Personal tools

FFCP PHASE1:Mm9::chr2:158492855..158492866,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=228852
|EntrezGene=228852
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VHQ3
|UniProt=Q8VHQ3
|association_with_transcript=0bp_to_ENSMUST00000045503_5end
|association_with_transcript=0bp_to_ENSMUST00000045503_5end
|cluster_id=chr2:158492855..158492866,+
|description=CAGE_peak_3_at_Ppp1r16b_5end
|description=CAGE_peak_3_at_Ppp1r16b_5end
|id=chr2:158492855..158492866,+
|id=chr2:158492855..158492866,+
|ontology_enrichment_celltype=CL:0000117!1.21e-09!23;CL:0000337!1.21e-09!23
|ontology_enrichment_celltype=CL:0000117!1.21e-09!23;CL:0000337!1.21e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.13e-12,23;CL:0000337,2.13e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.10e-14!34;UBERON:0007811!4.83e-13!86;UBERON:0001049!1.21e-12!52;UBERON:0005068!1.21e-12!52;UBERON:0006241!1.21e-12!52;UBERON:0007135!1.21e-12!52;UBERON:0002791!5.97e-12!29;UBERON:0003528!5.97e-12!29;UBERON:0001893!5.97e-12!29;UBERON:0000955!1.15e-11!50;UBERON:0006238!1.15e-11!50;UBERON:0002616!4.46e-11!49;UBERON:0000153!6.63e-11!94;UBERON:0003080!3.69e-09!40;UBERON:0000956!5.63e-09!21;UBERON:0001869!5.63e-09!21;UBERON:0000203!5.63e-09!21;UBERON:0001017!8.84e-09!73;UBERON:0005743!8.84e-09!73;UBERON:0000073!9.09e-09!75;UBERON:0001016!9.09e-09!75;UBERON:0000033!1.03e-08!63;UBERON:0002780!1.27e-08!39;UBERON:0001890!1.27e-08!39;UBERON:0006240!1.27e-08!39;UBERON:0002346!1.71e-08!71;UBERON:0003075!1.71e-08!71;UBERON:0007284!1.71e-08!71;UBERON:0000064!2.90e-08!99;UBERON:0002021!5.37e-08!10;UBERON:0000411!5.37e-08!10;UBERON:0001950!5.37e-08!10;UBERON:0003056!1.31e-07!49;UBERON:0000477!1.80e-07!154;UBERON:0002619!3.61e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.47e-20,34;UBERON:0000073,2.45e-20,54;UBERON:0001049,5.97e-19,52;UBERON:0005068,5.97e-19,52;UBERON:0006241,5.97e-19,52;UBERON:0007135,5.97e-19,52;UBERON:0003528,1.04e-16,29;UBERON:0002791,1.04e-16,29;UBERON:0001893,1.04e-16,29;UBERON:0001017,4.10e-16,73;UBERON:0001016,6.91e-16,75;UBERON:0000955,1.64e-15,47;UBERON:0006238,1.64e-15,47;UBERON:0002616,1.12e-14,46;UBERON:0002346,2.20e-13,64;UBERON:0003075,2.20e-13,64;UBERON:0007284,2.20e-13,64;UBERON:0003080,4.14e-13,40;UBERON:0000956,5.04e-13,21;UBERON:0001869,5.04e-13,21;UBERON:0000203,5.04e-13,21;UBERON:0002780,2.44e-12,39;UBERON:0001890,2.44e-12,39;UBERON:0006240,2.44e-12,39;UBERON:0002021,1.49e-10,10;UBERON:0000411,1.49e-10,10;UBERON:0001950,1.49e-10,10;UBERON:0002619,1.78e-10,17;UBERON:0010371,5.81e-10,73;UBERON:0004121,1.25e-09,95;UBERON:0000924,1.25e-09,95;UBERON:0006601,1.25e-09,95;UBERON:0003056,1.68e-09,49;UBERON:0011216,1.18e-07,194;UBERON:0000025,3.96e-07,114;UBERON:0000065,5.46e-07,41;UBERON:0000483,5.90e-07,174;UBERON:0003076,8.89e-07,12;UBERON:0003057,8.89e-07,12
|phase1_expression=0.160148847104794,1.04692622291808,1.81999695755814,1.81478526784098,0,0.671517087647559,0,2.45334314538995,7.88416844049334,8.19225842126977,4.10923123741212,4.54701306273417,1.88320802924326,1.92324885321794,1.33243904726265,1.21485160433896,0,3.47008381894061,5.89592064504677,3.39511721438424,2.46625541438102,0.794327609607082,0.522399578277871,0,0.45881856213434,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,1.45072428402269,3.6970317905671,0,0,0,2.83243045203437,2.64495489636016,1.26766280701236,0,0,0,0,0,0.599200221036809,1.15265491596466,2.48855069540346,3.51015439662396,3.15487442027073,7.9982275633065,5.74258206474195,1.71487118900936,2.1086003624012,1.83843757322004,6.60695285996332,3.95830748064082,3.99376986466233,1.97829431595291,2.47016637726506,0.52091337055676,4.4669279840221,4.50210088025344,4.73674568108111,4.71405736757868,5.97961059356232,4.10078780815661,1.13589289999776,0.377857800533928,3.18850937571846,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,8.54495016035667,0.593768556259299,0.520455980298408,0.913396434936424,0,0.301445281105245,0.823120949949934,0.753999547978053,0.494389935468748,0,0,0.323533699894818,0.441683036920787,0,0,5.85561594023094,6.49284791121711,0.255457055208591,0.479260498023681,0.599902730993408,0,8.83764772488454,26.992535566299,6.78533501409468,13.5582969749976,9.97290283588289,6.85700547046548,8.27430441645564,0.611036183101898,0.373220911830279,0.252722758433675,0.631325567659422,0.390361328888111,0.229902104433473,0.180062129805349,0,0.748401490664606,0.640568601424249,0.468508622798644,2.32833033665114,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0,2.18937693500343,