Personal tools

FFCP PHASE1:Mm9::chr5:45190882..45190905,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=16826|HGNC=|MCL_coexpression_id=1762|UniProt=O55203|association_with_transcript=40bp_to_ENSMUST00000070748,ENSMUST00000114010,NM_001077398,NM_010698,uc008xis.1,uc008xit.1,uc008xiu.1_5end|description=CAGE_peak_1_at_Ldb2_5end|id=chr5:45190882..45190905,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.03e-12!333;UBERON:0000922!9.01e-09!328;UBERON:0002048!3.08e-08!14;UBERON:0000117!3.08e-08!14;UBERON:0000171!3.08e-08!14;UBERON:0000170!3.08e-08!14;UBERON:0005597!3.08e-08!14;UBERON:0000118!3.08e-08!14;UBERON:0000479!2.63e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.87e-08,14;UBERON:0000117,2.87e-08,14;UBERON:0000171,2.87e-08,14;UBERON:0000170,2.87e-08,14;UBERON:0005597,2.87e-08,14;UBERON:0000118,2.87e-08,14;UBERON:0000479,3.40e-07,349|phase1_expression=24.3426247599287,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,0.315462165358238,0.274228867211478,0.42438965179803,36.56861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,1.97717564461025,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,20.636279007679,29.0945038599618,26.6209189472595,0,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,35.5655370218078,38.6116983628635,31.3384192413559,23.1377297367081,24.2955395046775,39.1970557487853,30.8622416678721,50.5570332635512,12.1127469099328,14.8117312178818,13.5173749265494,21.6293511877518,25.7080278522771,20.8365348222704,10.6089539620525,10.6924895906019,14.0574387954665,26.5165726926301,35.0234334765793,24.2319279572891,0.530083353332288,2.11600368298999,56.5235752968272,25.8127163094416,0,3.2382191498269,5.84798775702902,5.82434953226536,9.69066498909088,0,0,0,27.4644668564527,0,0,0,0,0,0,9.81981365583916,57.2252722860249,30.1337542301594,36.4319186208885,36.2313919191448,21.2166257475574,27.4315205805773,45.1540635401106,17.4676561948249,11.6181634835156,25.4494868179045,3.5384422077995,25.0738617418484,17.0047969214503,21.3345111379498,9.31958806090611,1.75668478206928,2.51336048176146,4.59822699375465,0,0,0,48.0827952489481,30.1950397860293,85.3193050846349,83.0880250519081,71.0888971378319,16.2074674756457,29.8523924044674,57.1318831200274,19.7807083270048,5.55990068554084,13.4682787767343,16.7855371421888,13.5642241615749,20.1669585381991,22.9071323110287,24.6292126927807,27.288222420673,23.8002380381711,30.5269977472039,24.1436152084783,41.7924437170881,58.2398220982671,34.1945342587017,54.2192135989916,43.879772981793,40.3332987359569,61.1035199132774,0,0,0.568326998791185,8.69928244649108,10.3191466391682,15.6653993471083,17.2823656977203,18.495837784256,19.4376562238097,27.4390054805481,18.2425912951741,18.3321587516456,12.8356682932515,25.1176220041016,24.3206428637567,18.2749984281665,18.8813099150304,22.4124719329821,56.7782861123144,49.2913093296772,0.991256348951394,6.34681359992506,65.4794929143168,59.2203513244118,39.9489130098489,31.8659968904881,27.1301213490742,22.2563982551694,5.21981967698963,15.481701744057,19.8554814952213,22.0841683965677,19.8863368861503,4.49409704327111,10.3746263939853,7.16908583715722,70.3667912535933,76.5465034485183,136.376360164427,115.470302888293,102.794818198842,104.432235816684,119.264109016349,56.8299069721468,62.1714962251844,43.1890073726302,12.1545577105731,7.17433954579204,9.23827277032054,8.99448449539415,9.12870546248263,10.3706178693539,13.2405442926338,14.9601991474422,15.5649817704034,10.9824565275233,24.4405951096503,30.5155577088173,24.6509761760503,21.9743623813987,12.3784215330119,17.3679667690812,133.022296919955,21.0335467065238,32.7559602648472,48.716839617479,55.152208347798,61.9773152534718,73.5554850337782,101.859764181771,175.920820822509,181.158116132698,136.812191508124,191.228488273266,145.746124694816,136.548711300947,0,0,7.37646409528554,13.2449638226272,19.7477225684984,15.8235776899474,0,18.6828486131236,13.2513452154828,