FFCP PHASE1:Mm9::chr2:158436714..158436784,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22348|HGNC=|MCL_coexpression_id=1|UniProt=O35633|association_with_transcript=211bp_to_ENSMUST00000045738_5end|description=CAGE_peak_1_at_Slc32a1_5end|id=chr2:158436714..158436784,+|ontology_enrichment_celltype=CL:0000117!2.76e-17!23;CL:0000337!2.76e-17!23;CL:0000540!3.96e-09!33;CL:0000047!3.96e-09!33;CL:0000031!3.96e-09!33;CL:0000404!3.96e-09!33;CL:0002319!9.56e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-20,23;CL:0000337,2.30e-20,23;CL:0000540,1.27e-11,33;CL:0000047,1.27e-11,33;CL:0000031,1.27e-11,33;CL:0000404,1.27e-11,33;CL:0000393,1.20e-08,39;CL:0000211,1.20e-08,39;CL:0002319,1.78e-08,43;CL:0000221,4.15e-08,44;CL:0000133,4.15e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.55e-27!52;UBERON:0005068!4.55e-27!52;UBERON:0006241!4.55e-27!52;UBERON:0007135!4.55e-27!52;UBERON:0000033!2.77e-26!63;UBERON:0000955!1.47e-25!50;UBERON:0006238!1.47e-25!50;UBERON:0002346!3.99e-25!71;UBERON:0003075!3.99e-25!71;UBERON:0007284!3.99e-25!71;UBERON:0002616!1.25e-24!49;UBERON:0001017!2.27e-24!73;UBERON:0005743!2.27e-24!73;UBERON:0000073!4.24e-23!75;UBERON:0001016!4.24e-23!75;UBERON:0003056!5.39e-23!49;UBERON:0002020!1.15e-21!34;UBERON:0004121!7.03e-20!102;UBERON:0000924!7.03e-20!102;UBERON:0006601!7.03e-20!102;UBERON:0003080!3.29e-19!40;UBERON:0002780!2.35e-18!39;UBERON:0001890!2.35e-18!39;UBERON:0006240!2.35e-18!39;UBERON:0002791!1.56e-17!29;UBERON:0003528!1.56e-17!29;UBERON:0001893!1.56e-17!29;UBERON:0007811!9.88e-15!86;UBERON:0000153!2.62e-12!94;UBERON:0000956!1.92e-11!21;UBERON:0001869!1.92e-11!21;UBERON:0000203!1.92e-11!21;UBERON:0002619!1.84e-09!17;UBERON:0002021!1.50e-08!10;UBERON:0000411!1.50e-08!10;UBERON:0001950!1.50e-08!10;UBERON:0003076!2.18e-08!12;UBERON:0003057!2.18e-08!12;UBERON:0002420!1.74e-07!8;UBERON:0007245!1.74e-07!8;UBERON:0010009!1.74e-07!8;UBERON:0010011!1.74e-07!8;UBERON:0000454!1.74e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.57e-29,54;UBERON:0002346,7.48e-28,64;UBERON:0003075,7.48e-28,64;UBERON:0007284,7.48e-28,64;UBERON:0001049,2.27e-27,52;UBERON:0005068,2.27e-27,52;UBERON:0006241,2.27e-27,52;UBERON:0007135,2.27e-27,52;UBERON:0001017,2.54e-26,73;UBERON:0002020,6.31e-26,34;UBERON:0001016,4.03e-25,75;UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0000955,1.68e-22,47;UBERON:0006238,1.68e-22,47;UBERON:0010371,3.13e-22,73;UBERON:0003056,1.11e-21,49;UBERON:0002616,1.76e-21,46;UBERON:0003528,5.79e-21,29;UBERON:0002791,5.79e-21,29;UBERON:0001893,5.79e-21,29;UBERON:0003080,3.77e-19,40;UBERON:0002780,3.51e-18,39;UBERON:0001890,3.51e-18,39;UBERON:0006240,3.51e-18,39;UBERON:0010314,3.68e-14,92;UBERON:0000956,1.18e-13,21;UBERON:0001869,1.18e-13,21;UBERON:0000203,1.18e-13,21;UBERON:0002619,2.78e-11,17;UBERON:0002021,6.41e-10,10;UBERON:0000411,6.41e-10,10;UBERON:0001950,6.41e-10,10;UBERON:0003076,9.08e-09,12;UBERON:0003057,9.08e-09,12;UBERON:0002420,1.20e-08,8;UBERON:0007245,1.20e-08,8;UBERON:0010009,1.20e-08,8;UBERON:0010011,1.20e-08,8;UBERON:0000454,1.20e-08,8;UBERON:0002240,2.87e-07,6;UBERON:0005174,2.87e-07,6;UBERON:0001137,2.87e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8561255688249,0.198581902401771,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,47.3420518411459,62.4209355540999,51.9741750875067,0,0,1.3498495759221,2.96659908770092,0.7104801149461,2.39680088414724,3.84218305321555,6.22137673850866,6.88530285491622,6.09942387919008,162.24975914136,152.620161797565,45.444086508748,36.8046608710028,36.7687514644008,224.636397238753,140.839133907962,181.409315775624,42.3354983613922,35.3142304305301,36.98484930953,209.108066252034,109.738708956178,124.836168433654,134.645263561466,102.080495132957,56.6654315308914,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,99.545470983926,104.932800113541,0,0,0,0,160.725356081375,338.092945482965,114.596769126932,85.5215655346,75.1803444551172,185.346935747128,157.860748964928,0,0,0,12.6265113531884,0.520481771850815,0.459804208866946,2.34080768746