0,0,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0.116765342367169,0.658239399653922,0.985004784474571,1.29710095273369,0.438599962275997,0.439100230582101,1.47627060636409,9.67333763394985,4.32199371992995,1.32167513193519,0.793351699990633,0.639864751605702,0.464473343720877,0,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0,0,0,0.597423819763102,1.13800740571849,0.799739588268102,0,0.814605311381257,0.969762435838129,0.98190147846446,0.379419222745544,0.885660887877613,0.784993639206874,0.493588655687202,0,0,0.393117990226406,0,0.608580364165509,0,0,0,0.486405680325106,0,0,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,2.03228509183265,0.189491411770485,0.162964976442026,0.339490171550376,0.938760993154008,2.34508760418542,3.09456733151818,2.34160377429359,2.99506773801763,1.7717175171902,2.87018583583477,2.78567635016755,2.41758974612254,3.47157740595628,0,0,0,0,4.81651769963376,6.56385444916338,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,10.9249247583414,1.41940085208269,0.35613120733451,0.162886959353576,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0,0.658196082408484,0.304464949114599,0,0.847328283455281,0,0.49465875882444,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,0,5.19190845629427,0.683483523191411,0.619160603889667,0.555583582109135,0.565105371014073,0.820165366326151,2.28778173206523,1.5298058699447,1.6794174278839,1.10559979043539,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,0.56369293868419,2.24274819065968,2.31641886639937,2.33341426012857,3.22899558694328,3.04121025883401,3.0512882047896,3.6457227756306,3.46035836604846,0.966336483304024,0.864090018773596,3.16011120628178,1.21635129174099,0.616265742988964,0.649604114888975,2.14832034800978,1.98681354781265,1.68273629327956,2.51072196196781,2.42319479875554,2.74344503957999,2.82313318383153,3.02119430293232,2.79014340756955,2.68816875017609,0,0,0.358855426437903,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,6.7770221114048,10.1271552031579,10.3121192419091,7.56154002312225,10.9613203163303,13.5970901530146,12.1504050041725,8.10578165803597,9.5159905886683,10.3552062350364,0.103787347584177,0,0.341467211508268,0.486213434136588,0.419226325255965,0.551530525350042,1.33348036680969,1.03017528619447,1.60459604795908,1.26348605881899,1.77435509923168,0.377252682772152,0.561849044819294,0.704276676453562,0.918967503289812,0,1.0429589335037,0,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,1.43061713968393,0.872078499793971,0.658765662907314,0.846146078916765,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,1.42362021749009,0.492522411877817,0.409231043169689,1.08455788830176,0.964533054905707,1.99848462350357,0.467863216890817,1.07435527024149,0.956441660344217,0,0.695603506861264
|phase1_expression=0.160148847104794,1.04692622291808,1.81999695755814,1.81478526784098,0,0.671517087647559,0,2.45334314538995,7.88416844049334,8.19225842126977,4.10923123741212,4.54701306273417,1.88320802924326,1.92324885321794,1.33243904726265,1.21485160433896,0,3.47008381894061,5.89592064504677,3.39511721438424,2.46625541438102,0.794327609607082,0.522399578277871,0,0.45881856213434,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36904339384756,1.45072428402269,3.6970317905671,0,0,0,2.83243045203437,2.64495489636016,1.26766280701236,0,0,0,0,0,0.599200221036809,1.15265491596466,2.48855069540346,3.51015439662396,3.15487442027073,7.9982275633065,5.74258206474195,1.71487118900936,2.1086003624012,1.83843757322004,6.60695285996332,3.95830748064082,3.99376986466233,1.97829431595291,2.47016637726506,0.52091337055676,4.4669279840221,4.50210088025344,4.73674568108111,4.71405736757868,5.97961059356232,4.10078780815661,1.13589289999776,0.377857800533928,3.18850937571846,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,8.54495016035667,0.593768556259299,0.520455980298408,0.913396434936424,0,0.301445281105245,0.823120949949934,0.753999547978053,0.494389935468748,0,0,0.323533699894818,0.441683036920787,0,0,5.85561594023094,6.49284791121711,0.255457055208591,0.479260498023681,0.599902730993408,0,8.83764772488454,26.992535566299,6.78533501409468,13.5582969749976,9.97290283588289,6.85700547046548,8.27430441645564,0.611036183101898,0.373220911830279,0.252722758433675,0.631325567659422,0.390361328888111,0.229902104433473,0.180062129805349,0,0.748401490664606,0.640568601424249,0.468508622798644,2.32833033665114,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0,2.18937693500343,0,0,0,0.828503090142008,0.234526059