13.6653560503823,19.1726823982191,14.3381278771531,17.8238939265915,16.9845918473299,12.9539424535966,14.6127928955656,21.7408277870588,3.85585579706168,38.4657630914408,56.8029275698544,65.9692185381983,62.1937363606459,9.2921596837974,42.2438306909668,22.6742667723563,31.497048319235,31.5973025382427,33.817866273832,22.4832615056352,35.262771759318,30.658774541086,22.7546465713787,13.7044191147498,13.4076206222643,12.5962654128902,19.8067203434441,12.9358683782754,18.0043109426538,25.8916741117719,23.3663151058712,32.4161570586178,22.2259412853657,43.4142659917864,10.3797714723272,7.71849393192367,14.8397627647332,24.3811284310817,20.3857686257167,17.7864792564673,14.9368218768006,13.699599321603,26.8866687915239,6.32222258952055,43.1348554043135,66.4848353257265,23.3576886685817,9.29520748502971,8.00723606222829,0,0.139951452323658,0.138199973804424,20.0480829783174,44.9197110885212,42.4937686295114,40.9340241714627,35.9631869144886,31.4442091794496,34.7950013672837,35.1277186832678,15.4436005770577,6.86959358446502,3.72803587852155,0,65.3387306212187,62.2123924118687,87.1141323781333,70.0046243249303,69.272011451219,56.0967600726704,26.6918988930098,10.171356409294,5.31485065817213,4.60848010012585,3.16011120628178,7.29810775044591,11.8117600739551,7.40548690973432,8.23522800070415,6.95384741734427,3.846254384639,3.69223817936443,3.23092639834072,2.81965184623499,2.92395936896837,1.8516997340553,1.44317762460494,1.16876902181569,17.0047787711409,0,0,0,14.1028403643499,36.5980827129805,40.1102057145311,28.2966260384367,8.02515366456581,56.4751842617067,72.2710621316268,60.1540289111366,56.1959906263858,53.4364365421101,53.6329667146687,51.3017100176172,64.8462532642877,67.0650765296623,45.5629074341602,18.6817225651518,23.5424675306608,33.8052539393186,33.7918336724929,28.7170032800336,29.9664918773523,45.5605791993311,43.2673620201678,57.7654577265267,49.7813507174681,53.9910908766211,41.8750477877089,44.6669990631339,42.9608772636673,37.6202321659267,42.3901385241936,35.5764880650706,30.4796568332654,36.6756451714943,34.8861440718522,46.6302183244165,46.6761370199058,40.0572799111499,45.3480819892865,40.9375804806688,42.9842208089717,42.622217679356,42.3542235414927,40.1980176983751,46.0136662759345,37.6073007453632,35.5601181375784,30.6923282377267,38.8891471376775,43.7898006927191,40.2195030480093,33.218288399248,44.9080502960943,35.388341432736,35.956401316481,35.4757788499245|short_description=p1@Ldb2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16826
|HGNC=
|MCL_coexpression_id=1762
|TSSclassifier=NA
|UniProt=O55203
|association_with_transcript=40bp_to_ENSMUST00000070748,ENSMUST00000114010,NM_001077398,NM_010698,uc008xis.1,uc008xit.1,uc008xiu.1_5end
|cluster_id=chr5:45190882..45190905,-
|description=CAGE_peak_1_at_Ldb2_5end
|id=chr5:45190882..45190905,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!1.03e-12!333;UBERON:0000922!9.01e-09!328;UBERON:0002048!3.08e-08!14;UBERON:0000117!3.08e-08!14;UBERON:0000171!3.08e-08!14;UBERON:0000170!3.08e-08!14;UBERON:0005597!3.08e-08!14;UBERON:0000118!3.08e-08!14;UBERON:0000479!2.63e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.87e-08,14;UBERON:0000117,2.87e-08,14;UBERON:0000171,2.87e-08,14;UBERON:0000170,2.87e-08,14;UBERON:0005597,2.87e-08,14;UBERON:0000118,2.87e-08,14;UBERON:0000479,3.40e-07,349
|phase1_expression=24.3426247599287,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,0.315462165358238,0.274228867211478,0.42438965179803,36.56861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,1.97717564461025,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,20.636279007679,29.0945038599618,26.6209189472595,0,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,35.5655370218078,38.6116983628635,31.3384192413559,23.1377297367081,24.2955395046775,39.1970557487853,30.8622416678721,50.5570332635512,12.1127469099328,14.8117312178818,13.5173749265494,21.6293511877518,25