954,2.10986744970001,6.66757691683013,7.94305065766069,10.7756983243688,40.6164292060255,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,54.8856765752372,21.3012547625119,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.367136304764,167.729923513443,0,0,0,0,0,0,0,0,0,0,0,177.048045348416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,1.8006109403131,2.19909762430683,0.428674070063185,0,0.356737635204141,0.493647061806363,0,0,0,0,0,0.161464426695906,0,0,0,0,187.279555030615,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0.777804753376191,0.904118764344118,0.675824501963113,0,0.2604087696879,0.524296722128554,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,94.3135577170501,79.1759406792344,79.6324763680761,74.5842811371604,84.265149931789,74.0286019441907,62.7770925215579,82.8591013932566,61.1742252128676,82.8416498802912,1.14166082342594,5.98537310101547,5.29274177837816,3.8897074730927,5.24032906569956,8.08911437180062,6.22290837844523,8.03536723231687,8.02298023979538,8.84440241173291,8.36481689637791,6.22466926574051,5.43120743325318,6.40251524048693,6.08815970929501,7.62069906052918,8.80720877180902,6.17309505483856,6.59337441285291,6.03515572551029,7.20025430009372,4.96932257246145,5.48403236878838,5.81385666529314,5.36423468367385,6.59993941555077,5.85369513192872,4.99832451731901,5.83957689537206,9.53941861818155,6.8808310512021,5.81176446015824,5.72923460437565,4.49316839439301,4.43685205256625,21.2338991247254,7.01794825336225,8.59484216193193,6.12122662620299,3.08827986767322,1.15933917810211|short_description=p1@Slc32a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22348 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=O35633 | |||
|association_with_transcript=211bp_to_ENSMUST00000045738_5end | |||
|cluster_id=chr2:158436714..158436784,+ | |||
|description=CAGE_peak_1_at_Slc32a1_5end | |||
|id=chr2:158436714..158436784,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.76e-17!23;CL:0000337!2.76e-17!23;CL:0000540!3.96e-09!33;CL:0000047!3.96e-09!33;CL:0000031!3.96e-09!33;CL:0000404!3.96e-09!33;CL:0002319!9.56e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-20,23;CL:0000337,2.30e-20,23;CL:0000540,1.27e-11,33;CL:0000047,1.27e-11,33;CL:0000031,1.27e-11,33;CL:0000404,1.27e-11,33;CL:0000393,1.20e-08,39;CL:0000211,1.20e-08,39;CL:0002319,1.78e-08,43;CL:0000221,4.15e-08,44;CL:0000133,4.15e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.55e-27!52;UBERON:0005068!4.55e-27!52;UBERON:0006241!4.55e-27!52;UBERON:0007135!4.55e-27!52;UBERON:0000033!2.77e-26!63;UBERON:0000955!1.47e-25!50;UBERON:0006238!1.47e-25!50;UBERON:0002346!3.99e-25!71;UBERON:0003075!3.99e-25!71;UBERON:0007284!3.99e-25!71;UBERON:0002616!1.25e-24!49;UBERON:0001017!2.27e-24!73;UBERON:0005743!2.27e-24!73;UBERON:0000073!4.24e-23!75;UBERON:0001016!4.24e-23!75;UBERON:0003056!5.39e-23!49;UBERON:0002020!1.15e-21!34;UBERON:0004121!7.03e-20!102;UBERON:0000924!7.03e-20!102;UBERON:0006601!7.03e-20!102;UBERON:0003080!3.29e-19!40;UBERON:0002780!2.35e-18!39;UBERON:0001890!2.35e-18!39;UBERON:0006240!2.35e-18!39;UBERON:0002791!1.56e-17!29;UBERON:0003528!1.56e-17!29;UBERON:0001893!1.56e-17!29;UBERON:0007811!9.88e-15!86;UBERON:0000153!2.62e-12!94;UBERON:0000956!1.92e-11!21;UBERON:0001869!1.92e-11!21;UBERON:0000203!1.92e-11!21;UBERON:0002619!1.84e-09!17;UBERON:0002021!1.50e-08!10;UBERON:0000411!1.50e-08!10;UBERON:0001950!1.50e-08!10;UBERON:0003076!2.18e-08!12;UBERON:0003057!2.18e-08!12;UBERON:0002420!1.74e-07!8;UBERON:0007245!1.74e-07!8;UBERON:0010009!1.74e-07!8;UBERON:0010011!1.74e-07!8;UBERON:0000454!1.74e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.57e-29,54;UBERON:0002346,7.48e-28,64;UBERON:0003075,7.48e-28,64;UBERON:0007284,7.48e-28,64;UBERON:0001049,2.27e-27,52;UBERON:0005068,2.27e-27,52;UBERON:0006241,2.27e-27,52;UBERON:0007135,2.27e-27,52;UBERON:0001017,2.54e-26,73;UBERON:0002020,6.31e-26,34;UBERON:0001016,4.03e-25,75;UBERON:0004121,1.13e-22,95;UBERON:0000924,1.13e-22,95;UBERON:0006601,1.13e-22,95;UBERON:0000955,1.68e