1.39323986772945,0.702213187313235,0,0.284163499395593,4.14251545071004,3.75241695969754,4.32148947506436,4.26140524053378,2.36117078096885,4.31947916084659,4.88321283975857,4.56064782379353,2.21854150497622,4.11399624783701,4.76085645829376,2.59420190546738,3.21639972335731,3.51280184465681,4.02619256281115,14.2997165023607,1.74937841044784,0.330418782983798,1.05780226665418,0.853153002140936,1.85789337488351,1.030939690576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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245020 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YVE8 | |||
|association_with_transcript=0bp_to_ENSMUST00000093792,NM_001101483,uc012gze.1_5end | |||
|cluster_id=chr9:100471468..100471547,- | |||
|description=CAGE_peak_1_at_Tmem22_5end | |||
|id=chr9:100471468..100471547,- | |||
|ontology_enrichment_celltype=CL:0000540!7.37e-12!33;CL:0000047!7.37e-12!33;CL:0000031!7.37e-12!33;CL:0000404!7.37e-12!33;CL:0000221!9.87e-10!44;CL:0000133!9.87e-10!44;CL:0002319!2.00e-09!43;CL:0000117!1.39e-08!23;CL:0000337!1.39e-08!23;CL:0000393!1.49e-07!39;CL:0000211!1.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.20e-12,33;CL:0000047,5.20e-12,33;CL:0000031,5.20e-12,33;CL:0000404,5.20e-12,33;CL:0000221,7.31e-10,44;CL:0000133,7.31e-10,44;CL:0002319,1.57e-09,43;CL:0000393,1.81e-08,39;CL:0000211,1.81e-08,39;CL:0000117,2.08e-08,23;CL:0000337,2.08e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-25!73;UBERON:0005743!1.13e-25!73;UBERON:0000073!1.14e-25!75;UBERON:0001016!1.14e-25!75;UBERON:0002346!2.70e-25!71;UBERON:0003075!2.70e-25!71;UBERON:0007284!2.70e-25!71;UBERON:0004121!2.38e-24!102;UBERON:0000924!2.38e-24!102;UBERON:0006601!2.38e-24!102;UBERON:0000033!3.00e-19!63;UBERON:0001049!8.38e-19!52;UBERON:0005068!8.38e-19!52;UBERON:0006241!8.38e-19!52;UBERON:0007135!8.38e-19!52;UBERON:0000955!7.56e-18!50;UBERON:0006238!7.56e-18!50;UBERON:0002616!3.26e-17!49;UBERON:0003056!1.92e-15!49;UBERON:0003080!2.05e-13!40;UBERON:0000025!2.99e-13!114;UBERON:0004111!7.14e-13!122;UBERON:0002780!9.52e-13!39;UBERON:0001890!9.52e-13!39;UBERON:0006240!9.52e-13!39;UBERON:0002020!9.35e-12!34;UBERON:0000468!7.81e-10!333;UBERON:0002791!4.63e-09!29;UBERON:0003528!4.63e-09!29;UBERON:0001893!4.63e-09!29;UBERON:0000922!1.30e-07!328;UBERON:0002021!4.45e-07!10;UBERON:0000411!4.45e-07!10;UBERON:0001950!4.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.45e-31,92;UBERON:0001017,1.06e-27,73;UBERON:0001016,3.01e-27,75;UBERON:0002346,3.11e-24,64;UBERON:0003075,3.11e-24,64;UBERON:0007284,3.11e-24,64;UBERON:0004121,7.76e-24,95;UBERON:0000924,7.76e-24,95;UBERON:0006601,7.76e-24,95;UBERON:0000073,1.70e-21,54;UBERON:0001049,6.34e-20,52;UBERON:0005068,6.34e-20,52;UBERON:0006241,6.34e-20,52;UBERON:0007135,6.34e-20,52;UBERON:0010371,2.22e-19,73;UBERON:0000955,1.07e-16,47;UBERON:0006238,1.07e-16,47;UBERON:0002616,5.04e-16,46;UBERON:0003056,5.29e-16,49;UBERON:0000025,5.54e-14,114;UBERON:0003080,9.55e-14,40;UBERON:0004111,9.89e-14,122;UBERON:0002780,5.04e-13,39;UBERON:0001890,5.04e-13,39;UBERON:0006240,5.04e-13,39;UBERON:0002020,6.53e-12,34;UBERON:0003528,5.33e-09,29;UBERON:0002791,5.33e-09,29;UBERON:0001893,5.33e-09,29;UBERON:0002021,1.11e-07,10;UBERON:0000411,1.11e-07,10;UBERON:0001950,1.11e-07,10;UBERON:0003076,4.42e-07,12;UBERON:0003057,4.42e-07,12 | |||