.7080278522771,20.8365348222704,10.6089539620525,10.6924895906019,14.0574387954665,26.5165726926301,35.0234334765793,24.2319279572891,0.530083353332288,2.11600368298999,56.5235752968272,25.8127163094416,0,3.2382191498269,5.84798775702902,5.82434953226536,9.69066498909088,0,0,0,27.4644668564527,0,0,0,0,0,0,9.81981365583916,57.2252722860249,30.1337542301594,36.4319186208885,36.2313919191448,21.2166257475574,27.4315205805773,45.1540635401106,17.4676561948249,11.6181634835156,25.4494868179045,3.5384422077995,25.0738617418484,17.0047969214503,21.3345111379498,9.31958806090611,1.75668478206928,2.51336048176146,4.59822699375465,0,0,0,48.0827952489481,30.1950397860293,85.3193050846349,83.0880250519081,71.0888971378319,16.2074674756457,29.8523924044674,57.1318831200274,19.7807083270048,5.55990068554084,13.4682787767343,16.7855371421888,13.5642241615749,20.1669585381991,22.9071323110287,24.6292126927807,27.288222420673,23.8002380381711,30.5269977472039,24.1436152084783,41.7924437170881,58.2398220982671,34.1945342587017,54.2192135989916,43.879772981793,40.3332987359569,61.1035199132774,0,0,0.568326998791185,8.69928244649108,10.3191466391682,15.6653993471083,17.2823656977203,18.495837784256,19.4376562238097,27.4390054805481,18.2425912951741,18.3321587516456,12.8356682932515,25.1176220041016,24.3206428637567,18.2749984281665,18.8813099150304,22.4124719329821,56.7782861123144,49.2913093296772,0.991256348951394,6.34681359992506,65.4794929143168,59.2203513244118,39.9489130098489,31.8659968904881,27.1301213490742,22.2563982551694,5.21981967698963,15.481701744057,19.8554814952213,22.0841683965677,19.8863368861503,4.49409704327111,10.3746263939853,7.16908583715722,70.3667912535933,76.5465034485183,136.376360164427,115.470302888293,102.794818198842,104.432235816684,119.264109016349,56.8299069721468,62.1714962251844,43.1890073726302,12.1545577105731,7.17433954579204,9.23827277032054,8.99448449539415,9.12870546248263,10.3706178693539,13.2405442926338,14.9601991474422,15.5649817704034,10.9824565275233,24.4405951096503,30.5155577088173,24.6509761760503,21.9743623813987,12.3784215330119,17.3679667690812,133.022296919955,21.0335467065238,32.7559602648472,48.716839617479,55.152208347798,61.9773152534718,73.5554850337782,101.859764181771,175.920820822509,181.158116132698,136.812191508124,191.228488273266,145.746124694816,136.548711300947,0,0,7.37646409528554,13.2449638226272,19.7477225684984,15.8235776899474,0,18.6828486131236,13.2513452154828,13.6653560503823,19.1726823982191,14.3381278771531,17.8238939265915,16.9845918473299,12.9539424535966,14.6127928955656,21.7408277870588,3.85585579706168,38.4657630914408,56.8029275698544,65.9692185381983,62.1937363606459,9.2921596837974,42.2438306909668,22.6742667723563,31.497048319235,31.5973025382427,33.817866273832,22.4832615056352,35.262771759318,30.658774541086,22.7546465713787,13.7044191147498,13.4076206222643,12.5962654128902,19.8067203434441,12.9358683782754,18.0043109426538,25.8916741117719,23.3663151058712,32.4161570586178,22.2259412853657,43.4142659917864,10.3797714723272,7.71849393192367,14.8397627647332,24.3811284310817,20.3857686257167,17.7864792564673,14.9368218768006,13.699599321603,26.8866687915239,6.32222258952055,43.1348554043135,66.4848353257265,23.3576886685817,9.29520748502971,8.00723606222829,0,0.139951452323658,0.138199973804424,20.0480829783174,44.9197110885212,42.4937686295114,40.9340241714627,35.9631869144886,31.4442091794496,34.7950013672837,35.1277186832678,15.4436005770577,6.86959358446502,3.72803587852155,0,65.3387306212187,62.2123924118687,87.1141323781333,70.0046243249303,69.272011451219,56.0967600726704,26.6918988930098,10.171356409294,5.31485065817213,4.60848010012585,3.16011120628178,7.29810775044591,11.8117600739551,7.40548690973432,8.23522800070415,6.95384741734427,3.846254384639,3.69223817936443,3.23092639834072,2.81965184623499,2.92395936896837,1.8516997340553,1.44317762460494,1.16876902