981096,0,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0.116765342367169,0.658239399653922,0.985004784474571,1.29710095273369,0.438599962275997,0.439100230582101,1.47627060636409,9.67333763394985,4.32199371992995,1.32167513193519,0.793351699990633,0.639864751605702,0.464473343720877,0,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.198956472041151,0,0,0,0.597423819763102,1.13800740571849,0.799739588268102,0,0.814605311381257,0.969762435838129,0.98190147846446,0.379419222745544,0.885660887877613,0.784993639206874,0.493588655687202,0,0,0.393117990226406,0,0.608580364165509,0,0,0,0.486405680325106,0,0,1.11642284300551,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,2.03228509183265,0.189491411770485,0.162964976442026,0.339490171550376,0.938760993154008,2.34508760418542,3.09456733151818,2.34160377429359,2.99506773801763,1.7717175171902,2.87018583583477,2.78567635016755,2.41758974612254,3.47157740595628,0,0,0,0,4.81651769963376,6.56385444916338,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,10.9249247583414,1.41940085208269,0.35613120733451,0.162886959353576,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0,0.354680467284547,0,0.658196082408484,0.304464949114599,0,0.847328283455281,0,0.49465875882444,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,0,5.19190845629427,0.683483523191411,0.619160603889667,0.555583582109135,0.565105371014073,0.820165366326151,2.28778173206523,1.5298058699447,1.6794174278839,1.10559979043539,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,0.56369293868419,2.24274819065968,2.31641886639937,2.33341426012857,3.22899558694328,3.04121025883401,3.0512882047896,3.6457227756306,3.46035836604846,0.966336483304024,0.864090018773596,3.16011120628178,1.21635129174099,0.616265742988964,0.649604114888975,2.14832034800978,1.98681354781265,1.68273629327956,2.51072196196781,2.42319479875554,2.74344503957999,2.82313318383153,3.02119430293232,2.79014340756955,2.68816875017609,0,0,0.358855426437903,0,0.386379188064381,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,6.7770221114048,10.1271552031579,10.3121192419091,7.56154002312225,10.9613203163303,13.5970901530146,12.1504050041725,8.10578165803597,9.5159905886683,10.3552062350364,0.103787347584177,0,0.341467211508268,0.486213434136588,0.419226325255965,0.551530525350042,1.33348036680969,1.03017528619447,1.60459604795908,1.26348605881899,1.77435509923168,0.377252682772152,0.561849044819294,0.704276676453562,0.918967503289812,0,1.0429589335037,0,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,1.43061713968393,0.872078499793971,0.658765662907314,0.846146078916765,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,1.42362021749009,0.492522411877817,0.409231043169689,1.08455788830176,0.964533054905707,1.99848462350357,0.467863216890817,1.07435527024149,0.956441660344217,0,0.695603506861264
|short_description=p3@Ppp1r16b
|short_description=p3@Ppp1r16b
}}
}}

Latest revision as of 01:20, 26 September 2015

Short description:p3@Ppp1r16b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ppp1r16b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000045503_5end
EntrezGene:Ppp1r16b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ppp1r16b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.13e-1223
neuroblast (sensu Vertebrata)2.13e-1223

Uber anatomy
Ontology termp-valuen
gray matter1.47e-2034
regional part of nervous system2.45e-2054
neural tube5.97e-1952
neural rod5.97e-1952
future spinal cord5.97e-1952
neural keel5.97e-1952
brain grey matter1.04e-1629
regional part of telencephalon1.04e-1629
telencephalon1.04e-1629
central nervous system4.10e-1673
nervous system6.91e-1675
brain1.64e-1547
future brain1.64e-1547
regional part of brain1.12e-1446
neurectoderm2.20e-1364
neural plate2.20e-1364
presumptive neural plate2.20e-1364
anterior neural tube4.14e-1340
cerebral cortex5.04e-1321
cerebral hemisphere5.04e-1321
pallium5.04e-1321
regional part of forebrain2.44e-1239
forebrain2.44e-1239
future forebrain2.44e-1239
occipital lobe1.49e-1010
visual cortex1.49e-1010
neocortex1.49e-1010
regional part of cerebral cortex1.78e-1017
ecto-epithelium5.81e-1073
ectoderm-derived structure1.25e-0995
ectoderm1.25e-0995
presumptive ectoderm1.25e-0995
pre-chordal neural plate1.68e-0949
organ system subdivision1.18e-07194
tube3.96e-07114
respiratory tract5.46e-0741
epithelium5.90e-07174
posterior neural tube8.89e-0712
chordal neural plate8.89e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:158492855..158492866,%2B&oldid=4225178"