|phase1_expression=1.76163731815273,0,0,0.30246421130683,0.500895729946347,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,3.74190476664707,0,0,0.319984845586813,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,1.09843091367236,0.194429899074283,1.39986421625363,5.75010257459886,0,0,0,0,1.14613375975503,0,7.08107613008592,8.99284664762456,3.80298842103708,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0,1.24427534770173,0.675029691658453,0.420649922702764,16.8534080798244,14.5773237028065,1.34739879136449,2.68367318851062,0.919218786610021,16.5173821499083,23.3667828695894,30.7213066512487,5.93488294785872,6.49562269577109,5.2091337055676,32.943593882163,37.7050948721226,33.768412758675,15.0260578591571,12.386336229522,7.08317894136142,0.832988126665025,3.40072020480535,2.02905142091174,1.72084775396277,0,0,0,0,0.842666520790511,0,0,0,3.80277233397037,0,0,0,1.08245520505607,0.253359865475099,1.51657333504435,0.91347103775248,0.776813650941515,5.64080128446334,3.29622120855658,4.56698217468212,2.99800146432876,5.27529241934179,2.58695155698551,2.38766523526383,0,0.144599356919912,0,0.808834249737046,0,0,0,14.3462590535658,11.7290155815535,0.510914110417183,0.239630249011841,0,0,38.4961943270394,12.3525162761029,3.64397621127307,13.5582969749976,18.4115129277838,29.0903262383384,20.6046404096052,0.712875546952214,0.497627882440372,0.758168275301024,2.52530227063769,1.56144531555244,3.21862946206862,2.34080768746954,1.65775299619287,2.78949646520444,4.09963904911519,4.12287588062807,8.2785078636485,0.215567992932842,1.32374256117473,1.23165786914764,1.31517439456545,1.66828349535359,0.696504333044333,0.61734640922383,1.39323986772945,0.702213187313235,0,0.284163499395593,4.14251545071004,3.75241695969754,4.32148947506436,4.26140524053378,2.36117078096885,4.31947916084659,4.88321283975857,4.56064782379353,2.21854150497622,4.11399624783701,4.76085645829376,2.59420190546738,3.21639972335731,3.51280184465681,4.02619256281115,14.2997165023607,1.74937841044784,0.330418782983798,1.05780226665418,0.853153002140936,1.85789337488351,1.03093969057675,1.00841762311671,1.77902435075896,0.570676878337677,0,0.658795818896044,1.50801125280162,0.795825888164603,1.16978452271472,0.898819408654221,0.648414149624083,0.796565093017469,1.70701110857774,1.14248512609729,0,2.24016460629846,1.93952487167626,1.33258057791605,1.83385957660346,0.590440591918409,1.255989822731,1.60416313098341,0.592905254174298,1.00107063429656,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,1.13494658742525,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,2.95605104266567,1.32643988239339,1.62964976442026,2.71592137240301,3.28566347603903,3.1826188913945,3.57065461329021,1.75620283072019,4.72905432318573,4.4292937929755,4.30527875375215,2.62181303545181,3.45369963731791,4.05017364028232,0,0,0,0,22.7981837782665,28.3652281553132,0,0,7.88770548540642,11.7131623288992,8.18608911384636,2.62865677747807,2.45078541490634,2.26461224631066,5.66734982344852,6.72188473196017,6.7198922250909,15.7447445046685,0.709700426041343,0.890328018336276,0.81443479676788,0.494910368917606,0,2.18502572539483,1.81394134178851,1.50884063804718,2.06711325016541,1.22974059177571,1.80899805217755,1.45413491791002,1.42598951353889,0.948110273807448,1.05418608574999,0,6.12791290356818,1.98067203434441,2.97524972700335,4.28674070063185,2.83744373827638,5.17269571046005,4.60737257685939,3.65357938937519,0.469343416127