181569,17.0047787711409,0,0,0,14.1028403643499,36.5980827129805,40.1102057145311,28.2966260384367,8.02515366456581,56.4751842617067,72.2710621316268,60.1540289111366,56.1959906263858,53.4364365421101,53.6329667146687,51.3017100176172,64.8462532642877,67.0650765296623,45.5629074341602,18.6817225651518,23.5424675306608,33.8052539393186,33.7918336724929,28.7170032800336,29.9664918773523,45.5605791993311,43.2673620201678,57.7654577265267,49.7813507174681,53.9910908766211,41.8750477877089,44.6669990631339,42.9608772636673,37.6202321659267,42.3901385241936,35.5764880650706,30.4796568332654,36.6756451714943,34.8861440718522,46.6302183244165,46.6761370199058,40.0572799111499,45.3480819892865,40.9375804806688,42.9842208089717,42.622217679356,42.3542235414927,40.1980176983751,46.0136662759345,37.6073007453632,35.5601181375784,30.6923282377267,38.8891471376775,43.7898006927191,40.2195030480093,33.218288399248,44.9080502960943,35.388341432736,35.956401316481,35.4757788499245
|short_description=p1@Ldb2
}}

Latest revision as of 01:20, 26 September 2015

Short description:p1@Ldb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ldb2_5end
Coexpression cluster:MCL_coexpression_mm9:1762
Association with transcript: 40bp_to_ENSMUST00000070748, ENSMUST00000114010, NM_001077398, NM_010698, uc008xis.1, uc008xit.1, uc008xiu.1_5end
EntrezGene:Ldb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ldb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C320.64
Mouse Granule cells, donor2.CNhs12357.11731-123E329.09
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D239.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D650.56
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.23
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G356.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.82
accessory axillary lymph node, adult.CNhs10475.1063-29H957.23
adrenal gland, adult.CNhs10508.49-24D730.13
adrenal gland, embryo E14.CNhs11038.406-44C536.43
adrenal gland, embryo E16.CNhs11004.1254-43D636.23
adrenal gland, embryo E17.CNhs11043.1263-45I121.22
adrenal gland, embryo E18.CNhs11026.1262-18F527.43
adrenal gland, neonate N00.CNhs11191.1311-23C145.15
adrenal gland, neonate N25.CNhs11223.1377-27I317.47
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H125.45
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F525.07
bone (os femoris), neonate N16.CNhs11225.1525-43A617.00
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A448.08
corpus striatum, adult.CNhs10487.19-21D830.20
corpus striatum, neonate N00.CNhs11226.630-43F185.32
cortex, adult.CNhs10473.12-14D583.09
cortex, neonate N30.CNhs11107.1392-42F271.09
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B229.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B157.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.78
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C616.79
eyeball, embryo E14.CNhs10521.399-16E213.56
eyeball, embryo E15.CNhs10593.426-16C920.17
eyeball, embryo E17.CNhs11023.1261-18D422.91
eyeball, neonate N00.CNhs11207.633-15C624.63
eyeball, neonate N01.CNhs11140.1532-43E727.29
eyeball, neonate N02.CNhs11205.1551-44G823.80
eyeball, neonate N16.CNhs11188.777-19A230.53
forelimb, embryo E11.CNhs10596.335-25E224.14
forelimb, embryo E12.CNhs10600.359-14H241.79
forelimb, embryo E13.CNhs10589.384-1E258.24
forelimb, embryo E14.CNhs10577.413-26A834.19
forelimb, embryo E15.CNhs11007.437-20E754.22
forelimb, embryo E17.CNhs10598.1517-43C443.88
forelimb, embryo E18.CNhs11008.1520-43B540.33
gonad, embryo E13.CNhs11044.1564-45I661.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E98.70
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I915.67
heart, embryo E14.CNhs10597.403-26D417.28
heart, embryo E15.CNhs11017.431-16C818.50
heart, embryo E16.CNhs11021.457-17C619.44
heart, embryo E17.CNhs11025.479-18E527.44
heart, embryo E18.CNhs11030.1283-20G318.24
heart, neonate N00.CNhs11213.639-21E318.33