-22,47;UBERON:0006238,1.68e-22,47;UBERON:0010371,3.13e-22,73;UBERON:0003056,1.11e-21,49;UBERON:0002616,1.76e-21,46;UBERON:0003528,5.79e-21,29;UBERON:0002791,5.79e-21,29;UBERON:0001893,5.79e-21,29;UBERON:0003080,3.77e-19,40;UBERON:0002780,3.51e-18,39;UBERON:0001890,3.51e-18,39;UBERON:0006240,3.51e-18,39;UBERON:0010314,3.68e-14,92;UBERON:0000956,1.18e-13,21;UBERON:0001869,1.18e-13,21;UBERON:0000203,1.18e-13,21;UBERON:0002619,2.78e-11,17;UBERON:0002021,6.41e-10,10;UBERON:0000411,6.41e-10,10;UBERON:0001950,6.41e-10,10;UBERON:0003076,9.08e-09,12;UBERON:0003057,9.08e-09,12;UBERON:0002420,1.20e-08,8;UBERON:0007245,1.20e-08,8;UBERON:0010009,1.20e-08,8;UBERON:0010011,1.20e-08,8;UBERON:0000454,1.20e-08,8;UBERON:0002240,2.87e-07,6;UBERON:0005174,2.87e-07,6;UBERON:0001137,2.87e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8561255688249,0.198581902401771,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,47.3420518411459,62.4209355540999,51.9741750875067,0,0,1.3498495759221,2.96659908770092,0.7104801149461,2.39680088414724,3.84218305321555,6.22137673850866,6.88530285491622,6.09942387919008,162.24975914136,152.620161797565,45.444086508748,36.8046608710028,36.7687514644008,224.636397238753,140.839133907962,181.409315775624,42.3354983613922,35.3142304305301,36.98484930953,209.108066252034,109.738708956178,124.836168433654,134.645263561466,102.080495132957,56.6654315308914,0,0,0,0,0,0,0,0,5.33688796500657,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,99.545470983926,104.932800113541,0,0,0,0,160.725356081375,338.092945482965,114.596769126932,85.5215655346,75.1803444551172,185.346935747128,157.860748964928,0,0,0,12.6265113531884,0.520481771850815,0.459804208866946,2.34080768746954,2.10986744970001,6.66757691683013,7.94305065766069,10.7756983243688,40.6164292060255,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,54.8856765752372,21.3012547625119,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,200.367136304764,167.729923513443,0,0,0,0,0,0,0,0,0,0,0,177.048045348416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,1.8006109403131,2.19909762430683,0.428674070063185,0,0.356737635204141,0.493647061806363,0,0,0,0,0,0.161464426695906,0,0,0,0,187.279555030615,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0.777804753376191,0.904118764344118,0.675824501963113,0,0.2604087696879,0.524296722128554,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,94.3135577170501,79.1759406792344,79.6324763680761,74.5842811371604,84.265149931789,74.0286019441907,62.7770925215579,82.8591013932566,61.1742252128676,82.8416498802912,1.14166082342594,5.98537310101547,5.29274177837816,3.8897074730927,5.24032906569956,8.08911437180062,6.22290837844523,8.03536723231687,8.02298023979538,8.84440241173291,8.36481689637791,6.22466926574051,5.43120743325318,6.40251524048693,6.08815970929501,7.62069906052918,8.80720877180902,6.17309505483856,6.59337441285291,6.03515572551029,7.20025430009372,4.96932257246145,5.48403236878838,5.81385666529314,5.36423468367385,6.59993941555077,5.85369513192872,4.99832451731901,5.83957689537206,9.53941861818155,6.8808310512021,5.81176446015824,5.72923460437565,4.49316839439301,4.43685205256625,21.2338991247254,7.01794825336225,8.59484216193193,6.12122662620299,3.08827986767322,1.15933917810211 | |||
|short_description=p1@Slc32a1 | |||
}} |
Latest revision as of 01:18, 26 September 2015
Short description: | p1@Slc32a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc32a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 211bp_to_ENSMUST00000045738_5end |
EntrezGene: | Slc32a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.30e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-20 | 23 |
neuron | 1.27e-11 | 33 |
neuronal stem cell | 1.27e-11 | 33 |
neuroblast | 1.27e-11 | 33 |
electrically signaling cell | 1.27e-11 | 33 |
electrically responsive cell | 1.20e-08 | 39 |
electrically active cell | 1.20e-08 | 39 |
neural cell | 1.78e-08 | 43 |
ectodermal cell | 4.15e-08 | 44 |
neurectodermal cell | 4.15e-08 | 44 |