421,0.847328283455281,1.54369878638473,0,0.484393280087717,0.663442174209714,0.238744688006273,0,0.582961673259701,14.8340241608408,0,0.206386867963223,0.740778109478847,0.188368457004691,0.136694227721025,0,0.509935289981566,0,0.138199973804424,0.954670618015114,1.58167996790568,1.42323626988794,1.18805874903981,0.418176592028937,0.87345025498471,1.34864346384821,0.826534557253359,1.30877970992015,1.16653475962614,1.24267862617385,0.56369293868419,1.04661582230785,0.66183396182839,1.55560950675238,1.80823752868824,0.844780627453891,0.704143431874524,0,0,0.724752362478018,0.576060012515731,0.316011120628178,0.810900861160657,0.410843828659309,0.649604114888975,0,0,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0,0,0,0,0.807424709485281,0.167884616364078,1.15913756419314,0.563047426353546,0.36630324853453,0.214368379079066,1.50471631210609,9.60078132449013,14.2700823317225,14.8952833494243,14.0919609521824,16.4419804744954,11.3309084608455,15.5255175053315,14.4102785031751,9.06284817968409,18.6393712230655,1.24544817101012,2.39414924040619,1.19513524027894,1.94485373654635,0.209613162627982,1.10306105070008,1.77797382241292,2.47242068686673,0.64183841918363,1.51618327058278,1.01391719956096,2.26351609663291,2.1537546718073,2.17685518176556,2.35485422718014,2.38146845641537,2.085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| |||
|short_description=p1@Tmem22 | |||
}} |
Latest revision as of 01:21, 26 September 2015
Short description: | p1@Tmem22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem22_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000093792, NM_001101483, uc012gze.1_5end |
EntrezGene: | Tmem22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.20e-12 | 33 |
neuronal stem cell | 5.20e-12 | 33 |
neuroblast | 5.20e-12 | 33 |
electrically signaling cell | 5.20e-12 | 33 |
ectodermal cell | 7.31e-10 | 44 |
neurectodermal cell | 7.31e-10 | 44 |
neural cell | 1.57e-09 | 43 |
electrically responsive cell | 1.81e-08 | 39 |
electrically active cell | 1.81e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.08e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.08e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.45e-31 | 92 |
central nervous system | 1.06e-27 | 73 |
nervous system | 3.01e-27 | 75 |
neurectoderm | 3.11e-24 | 64 |
neural plate | 3.11e-24 | 64 |
presumptive neural plate | 3.11e-24 | 64 |
ectoderm-derived structure | 7.76e-24 | 95 |
ectoderm | 7.76e-24 | 95 |
presumptive ectoderm | 7.76e-24 | 95 |
regional part of nervous system | 1.70e-21 | 54 |
neural tube | 6.34e-20 | 52 |
neural rod | 6.34e-20 | 52 |
future spinal cord | 6.34e-20 | 52 |
neural keel | 6.34e-20 | 52 |
ecto-epithelium | 2.22e-19 | 73 |
brain | 1.07e-16 | 47 |
future brain | 1.07e-16 | 47 |
regional part of brain | 5.04e-16 | 46 |
pre-chordal neural plate | 5.29e-16 | 49 |
tube | 5.54e-14 | 114 |
anterior neural tube | 9.55e-14 | 40 |
anatomical conduit | 9.89e-14 | 122 |
regional part of forebrain | 5.04e-13 | 39 |
forebrain | 5.04e-13 | 39 |
future forebrain | 5.04e-13 | 39 |
gray matter | 6.53e-12 | 34 |
brain grey matter | 5.33e-09 | 29 |
regional part of telencephalon | 5.33e-09 | 29 |
telencephalon | 5.33e-09 | 29 |
occipital lobe | 1.11e-07 | 10 |
visual cortex | 1.11e-07 | 10 |
neocortex | 1.11e-07 | 10 |
posterior neural tube | 4.42e-07 | 12 |
chordal neural plate | 4.42e-07 | 12 |