heart, neonate N03.CNhs11221.1349-25I212.84
heart, neonate N10.CNhs11118.749-24G125.12
heart, neonate N16.CNhs11209.782-15G124.32
heart, neonate N20.CNhs11127.821-26I618.27
heart, neonate N25.CNhs11196.1351-25D318.88
heart, neonate N30.CNhs11202.1390-42D222.41
hippocampus, adult.CNhs10478.13-16E856.78
hippocampus, neonate N00.CNhs11228.627-43G149.29
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I565.48
intestine, embryo E13.CNhs11010.381-16D559.22
intestine, embryo E15.CNhs10602.976-16D839.95
intestine, embryo E16.CNhs10585.463-22H431.87
intestine, embryo E17.CNhs10582.482-18D327.13
intestine, embryo E18.CNhs10526.1289-20F722.26
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E915.48
intestine, neonate N06.CNhs11102.688-20B819.86
intestine, neonate N07.CNhs11095.720-20F222.08
intestine, neonate N10.CNhs11098.755-23A519.89
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G17.17
kidney, embryo E14.CNhs10606.411-4I970.37
kidney, embryo E15.CNhs10997.434-16F876.55
kidney, embryo E16.CNhs10584.464-22A5136.38
kidney, embryo E17.CNhs11028.483-18I2115.47
kidney, embryo E18.CNhs11001.1288-20C7102.79
kidney, neonate N00.CNhs11214.646-21G7104.43
kidney, neonate N10.CNhs11206.758-6D5119.26
kidney, neonate N20.CNhs11113.832-19I156.83
kidney, neonate N25.CNhs11122.1353-25F362.17
kidney, neonate N30.CNhs11203.1385-42H143.19
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F87.17
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D79.13
liver, embryo E16.CNhs10523.462-17F510.37
liver, embryo E17.CNhs10510.481-18A313.24
liver, embryo E18.CNhs10579.499-43G414.96
liver, neonate N00.CNhs11117.641-24F415.56
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H230.52
liver, neonate N10.CNhs11115.751-24B924.65
liver, neonate N20.CNhs11220.823-25A321.97
liver, neonate N25.CNhs11198.1368-26H112.38
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B1133.02
lung, embryo E12.CNhs10522.354-16G221.03
lung, embryo E14.CNhs10604.404-26F832.76
lung, embryo E15.CNhs11020.432-17C548.72
lung, embryo E16.CNhs10998.458-17B655.15
lung, embryo E17.CNhs10605.480-44A661.98
lung, embryo E18.CNhs10583.1287-20I673.56
lung, neonate N00.CNhs11224.640-42C6101.86
lung, neonate N06.CNhs11212.683-20E5175.92
lung, neonate N07.CNhs11111.715-19A3181.16
lung, neonate N10.CNhs11219.750-23E6136.81
lung, neonate N20.CNhs11109.822-18A4191.23
lung, neonate N25.CNhs11119.1359-25C7145.75
lung, neonate N30.CNhs11133.1394-42H2136.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C219.75
medulla oblongata, neonate N30.CNhs11200.1396-42A315.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.68
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.34
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I738.47
ovary, embryo E18.CNhs11040.505-44H756.80
ovary, neonate N00.CNhs11217.1299-22I465.97
oviduct, adult pregnant day01.CNhs10500.988-6G662.19
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F442.24
pancreas, embryo E15.CNhs11042.1556-45F222.67
pancreas, embryo E16.CNhs11003.460-26E531.50
pancreas, embryo E17.CNhs10599.1558-45G331.60
pancreas, embryo E18.CNhs10580.1535-43I733.82
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D735.26
pancreas, neonate N02.CNhs11139.1539-43D830.66
pancreas, neonate N16.CNhs11136.787-43B622.75
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E619.81
pituitary gland, embryo E13.CNhs11009.370-44C712.94
pituitary gland, embryo E14.CNhs11037.398-44A518.00
pituitary gland, embryo E15.CNhs10592.427-16B925.89
pituitary gland, embryo E16.CNhs11036.449-43F623.37
pituitary gland, embryo E17.CNhs11039.1265-44F532.42
pituitary gland, neonate N00.CNhs11190.1308-22E922.23
placenta, adult pregnant day10.CNhs10472.539-13I743.41
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C314.84
skin, neonate N00.CNhs11124.650-25G424.38
skin, neonate N03.CNhs11215.662-22H320.39
skin, neonate N06.CNhs11097.693-20I517.79
skin, neonate N10.CNhs11108.762-6C414.94
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C143.13
spleen, embryo E18.CNhs11011.1271-21F266.48
spleen, neonate N10.CNhs11116.752-24D123.36
spleen, neonate N20.CNhs11112.824-19H19.30
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E344.92
stomach, embryo E15.CNhs10603.1252-16G842.49
stomach, embryo E16.CNhs11022.459-17D440.93
stomach, embryo E17.CNhs11006.1035-18D535.96
stomach, embryo E18.CNhs10999.1286-20C631.44
stomach, neonate N03.CNhs11193.1340-24B834.80
stomach, neonate N07.CNhs11210.718-18A935.13
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I16.87
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F565.34
testis, embryo E15.CNhs11034.443-27C562.21
testis, embryo E16.CNhs11033.470-26G587.11
testis, embryo E17.CNhs11029.486-18I570.00
testis, embryo E18.CNhs11027.503-18G569.27
testis, neonate N00.CNhs11189.1300-22B756.10
testis, neonate N07.CNhs11222.726-26I426.69
testis, neonate N10.CNhs11204.763-44D910.17
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I211.81
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G46.95
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B417.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F536.60
uterus, adult.CNhs10509.92-27E540.11
vagina, adult.CNhs10502.89-27D528.30
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A156.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A272.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A360.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A453.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A553.63
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A764.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A867.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.56
whole body, embryo E11.CNhs11014.324-5I818.68
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H233.81
whole body, embryo E14.5.CNhs10578.420-27D233.79
whole body, embryo E14.CNhs10519.395-14B128.72
whole body, embryo E16.CNhs10514.453-14F229.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G545.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G557.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G549.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G553.99
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G541.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G544.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G542.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G537.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G542.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G535.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.48
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G536.68
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G546.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G545.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G540.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G542.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G542.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G542.35
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G540.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G546.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G537.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G538.89
whole body, embryo E17.5.CNhs10513.490-9F943.79
whole body, embryo E17.CNhs10517.475-3I540.22
whole body, embryo E18.CNhs10516.493-3B333.22
whole body, neonate N00.CNhs10525.657-19C244.91
whole body, neonate N01.CNhs10576.659-23C635.39
whole body, neonate N06.CNhs10515.692-21D135.96
whole body, neonate N10.CNhs10518.761-6B435.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung2.87e-0814
respiratory tube2.87e-0814
respiration organ2.87e-0814
pair of lungs2.87e-0814
lung primordium2.87e-0814
lung bud2.87e-0814
tissue3.40e-07349
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:45190882..45190905,-&oldid=4225179"